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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000051:922972..929250+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg01352.1 ID=Blg01352.1|Name=Blg01352.1|organism=Branchiostoma lanceolatum|type=mRNA|length=6279bp|location=Sequence derived from alignment at Sc0000051:922972..929250+ (Branchiostoma lanceolatum)
CTGGAATGTTGTTGCGGAACCTTTGATTTCGTATATATGATTTCTTACCT
TGTCCATTTCACTATCTAATCGAGATTGTTTGAGCTGTATCTAAAACGGA
GTTGTTATAATGTTTGTTACTGCCTGTTCACCGAAAATCTAGGTCAGTAT
TAATTTGATAAACCTGGAATTTTGTTGCGCCACCACATTTAAATTTGTGA
GTATGGCTCCCGCGGGTGCGCGCCTGAGCTGGTTTCAGTAGACTGTCAGT
GTTTATATTGATGTGGTTGTTGACTAGTTTGTGGAGAAAGGTGAGGCGGG
CGTTCCTCCTCCTTTCAGAGAGAGTTATAATGTTTGTGCCCGCCTGCACG
GTTCGCAGAATATCTAGGTCATCAATTAAATCTGTANCACGGTTCGCAGA
ATATCTAGGTCACTATTTAAACCTGTAATTTCATTGCGTGCAGGTAAACA
AGAAGAATGGCGGACACTACCGTAGTAGACGTCAAACTGAGTGATACCCT
TTGCCACGGTGCACAGAAACATGGCATGACCAGGGAAGAAGTCTTCAGGT
ATTATGACAACTGGGCCGACAGGTATGACAAGGTACGGAACGTCTCTTTT
CATCTCGGATATTCACCCCGACCAATCAAACCACGTGAATCGCATTGAAA
CTCAGATTCGTATCAGCCGCGATTTAACGTTTAGAAAAAAATAGTTTCTA
CTACTTTTTTCTAAACGTTAAATCGCGGTCGCTTTCAATCACTTCCAAAG
TGCCAAAATTGCCAATCTGAAAACTTCTTTGGAAAGCTGACACCTTCCAC
CATCTCACTGGCGAGTTTGTTTAGTCAGATGTAGTCGTTAACGCAAGTTA
GAAAGGGATTTGTCGGGAAATGGCTGATACGAATCTGAGTTTCAATGCGA
TTCACGTGGTTTGATTGGTCGGGGTGATATTGCGCTTTCTTTCAATGAGC
GCCTTCGTAGATTCGAGTACGCATGTGCAGTGTCAAAGGTGGAGGCCCCT
GAGACGTAAACAAAACCCGTCTGGGATTTATTGTAGACTGTCCTTTGTAT
GATAGCGATAGAATAATTCTTTTCAGTTAGGTGTTAAGTAAATTCCCCCA
CTTTAGATACCTGAATAGTAGAGAGAAATTTATATTTCTTGCAGCCAACT
CTAACTAATCACACATCCTCCTACATTTATACAATTACCAAGAAGCGAGA
GGAAGTCGAAAATACATGAGTATGCTAGATGTTTATATACAGTAATACTC
GTGAATATGTATATATTTGTTAACATGTGACCTGTGCTTAGCCCAGTGGG
GCAAACATGTACAATAAAGGTCTTCATTCATTGTTATGAAAATCGAGACA
GTGGTCGAGACAGAACTGTTTGCAAGCCAAGTGGCTTCACTTTTGACACT
GCAAATGCGTACTCGAATCTACGAAAGCGCTTATAGATTGTGGCGGCTTT
ACCTTAAGACCTGGGAGAATGATTCAGCTTAATCCTCTTTCGCGACTTTT
CCAATCAGCTTTATACCTTCCACACCACGTAAACACGACAACAGATCGTT
TAATATTTCCATTGAGGAAAAAGACACAGCAATACTCCAAAGACAAATAC
TCAGCCCCTCCCAAAACAGGATAATGAATTGATATAAGCTAAAGTGGACT
GATTTTAGCCGTAGGAAGAGAAAGGAGACACCACAGTTTATTTTGTCTGA
CTTGTATTGCATTACTGCGTTGTTCAAGCGTTGTAATACAATGAAAATCA
TATCTACGCTGTGGCCGCGAATACTTCGCGACTTACAGTACTAGTAAATC
TGCACCTAAACTGACAAGGCAAATGAAAATTCTACCGTTTTGTCTGTAGG
ACCTATTTGATCTGAACTACGGCGGTCCCCGCCAGTGTGCCGAGGCTCTA
GCGGAGGTCCTGTCAGGGAACAAGACTGCAAGGATCCTGGACGTAGCCGC
CGGAACGGGCCTGTGTGCAATGGAGGTAAGGCAACTATCACCTGGAGTCC
AGCCATGTTCGCTTTGGTTCACTGTTGGCGGGGTCGTGACGTTGGGAGCG
CGCCAAAGCTGGCGAGGCTGGACTCCAGGCTAATGCTTTGATCCCAATTG
CGCCGGTGCCCATAGTAGTGTAGTCCTGGCCAGGCCCCGAAGCCAGAAAT
TTGTCTCGGTGGACTGCCGTGTACCGGGGAGGGGGGTGGTACCTTCTAGT
GTTCGCACGATTAGCTCACGGCGTCTATTTGTAACAGGGTCCCGCTTTGA
ATTTAAGTCCGGATTAAAGTCACCGCGGGGCCCGGCCGGGCCCAAAGCCG
CAGGGTGTCCCACGGGGCCACGTAGGGGTCACGCTCGAAAGTGAAAAAAA
AACTGCCCGTGAACTACCCGGCAGGGCTCCCTTTTCCAATTGTGACCGAA
GCACATCAAAGGCAACCATGCTCGGTCTATTGACCTAGTTATCGTCACAA
GGTCGCAAAACACAGTGTTCATCCGCGACCGCGGGGTCGGTGGTAAAAAA
ATTAGTGCGACAAAAATCGTGAACGCTTCTAGAATTCTTTACGTGAAAGC
CGATTAACAAGACAGGAACTGTCCTATAAGGTAGACGTATAAGCATGCCT
TTAGATCGCATGAATACGGTAATGATTGTTAACGTTAGGACCCTGTCACA
CTTGTGCGTATATGCAAGTCCGCATGAGTTGCGTATTAGCAAGTTTTTGT
TGTAGGTTAAGTTTGCAGCCGAAGAAGTCATTTCTTTGGTCCGATAAGTA
GACTGCACAACGATGGGCAAAGTAGAAAACAACTTCTTCCCTGCAAACTT
TACATAAACCAAAAAAAAATGTTCATGCGCAACTCATACGCACTTGAAAA
TGCGCACAAGTGTGACAGGGCCTTTAAGCTTGCTCAGTCTGCGTAGAAAA
CACTGGATATCGCAACATCCAGTTTCATAAGTTGATTTTTTAATCCCTCC
TGAAGCTGATCAAGTTGGGCTACACCAACCTGGATGCGATCGACGGCAGC
CAGGGCATGTTAGACATCGCCAAGTCCAGGAACCTGTACCACAGGTACAT
CTGTGACTTCCTGGGACCACGGCGCCTCGACATAGAGGACGGTAAGTGTG
AGGGTGACGATTCCTGTAGCTATGTTTTAGAAATGAGTCCTTATAAACTG
GCCAATAGTTTCAACAGGTCGGTAAATCAGTGTATAGCAAAGTTTTTGGT
ACACAACCAGAGAGATGATAAGGCCAAGCCGACGTTCTAGTGACCGTCTG
TCACCCTTCACAGGACAAACCTGACTTGTTCTACCTCGCGCTGCAGCTAG
GTGTCGCTGCTGCAGTGTCAACAGTGCGGTCCCCTACGTGACTGACTTTA
TATCTCCCTCATCACGTGTCATGACTGGAGCAGATTTGTTTTATCCATGC
CGCCTCCATAATCCGACAAGTGCCTCACCTTGGCCCCGTCCCGGTCTCTT
ACACAGTTGTTTCTTGTACAGTAGGCGCCACTTAATTGCACCTCGGATAA
ACGCACATTCCATTTAACTGCACCGAATCCCAAAATCCAAAACCGGTTCC
CATTCACTGCATTGTTAGTGACTCCGCATATCTGCACGGTGCATTGTCAC
CAATGCCGGATAACTGCACTAATTTGTTTCAAAAATCCTTATGGTTAACT
AAAAAGGTGCGCTAAAAATCAGAAAACGCGGTACAAATGAGCCTATACGT
CCCTATATAGAGTCACAATACCGCCAATATGTCTAAAATTGTTTTCACTA
ACAAAACAAGGTGGTCTCCATTGACAATCACGTTGATAGCGATCGTATGG
GATGTCCTGGGTGGGTCACGGGACGTGGCGTCACCATCAAGAGACACACG
CCTGCCAAAGGCGGCATTGCGCTTTGGCAGACAGCATGCTGTACTCAAAA
AAGATTTGATCTCTACCTCTACACTAGCTGTCTTATAACTGTGAATGCAT
TTAAGTTCGCGGGGATTTGATTTCGCGTTAAAGATGACATGGGTGTTGTC
GGTGGTTTGGGGTTCGCGGCAGCGCTATATTCACATACTGCTGCAATAAT
GAGACCGGCGTCTTAACGTACATCTAGTCGCAGTTCTCAGGTCTAATCGG
AAACCGCACAGCGACTCGAGAAGGGCTACAGACGCGTGGACGGACATAGC
AGTCGCTTTTGACGGTGCGGTGCTGACGTCATCATCTGTCAAATTCTTTT
ATGGCACAGCTGAATCTGCGTCCTAGAAGCTTCCTACATTCACCCGAAGG
ATGTATGCGTGGGTTCAGCTCTGCTATAAGGAGAATGGTCTGTCACTGAT
CGAAGTCATCTAACCATATCTACCCACTGGATACGTAGTACAGTCCATTG
TACAGTTATTCACTACAATGATGTACACAGTCTAATCTGTCCAAACATGA
CAGGGGCCTCTCTGGCGCTTACTGATTTCACTCACTGTGTCCTGAGATGT
CTTTCCTGAGAATTTGACATTTACTGTTTTAATACATAAACGTGGCCCTA
ACAAGAGGTGGAATCTACGGTGTTACTGCACTGTACCTGTATAACGAAAG
CTTTCTAACATCTAAATGCGTACTGACAAGTCCATACAGCACACCGAGGT
TTATAAACTATTCACCTCTTGTATGATACAGTGTACTATCGGTCCAGCGG
GGCAATTTCGCATAATTGCACCAGCCGGATAATTGCACCAAATACGCTTG
CAAATGGGGTGTGCAGTTAAGCAGATTCTACTGTAATATAATATGGTCCT
GTCACTGCTGATGTATCGCCAATTAAGAAATCTAATAATCGTATAATAGT
GTCCAACAACTGTTAATGCGTACAATGCAGCGTTGCCATATATTGTACAT
TCTCAGCGCAGCTATATTTGTCTGTATACGTGTAGTGTTGGAAGTGTCGT
ATGGATCAGGTGGTGAAGTTTGCCATCTTTGATTGCCTTGTAGACGTTGC
CATGTGTGTGTTTGTGGTCATAAACTTGCACTAAAACGGATACCACAAAG
ACATAACAGGATGACCTGAAAGGCACTTATCTAGAGCACGTGTACTGAGA
CAACGAAACTGTCTACGTTTCAGACCACTATGACGCCATCGCTTGCTGCG
GTTCGTTCAGCCAAGGTCACTTGAAGGACGACTGTCTTCCGGAGCTCATC
CGTATCGTTAAGCCAGGTAAGGTGAAAGCTTCTTGTTCTGTGACGAGGCT
AAAGAAGACTGAAATAAATCGACTACTTAGACATGTATTTTCAATCGCGG
GGGCAGACTTGTTGTGAGCCTCAAGTAGTAAAATCCTTTGCTCAAACCCG
ATTATTTTTTTACACAATTAACAGATTTGTTGTTACATTGTGGCCTTTTC
GCAGAAGATCCTCCAAGGCTAGTAATCTTCCTTTTCCGTCCTGAGAATTT
AAGTATCATTGAATAACCATCACGGTTGGGACCGCATCCTTCTCGGAGCG
GGGCCACCTAGTAATTTGAGTCAGTATTACTGCTCCTACAAGTTAGCAGA
CGGACTACCAAGTCATCTGTGTAAAGAAAGAACTATAAGGTAACATTAAT
GATAATAACTTTATTGCAAGTTCATGCCCGAAGGCTAATTGCAGACAAAC
AAGTATATAAATATACATGGGAATCGACATAGTTATCTAGTCTACTGTGA
AAGTTCTATGTTAACTAAGGTTGACTTTGGTTGGGTTTGACTTCTTTTTT
GAAGGCAGTGGAAAATGAAGAGACCCACGTTTTGTATCGTATTAAAGTGG
GTTGGTTGATTTTGGTAGTAAGATTGATTTTGGTAAGTTAGTCAAATGGT
GAAAGCTAGGGATTAATGGACGTGTGCGTGTGTTTCAGGTGGTCTCATCT
GCATCGCAATGAGGGAGGAGTTTCTGTACACCGTGGAGGCGTACAAGGAT
AAACTAGAGCCCGCCATGATAGCCTTGGAGGACAAAGGATCCTGGGAACA
AGTGGCACGTGACATCGTTCCCGAGTACTACCGCCAGCTGGACGGAATCA
TATTCATCTATAGGGTACTTGCCTAAACACTAAGGATATGGCCGATTGAA
TGTGCATTCCGAGTATTACGAAACTGGGTGATATTAAGGGGGACGGAATC
CTGTTAAGAATNGGGTGATATTCAGGGGGAGGGAATCCTGTTAAGAACAG
AAATAAAAACGATGTGACCCTTTCACCAGATCGGCATATAGTCATTAAAG
GCATCCAGGGCATTTTATGAGGCTTGAAACTTCAATAAAAAGGTCTAATT
TCTAGTCATTCCTACACAAAGTAAGGTTT Coding sequence (CDS) from alignment at Sc0000051:922972..929250+ >Blg01352.1 ID=Blg01352.1|Name=Blg01352.1|organism=Branchiostoma lanceolatum|type=CDS|length=669bp|location=Sequence derived from alignment at Sc0000051:922972..929250+ (Branchiostoma lanceolatum)
ATGGCGGACACTACCGTAGTAGACGTCAAACTGAGTGATACCCTTTGCCA
CGGTGCACAGAAACATGGCATGACCAGGGAAGAAGTCTTCAGGTATTATG
ACAACTGGGCCGACAGGTATGACAAGGACCTATTTGATCTGAACTACGGC
GGTCCCCGCCAGTGTGCCGAGGCTCTAGCGGAGGTCCTGTCAGGGAACAA
GACTGCAAGGATCCTGGACGTAGCCGCCGGAACGGGCCTGTGTGCAATGG
AGCTGATCAAGTTGGGCTACACCAACCTGGATGCGATCGACGGCAGCCAG
GGCATGTTAGACATCGCCAAGTCCAGGAACCTGTACCACAGGTACATCTG
TGACTTCCTGGGACCACGGCGCCTCGACATAGAGGACGACCACTATGACG
CCATCGCTTGCTGCGGTTCGTTCAGCCAAGGTCACTTGAAGGACGACTGT
CTTCCGGAGCTCATCCGTATCGTTAAGCCAGGTGGTCTCATCTGCATCGC
AATGAGGGAGGAGTTTCTGTACACCGTGGAGGCGTACAAGGATAAACTAG
AGCCCGCCATGATAGCCTTGGAGGACAAAGGATCCTGGGAACAAGTGGCA
CGTGACATCGTTCCCGAGTACTACCGCCAGCTGGACGGAATCATATTCAT
CTATAGGGTACTTGCCTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg01352.1-exon-Sc0000051-1570713199:922972..923113 | Blg01352.1-exon-Sc0000051-1570713199:922972..923113 | Branchiostoma lanceolatum | exon |
| Blg01352.1-exon-Sc0000051-1570713199:923415..923553 | Blg01352.1-exon-Sc0000051-1570713199:923415..923553 | Branchiostoma lanceolatum | exon |
| Blg01352.1-exon-Sc0000051-1570713199:924821..924946 | Blg01352.1-exon-Sc0000051-1570713199:924821..924946 | Branchiostoma lanceolatum | exon |
| Blg01352.1-exon-Sc0000051-1570713199:925927..926062 | Blg01352.1-exon-Sc0000051-1570713199:925927..926062 | Branchiostoma lanceolatum | exon |
| Blg01352.1-exon-Sc0000051-1570713199:928045..928137 | Blg01352.1-exon-Sc0000051-1570713199:928045..928137 | Branchiostoma lanceolatum | exon |
| Blg01352.1-exon-Sc0000051-1570713199:928810..929048 | Blg01352.1-exon-Sc0000051-1570713199:928810..929048 | Branchiostoma lanceolatum | exon |
| Blg01352.1-exon-Sc0000051-1570713199:929080..929250 | Blg01352.1-exon-Sc0000051-1570713199:929080..929250 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000051 | genome | Sc0000051:922972..929250 + |
Properties
| Property Name | Value |
|---|
| GeneID | Blg01352 |
|
