|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000625:74908..80984- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >Blg01256.0 ID=Blg01256.0|Name=Blg01256.0|organism=Branchiostoma lanceolatum|type=mRNA|length=6077bp|location=Sequence derived from alignment at Sc0000625:74908..80984- (Branchiostoma lanceolatum)
ATGTACCAGCAAGCAGAGCCGGTCCGGTCCCCTTTCTCCGGCCCCGGCAG
CGGCCAAACCAGCGCCCCGCCGGCCCAACCCCCTCCTGTCCACAAGAGTG
GCCCACGCGGGCGTGTCCGCGATGACACCGGCGCTTTTGGCAAGATGCAA
GAAGAGAAAGAATCCTCTTCACACACGTACGAAGAAGCCGAGGCGGTGAA
ACGTTACGCAACTGCAGGTCGCCGACGCTTTTGATACTGGTTTTTCGTTG
TATAATAGATTCTAATGTGCGGTATAATTAGTAAATTTTGTATATGAATA
ACTTACTTTGCAGCTTCGGTGATTTGATAACAATAAATTTGGAACTGCAA
TATTTATATGCAATATAAATGAAGTAAATGTAAATTTGCTATTGCCACAA
TCCAATGGACATTACATTACCACTCTAAACTTGAGAAAAATGTATCTTTA
ACAGACGGCAGTTATCCGGCAGGAGCAAGCGGTCGTGCTCTCTGTACCTT
CATCCGCTTCCACCGCAGCTGTATTGCCGCCGGCATTGCGGTGTTCCTCG
CTGTGGGACTCGCCCCTCTGACGTTCATCAATAAAGAGGTAAACACGTTT
GTACTACAAAGCCTGTCGTCAAGCTATTTCTCTAACAGTGATTCTGTTGT
GGATTTTTGAGACAAATTTTCCCCATGTTGTTTCTTATGTATTCTTATGC
CCAGTCACCAGACTTCAGGAATTGGCTGCCACGGACGCGAGGGGATGTAA
CTGCTCGAACTACGCGCTCTAGCAAACAACTCGACCGAATAAATCCCAGA
ACTGAACGCTACAAAAAAAGCAGCATACCATATATGACAACCCTAGTTAA
CAGTAGAAAGAAAAATGGCGACCACAAAAAGTTAGATGTATTGATAATGT
TGTTGATGATAGATTGCATGATAATGTTGAATATTTTAAAATTGTATATC
CGTACGTGGAAGTACGTGACTAAGAACGTTTCCTATTGTTTTAACTTATC
GAATGTTTGGGACCTGGACATGTTTTAATTTGTGGTGGTGTATTTGTGAA
ACAAACTACAATTCAGCCTTTGGCTGCCAGAGCTTTGTTTGTCAATAAAA
ACCATGTGATTGATTGATTGATGTGTGATATTATGGCATCCGTATATACT
TTTATAGGATTTATCTCAACTGTCCACCACTGCCTTGAAGCGTGACCAAG
ACCGTATGTCCGCCACTGTTGACGCCTTGAAGCGCAACCAAGACGACATG
TCCACCACTGTTGATGCCTTAAAGCGCAACCAAAACGACATGTCCACCAC
TATTGACAGCTTGAAACGCGACCTGGACAAGGAGCGAAGTCGAACCGCCA
GTTTGGAGCGACGTCCTTGCCGAATTAGTAAGACGTCACGTAAGTTGTTT
TGTTGTTGTTTTATGTACTATTGGTGATGGTCCTTTGGGAAGCACCATAA
GTATTAAAAAAGACAATTTGTGGCGCTGACTGTTGTTATTTCATGAGTTA
TAATGAATCATATATGTTATAATAAGACATATCAATCAATCAAACAATCA
ATCAATCAATCAAACCAATTAAAATGGCTGAATTGTGCTCTCTGTATAGC
CTCTTTCGCAGACTTACGAGGGAGTTATTTGACAGGCACACATGGATATG
AATATTTACCCAGGGCTTAGACCATCTTTCTAAGATGAACTAGAGTTCCG
CGACCTCATACCTTCGCCAAATGATTTTAACCTTTATGACTGACGTATTT
AGGACTGTTTCTCATCAATCATAAATCATACCAATTGATCGTATTCGCCC
AACTAGCATTTATCATCAATCACGATGGTCAAATATGGGCGCAAAATTTC
CAGACTTTTTTTTAGAATTCGAACAACATTCTTTTACGTTCGAAGTGACG
TTTTCGAATAGAACGTGCGTTCTATTCGGGGTCACTCGCGGTCATTTGCA
GGTTTTACTGTAAATCCGCGCCAAAACGTCTTTTCTGTCCTAGGTCCCTT
GCACAAGAAGAAAAAAACACTTTATAAAAAATACAAACCATTTTCTGGAC
AGTATATCTTTGCTGACATTTTTTGTGGGCATGGAACATGTAGCCAAGCT
ACTGGCGCCATTGTTGATGACTTTGAATGTTGCAGGACTTGTTTACGCCG
GCATCAAGTACCCCCTCCCCCTATCCGTGAGGCATGACATTGTTCCAAAG
TGGTATGAAAAACTTGAGCAATGTGCGTTCAAACTCACTCATCGAGGTCT
TAAATTTTCGAGAACTAATATACCGAGGCTTTTGTCTTAGGGATTTTTTT
GATACGGTGGGAATTTTTAATTAGGGGTGTTTTAGTGTAAAAAAAAATGT
ATTTTCGACCTATTTTCGGTCGTAGAAATAATTTGAATGAGAAATAAAAA
AAATCCTAAGATAAAAAGTTTATTATCATTTTTATTGTTCAAAATATAGA
GGATTGGGATTTTCAGTCACGTTTAGAACCAACTTATTTACACCATTTTG
TTATTTTGTCCACCGAACATCCTTTCTAAAACAGTCAACTTGGCCTATAT
CAGAAAATAGTCAGACAAAATTATGCAACATGAGTAAAACAGCAGGATCT
GAGGTACACACATTGGCTAATTTCATTTCCAATTGGCGAGACACGTGCGA
GAGATCGTTTGTCTAACTATTACAATCTTTTAGAAGATGTTACAGCTCCC
CCGGGGACCGCACGGGAGTCCCGGTAACCTGATACGCTCCCTTACAGTGG
AAATTTTCCCCTAGTAACGAACCATCGTGAATTATGCCGATGAGGTCCTT
ATTAGCATAATTTGCTTCAACAATGTTCACATTCACATAACTTTCAAATG
CCACAAGTATGAAATTTCCATCCATTACCTGTATTTAATTATAGTAGTTT
CTCATCAATTATGCAAATAACAGTTGCATATTTTCTATCTCTATTAACAT
TCCTCTCTTCCTCAGTTACAAATGTCACATATTTGAATAGTCATATCATG
GAACACAGCGGGGTTTTAAAATTTTCTCATTAGTTATGCAAATTAGAATG
TTATTTGCATAATTATATCCAATCATACAAAGCATCACGTAAGCTATATA
CATACCAAATATCATGACCATCCATCAAACCCATCTGGAGTTATAATATT
TTCTCATTAATTATGCGAATGAGGTCCCATTTGCATAGTTGATATCTATT
GATACCCCCCCCCCCCTCAGTTACATATGTCACATGTTTGAGAGTCCTAT
CATGGAATTTGGCAGATGTACAAACTTTCCTCATTAATAATGCAAATTAG
ATACTAATCTGTATCTAATCATGTACATCATCACTCAAGCTATCTACTTA
CCAAAAATCATGACCATCCGTCAGGCCCTTCTTGAGTTATTCCCTTTCAA
AGTCTGAAGCAAAACCTGCTCCAGCAGTTTCTAGAAAAGCCGCTAGGGGG
CCAAAACCTATACAACTTGCTCTCTGTCCAAAGAGCTATTTTCCACTGAA
AATTCAGGACCATAGCATGTCCAGAACACGAGATATCAAAACAGGAAGTT
CCGCTGCAGTACCGTAACAAGTTGCTAGGGGACCCAAAATCTAGTCATTT
TCATGTCTTATCAAGACCTACCCACCTACCATTTATCAAGACAATCCATT
CAAGCCTTCTCGTGTTATGCTGTTTGTTACAAACACACAAACACACACAC
AAACGCTACCCTCTGCATAACCATCTCGGCGAAGGTAACAAATGACAAGA
TAACCTTCTATATGTCTGCAGCAAAAATCGACATACCTACAACGGACACA
ACCGTTTCTCCTGTTACCACTGAAAGCTTAAGCATCAGTTCTGTTCCTAC
GCCACCGACAGACTCCACCAGCTCAAAAAATGAAGGTCAGTCTAACACGG
AATTTTGCCTGATTGTCTTTGTACAGTACAGTACAAACAGTACAGTCTTC
TATCTGAAAATGTCCATACCTTGGAAATTGAAAACTGTTATGTCTTGAAA
GGAGAGAAAGAAACATCATGCATCAGGACCCATAACTAGGACGGTGGCCG
GTACCGACTTCCAGCCGCCTTTAACCCGTTGCTCATGTCAACAATTCTAG
GTCATATTGTTTTCGCTGGATTCCTGTTGATACTTAAACTCTGAAAAATA
TTTCACAATAAGGAAAGACATAGCATGGAGTGCATGTAATAAACTGAATA
AAATCTAGTATAAGCAACAATCTTAAGATACAAATTTTCCGTACTATGGT
CGAGCCAATTTTGCTATATCTTGCTAAAACCTGGACTTTGACTACTCGCT
TGGAGAAGAAACTAGATGGAACTTATATATACTTCACTTCTACGCAAAGT
ACAGAACATGGGTTGGAAACAGCATTCAACTATCCAAACCATTTACGGTT
CCCTCCCACGGGTGTCACACGGACTTTGATAGAGAAGGGTCCAGTTCAGT
GCTGGTCACTACCTTCGGGCGAGTTATCTCCTTACTCAATCTGCGGGGGC
CTCGGTGTAAAACACACTGAAGGAAGTTGACTTTTCTTTGTGTTGTATTT
TAGATTTATGTCATGCCTGGGCCTGATACGGGTGTTCAGTATCACATGAT
GTTCTAGAGTTGTATCACACGGGCTTACCAAGAATAAGAATGCATTTCGA
GCGCGCCGGTTGCGCCACCGTAAAAATTCGAATGCCGGATTCGGAGGTTA
GAAGCAATGTTGTTACAGTTTTGTGTTCGAGGACACAAAACTCCCTCAGC
TTTTGGCACTTTCCGCATTGAAATGTGTGTTTTTTCGGATGGGCATGACA
TAAATAAAATACAACACGTTGTATATTGTATAACCCTTGGTCCGAGCCCT
CCCGTGGATCGGATCGCCCGACGGCCTACACGATCCGTCGGGTGATCCTA
CCTGCGATCTTGCTGCTACCTCGGGTGATACGGAACACTCTGTGTTGTAT
TTTATATGCACCAGGGGTTTTGTGTAAAACAGGTCACTGTTCAAATTTCT
GGAAAATGAAAACACTGAAACTTCATGGCACTTCCTACGTTTCCTCGATG
CAAAGTGTCCGGAGCACCGCCATAGAGAGTTCCTCGTGATAACCATACAA
AATGGACAGCATTTTCAGTAACCAAACTCCCAACCTCATGAGTGCAAGCT
AGATAGGGTATGATATTAACAGTTTGTGTTCCAACATGTGAATAATCCTC
GTATGTTTTTTTTTTCATACTTCTTGCAGAAAAGAATCGGAACAAGTTGG
ACAAAATCACCTTCGGTGGGAGGGGGGAAGAACTGGGAAAATTCAAGAAT
AACTACGGAGTGGCCGTGTCTGCTATCAATGAGATATTTATAACTGATGC
GGACGGACGGGTCCAAGTGTTCAGCATAAACGGGACCTATCTCCGCTTCT
TCCCAACGCTAGTGCCGGGTGAAGATAAAATGTACCCTTACAGTGTTGTC
ATTGACGTGGAGCCTTGCTACCTGTGGGTAGTTGGGACTCCTGCGATCAC
TCGTGCTGATGCAAATGTCGTACAGTATAGCATAGATGGTCTGCCCATTA
AGAAGTTCGAGTTACGCTTCAGGAGTAGGTTTACCCATCCTGACATTGCG
ATAGATGTGCACAACAACAAAGTTATCGTGGAAGTGGGAGGCACAATAAT
GATGTTTCAACCAAACGGCTCTCTCTATCGGAGTTTTGAAGTATTAAACA
AGAAGAATGCTCTAATTGGTGCCGGTGGGGTCGTATCGGACAGCGAGGGG
AATATCCTGCTTTCAGACAGGTTAAAAAGCATTAAGTTGTACAGTCACTT
AGGAAAAATGTTACTTGAATTTGGAACCTTTGGGAGCAGAAAGGGTGAAT
TGAACAGGCCGCGAGGCATTTGTGTGGACACCGTGGGCCGTATTATCGTG
GTGAACCGTGGCAACAACCGGGTAGACATGTTCACAGGCCGCGGGGAGTT
TATCCGTACTGTCGCAAAGATTACTAACCCGTGGGGTATCGCTATAGGAC
CGGACGGGCAGTTGGTGGTGACTAGCGGTTATGATTCCACCGTTACTATC
GTTCCACGCCACATGGTGTTTCCTTAA Coding sequence (CDS) from alignment at Sc0000625:74908..80984- >Blg01256.0 ID=Blg01256.0|Name=Blg01256.0|organism=Branchiostoma lanceolatum|type=CDS|length=1431bp|location=Sequence derived from alignment at Sc0000625:74908..80984- (Branchiostoma lanceolatum)
ATGTACCAGCAAGCAGAGCCGGTCCGGTCCCCTTTCTCCGGCCCCGGCAG
CGGCCAAACCAGCGCCCCGCCGGCCCAACCCCCTCCTGTCCACAAGAGTG
GCCCACGCGGGCGTGTCCGCGATGACACCGGCGCTTTTGGCAAGATGCAA
GAAGAGAAAGAATCCTCTTCACACACGTACGAAGAAGCCGAGGCGGTGAA
ACGTTACGCAACTGCAGACGGCAGTTATCCGGCAGGAGCAAGCGGTCGTG
CTCTCTGTACCTTCATCCGCTTCCACCGCAGCTGTATTGCCGCCGGCATT
GCGGTGTTCCTCGCTGTGGGACTCGCCCCTCTGACGTTCATCAATAAAGA
GGATTTATCTCAACTGTCCACCACTGCCTTGAAGCGTGACCAAGACCGTA
TGTCCGCCACTGTTGACGCCTTGAAGCGCAACCAAGACGACATGTCCACC
ACTGTTGATGCCTTAAAGCGCAACCAAAACGACATGTCCACCACTATTGA
CAGCTTGAAACGCGACCTGGACAAGGAGCGAAGTCGAACCGCCAGTTTGG
AGCGACGTCCTTGCCGAATTAGTAAGACGTCACAAAAGAATCGGAACAAG
TTGGACAAAATCACCTTCGGTGGGAGGGGGGAAGAACTGGGAAAATTCAA
GAATAACTACGGAGTGGCCGTGTCTGCTATCAATGAGATATTTATAACTG
ATGCGGACGGACGGGTCCAAGTGTTCAGCATAAACGGGACCTATCTCCGC
TTCTTCCCAACGCTAGTGCCGGGTGAAGATAAAATGTACCCTTACAGTGT
TGTCATTGACGTGGAGCCTTGCTACCTGTGGGTAGTTGGGACTCCTGCGA
TCACTCGTGCTGATGCAAATGTCGTACAGTATAGCATAGATGGTCTGCCC
ATTAAGAAGTTCGAGTTACGCTTCAGGAGTAGGTTTACCCATCCTGACAT
TGCGATAGATGTGCACAACAACAAAGTTATCGTGGAAGTGGGAGGCACAA
TAATGATGTTTCAACCAAACGGCTCTCTCTATCGGAGTTTTGAAGTATTA
AACAAGAAGAATGCTCTAATTGGTGCCGGTGGGGTCGTATCGGACAGCGA
GGGGAATATCCTGCTTTCAGACAGGTTAAAAAGCATTAAGTTGTACAGTC
ACTTAGGAAAAATGTTACTTGAATTTGGAACCTTTGGGAGCAGAAAGGGT
GAATTGAACAGGCCGCGAGGCATTTGTGTGGACACCGTGGGCCGTATTAT
CGTGGTGAACCGTGGCAACAACCGGGTAGACATGTTCACAGGCCGCGGGG
AGTTTATCCGTACTGTCGCAAAGATTACTAACCCGTGGGGTATCGCTATA
GGACCGGACGGGCAGTTGGTGGTGACTAGCGGTTATGATTCCACCGTTAC
TATCGTTCCACGCCACATGGTGTTTCCTTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg01256.0-exon-Sc0000625-1570713199:80768..80984 | Blg01256.0-exon-Sc0000625-1570713199:80768..80984 | Branchiostoma lanceolatum | exon |
| Blg01256.0-exon-Sc0000625-1570713199:80397..80530 | Blg01256.0-exon-Sc0000625-1570713199:80397..80530 | Branchiostoma lanceolatum | exon |
| Blg01256.0-exon-Sc0000625-1570713199:79596..79827 | Blg01256.0-exon-Sc0000625-1570713199:79596..79827 | Branchiostoma lanceolatum | exon |
| Blg01256.0-exon-Sc0000625-1570713199:74908..75755 | Blg01256.0-exon-Sc0000625-1570713199:74908..75755 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000625 | genome | Sc0000625:74908..80984 - |
Properties
| Property Name | Value |
|---|
| GeneID | Blg01256 |
|
