|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0001019:7087..13428+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg01255.3 ID=Blg01255.3|Name=Blg01255.3|organism=Branchiostoma lanceolatum|type=mRNA|length=6342bp|location=Sequence derived from alignment at Sc0001019:7087..13428+ (Branchiostoma lanceolatum)
GTTGTATCTTGCCAGAAAATGGAGGTGTGTTTATGCGTTCTTGGCGATCA
GGATTGTCACGGAATTTTGTTGATATAAATTCCACTTGGAAAGCTCGATA
CTAAAACGCAGGGAGCTAACAAACTGTTGGTTACGAATGATTTAAACTCC
TTCAAATACGGTACTTGACAATCGGTCAAGGGGAATTTGATATAATTTGT
TCCACCCTCCCCAGTCGGACACCCAAAACTTCGGCACGCCTCCCGAGCTA
ACGATCCTGTACAGCTGATCTCCCGCGTTATATCACGACACGGGATTTCT
GTAGTCATTCGGTGACAAACTGCCGACACTTCTTATGGCAATGGCGCGCC
AAGTCCGCGCTAGAAACATATCTGGGGTGATAAGGACCGGATTTTTACGT
GGAGACATTTTTGCGGCAGGGGAATTGAAAGTAGACCGCCCTCGTCCCCT
CATGACAGGAAGCAAAGTTTCCGAAGTCCTGTCACAAGATCGGTGAAGTC
CTTGGTCTGGTACGGGAGGAAAACAAGGAGACAGTGTCTAGAGACACTTA
ACTTGGCATTCATGAATGAGGGATGTTGTAAAAGTACTTACTTCTGGCTG
CTTGAAGAAGGGTCTTGGACTCCTTGATAAGCTGCTTGATGGCTTGAGAG
GTCCGCTCCAGTTCGGCCTCGTGTGTGTGGATGTTGTCCCGAAAGTACGG
GCTGTCTGTGTAACACTCGCTAAATTCCAACGGAAGGAGCCCCATCTTGG
GCTAAGTCCTGGATTTGGGCTGTATCAGCGTGAAAACTCCGTGAAAAACG
AGGTTTTTGGCAGGACAAACTTGGGGAACTCGGAAGACACCTCCAAGTTT
CACGGCTCGTCACTGACTAACGGTGCGCATGCGCCCATCCCAGCAGCCAC
TGCGATCCATCATGGCCGTCCGAGTCTGATCCGGAACCCGCGAGTCGCCG
GGCTGTCAGTTTATCAGGTATTTCTCGTTATTTATGGCGCTGTGTCAAGA
TCTAACTATGCAGCGTTGCAAACAGGTCATGTATAGCGCGTCTCTGACCG
TCAAACGAAGTATCCGCNCCGAAAGTACGGGCTGTCTGTGTAACACTCGC
TAAATTCCAACGGAAGGAGCCCCATCTTGGGCTATGTCCTAGATTTGGGC
TGTATCAGCGTGAAAACTCCGTGAAAAACGAGGTTTTTGGCAGGACAAAC
TTGGGGAACTCGGAAGACACCTCCAAGTTTCACGGCTCGTCACTGACTAA
GGGTGCGCATGCGCCCATCCCAGCAGCCACTGCGATCCATCATGGCCGTC
CGAGTCTGATCCGGAACCCGCGAGTCGCCGGGCTGTCAGTTTATCAGGTA
TTTCTCGTTATTTACGGCGCTGTGTCAAGATCTAACTATGCAGCGTTGCA
AACAGGTCATGTATAGCGCGTCTCTGACCGTCAAACGAAGTATCCGCACC
GCTGTGGCCGCGGCACACGGCGAGTCATTTTCATCCATTTCCCATCATGA
TATCCCACATGTCCCCCCCCCCACATACTTTGATTGTGACGTGGTGTGAC
CAGCTGTTTCAAATAAAGTGTATTTGAAGATGTCACAATTACGACAGAAA
TAAACTTGTATCTATATATTATCTTTTATTCTTTTAAAACATTCACCCTC
CCTACACTGTTTACTATTTGCTGCTCACATTCCAGTGTTATAAGAAGTTA
ACAAAGAAAAAGTTCAAAGATGCCAAAGAAGAAGACAGGAGCCCGGAAGA
AGGCGGAGAAGCAGAAGATGAGACAGAAGGAGATCAGACAGGCCAAGGAC
AATGTCAGCATCGTGGATCATCCCTGTAATTTTGTTATGGTAAGTTCTGT
TCTTAGCCATGCTTTTTAGACACTGCGCTTATTTGTTTAACAGTTATTAA
ATGAATCATTTAATGAACAACAAAGTTCTTTATTTACAACCAAGGAAATG
GTAATAGCCGAGTTTCGATGACCATCTATCATCTTCTTCAGGTAAATGAT
GACAGGCTCACTTTGCACTGCAGTTAGGTGTCACTGCTAACAATGTGGTC
CAAAAAAAGTATATAAAGTATCCAAACGTTATTGAATTAAATTCTTGAAA
TAGACTCACTAGAGGATACAGGTTATAACTTATATATCAGGGAGAAACTT
ATCATATTTCCTTTTCATTTCAGGAATGTGACAAATGTAGAAGGTGAGCC
ATTTACATATTCACAGTAGCATTCTACATATTATCTAACCAAATACAATG
TATGACATTTTTGTTTGTTGATTAAGTCTGGTACTGTGTGATATTTATGG
TGGTTTTTCTCTTGTTCATCAGGAGACAGAAAACAAGAGCATTCTGTTAT
TTCTGCTCACATGTCCAGAAACTGCCTGTTTGTGCAAGCTGTGGTAAGTC
AGACACTTTCTGTTTGGAATTCTTACCATACAGGCAGGATTGGAAAAAAA
TTCAATGTATATTTACAACCTGACATTTATCGAAGCCCTTTTTGTGTAAC
ATCCTTTTATCAGATGCCCAGGATGTTGGGGTTTAATAGTTTGTTTTTTT
TAATTTTTCCAGCAAAAACCAAATGTATGATGAAGTCTGGGGACTGTGTA
ATCAAACATCCTGGCCAGTACACCACAGGGATGGGGATGGTGGTGAGTAC
AAACTACAGCTAGGACCAGGAATGTCTTTCTCCTTACAAGTGCATGTACA
AAATTAGTGTGAAATTCTTGAAATTTCTTGATAGGGAAATGGGTTTCATG
CATGAGTAGCTGAATTTGTTAAAGGCCATCACATGACATGTTCTGTTTTA
CGCCAGGGTGCAATCTGTGATTACTGTGAGGCCTGGGTGTGCCATGGTAG
GAAGTGCCTGTCCACACATGCCTGCGAGTGTCCACTACAGGATGCCTTAT
GCCTGGAGTGTGATAGAGGTATCTGGGATTCAGGTAGGAGTTGAACCATC
AGAAATATAGGAACTGGTCATACAAAATGATGCCTTATTTTTACAATACC
CTACGTGTGTTCATATTGTTATCACTTATCAGCAATCTCTGCAACCTATG
TCCTGCCAAATGCTGCCATGTTGACTTTTATTAGTTGGAAAGAATGTAAT
GTGTTTTGTGTAATGTGTAATGTCTAAGGCAAACTACAGCCATTGAAAGG
CCTTATTATGTTATGTATCTTTGTATGTCTGCTTACAGGTGGCAGGTTTT
TCAAGTGTGCCTATTGTGACAACTTCCTGTGTGAGGATGACCAGTTTGAA
CACCAGGCTAGCTGTCAAATCCTGGAGGCAGAGAACTTCAAATGTATGTC
AAAATTTTAACTCTAACATCTATAATAGGCCAAAACTCAAAACAGATCAA
GTGTGTCCAAGTTGTATACGTGGCAGAGAGATGGCAAGAGAAAAACAAAT
CGCTACGTACTTCATCATGTCCATGCAGGTTTGTCAGGCATAGTCACATT
CGTTGTTGGCTGTCATACGATTTTGATGACTGACATGTCATAGAATTTTC
ATGCAGGCTGACAGAACCAACTGCAGACAAGGATCTTAGGCAACTTTTTC
TGTAACAAGCAGGGCTGTCTCCAGCTTTAAATTTTTTTCCGTCCCTCTCA
ATATATGAGAGCCAATGTTTTAGTTTTCGTTGTTAAAATAAAATCCGTCA
TTCTAAGCCTATGAAATGCATTTTTATCAATATCATGTCAAGAAGTTCCC
ATTTTTGGAACGGACAGTGTGAAATTTTTTCCCATCCCAACAAGCAAATT
TCCGCCCCGGGACGGAGGGACGGGTCCTGGAGACAGCCCTGGTAATAAGA
CAGCTGAATTTTGTATGACACATGCACAACTATCCCAAGAATGCCCTTAG
TTTGTGGTCATATGATGAGCCCTATGTTTACTACCACAGAAAACAATGAA
GATTGGTAACCAAAGAGTTAAAATGATGATTTGATGATGATACAGTCTAT
TTCCCTTATGCTGGATATTCATTCCTAAGATTGTTTGGTATATTGAATGG
AACAGAATGTTTTTGTACAGTACAGTTGAAATGTACATCAACCTTGATTC
CAATTCTACACATCTACCATACAGGTATGTCCTGTAACAGACATGGCCAG
TACTCCTGTATGAGATGTAAGGTAGGTGAATCAGTCCTTCATCCCCTTAA
CATTACCTTGTCTTTCTGACCTTTCCTCCATCATACTCAATGTTTTATGG
AGATAAATCTCCAAACAAAATACATGTATTAATAGCCCATCAAAGGTTAT
CAGCCAAGGAGTGTTCATTTTGCAGGAAATGATTTGTTTGGAGGCCAGGC
TAGGAGACCTCTCTTTCCAATCTTGTATACACAAATCTGTCTATACCATC
CTTTCAGTACAGCATGAAGCAGCAAGTTCCCTTTTTTTAGTTTTCACCGC
TTGTAACTAATGAATCTCTTGGTCCCTTTAGACTGCGTACTGTGATGACC
ATGTGAAGAGGAAGGGGGCTAAGATCAGTAAAGGCCAGCCTGTCACATGT
CCGAAGTGTGGGCACAACACCAGAGAAACCAAGGATCTCAGTGTGTCAAG
TAAGTGGTTTAACCCTTAAACAGTACTGATGAAGCTTTTGGGTATATTGC
TATCTTATCAAACTATTCCATTTTGTAAGAGTAAATTGACTTAGAAAGAT
GTGTCTTTGTTCTGTTCTACAGCGAGGAATTATGACTATGGGAGGCAGAC
AGAAGATGAAGAGGCTTCAGGAGGCTGGGGCTATGCCTCCTATGGGGGGT
ACGGTGGATACAGCTATGGCACTGCTGATGGGGAAGATGTCGATGGTAAG
GATCACTTTTGCATCTCATTCTTGCTCATACTATTGGAATCTAGTATTCA
GTGTTGAATTTCAAAAGACTCTGTAAAGTATGCAACTGTCGTCATGGCTT
TCTATAATAGACCTCATTCCAGATACTGAATCGTATTCTCGCGAGAGCAC
ATTCTTGGCGTGAACGTGCTCTCGGGAGAAGCAGTATCTGGAATCTGTAT
CTGGAATAAGGTCTATTCAAGGAATGTGAGCATTTTGATGATAATGTTTC
TTTTCACAGATGATGATGATGATGAGTCGGAAGAAGAGGATGAGGAGGAA
GATGTGTCCAACCCTTTGTCTGACCTCAACCTGGGTGCCACCTACGCTAG
CGGTTATCAAGAAGAATATAACAAATACGAGGACTGAGAGCAAAGCATTT
TGTTTTACTCCTAGTCCTTGGCAACTACTTGTTTGAAGGGCAGATTGCAA
CTGTTTGTGTAGATTGATAGAAATTTGCTAATCTGGTTTTGACAGGCAAT
GACAAGGCTATTTCTGCCTTTTGGCAAGTCAAGACATGACATGATTCTTA
CAGAAGGACCCTCCTAAGCTGCTACAAGTGCCAACTAATGGATGTTTGTC
CGACAGGATGCATGCGTCTTATTGAAATTATAGCAAATCCCAAAAAAAAA
ATTATTTGGATACCATGATCAAGATATATGCAGAAGCATCAACCTCTGTT
TCAAGTTGAACTTAAATGTTTTAAACTTGCAAAGTAGTGCTATATGTAAT
TCTAACTTTGAGAATAAAAGTATGAATGGAAAGTAAGGATGTTTCCTTTT
CATTTATGATGCAACTGACAACAAAAGATGGTCTCAGACATTTTATTGTT
CTGCAAGTGTTCCACCGGTGTGGCAGGGTTTTGATGGAGCTTCACATGTG
CTTTTTCAATGTTAAAATTCTACAATGGTTACTAAGAATATATATTACAG
GTTTTTTTCTGTAGCAAGTGACTAGATGCAATAGCATTATGTATTATATT
CGACAATATCATGACATTACCTACAAAAATAAATGCACTCTATAATTTTC
CCCTGGCAGACTTATAATTGAAATATAATATTCCATTACACTGATTGCAC
CAAAAGTACACCATATTCACATTATACCAATATAAGATCTGGCATCCCAT
TCTGTACTCATCAAAATACATATATTTCCTGAGAACAGGTATGATTTTAG
TCAGTTATAAGTTAGTCTTATGCCCACATAGATGCAAGTGACAAGGCACA
CTTTGGTTAAGTCACAAAATGTTGGTTTCAGCAAAGCTGGTGTTTTACAC
CAAAGGGCAGTTCTATAGTACTGGCTATACAGATACAGTCAGTGATAGTC
TATCTTTGTAGCATAGGATAAATGTTTTCATAGAAAACAGCCATGTCAGG
TTTCTGACAATTCTGTCCAGTCTAGCCAGACATGTAGATATGTTCCGCCT
GAGGTCTACATTTGCTGGTCCAGTTAAACTTACTTAACTAAGTACACATT
CTTCATTATTTCCTGACTAAGGCTACACAAAGTTAATTTCAT Coding sequence (CDS) from alignment at Sc0001019:7087..13428+ >Blg01255.3 ID=Blg01255.3|Name=Blg01255.3|organism=Branchiostoma lanceolatum|type=CDS|length=939bp|location=Sequence derived from alignment at Sc0001019:7087..13428+ (Branchiostoma lanceolatum)
ATGCCAAAGAAGAAGACAGGAGCCCGGAAGAAGGCGGAGAAGCAGAAGAT
GAGACAGAAGGAGATCAGACAGGCCAAGGACAATGTCAGCATCGTGGATC
ATCCCTGTAATTTTGTTATGGAATGTGACAAATGTAGAAGGAGACAGAAA
ACAAGAGCATTCTGTTATTTCTGCTCACATGTCCAGAAACTGCCTGTTTG
TGCAAGCTGTGCAAAAACCAAATGTATGATGAAGTCTGGGGACTGTGTAA
TCAAACATCCTGGCCAGTACACCACAGGGATGGGGATGGTGGGTGCAATC
TGTGATTACTGTGAGGCCTGGGTGTGCCATGGTAGGAAGTGCCTGTCCAC
ACATGCCTGCGAGTGTCCACTACAGGATGCCTTATGCCTGGAGTGTGATA
GAGGTATCTGGGATTCAGGTGGCAGGTTTTTCAAGTGTGCCTATTGTGAC
AACTTCCTGTGTGAGGATGACCAGTTTGAACACCAGGCTAGCTGTCAAAT
CCTGGAGGCAGAGAACTTCAAATGTATGTCCTGTAACAGACATGGCCAGT
ACTCCTGTATGAGATGTAAGACTGCGTACTGTGATGACCATGTGAAGAGG
AAGGGGGCTAAGATCAGTAAAGGCCAGCCTGTCACATGTCCGAAGTGTGG
GCACAACACCAGAGAAACCAAGGATCTCAGTGTGTCAACGAGGAATTATG
ACTATGGGAGGCAGACAGAAGATGAAGAGGCTTCAGGAGGCTGGGGCTAT
GCCTCCTATGGGGGGTACGGTGGATACAGCTATGGCACTGCTGATGGGGA
AGATGTCGATGATGATGATGATGATGAGTCGGAAGAAGAGGATGAGGAGG
AAGATGTGTCCAACCCTTTGTCTGACCTCAACCTGGGTGCCACCTACGCT
AGCGGTTATCAAGAAGAATATAACAAATACGAGGACTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg01255.3-exon-Sc0001019-1570713199:7087..8053 | Blg01255.3-exon-Sc0001019-1570713199:7087..8053 | Branchiostoma lanceolatum | exon |
| Blg01255.3-exon-Sc0001019-1570713199:8434..8925 | Blg01255.3-exon-Sc0001019-1570713199:8434..8925 | Branchiostoma lanceolatum | exon |
| Blg01255.3-exon-Sc0001019-1570713199:9260..9279 | Blg01255.3-exon-Sc0001019-1570713199:9260..9279 | Branchiostoma lanceolatum | exon |
| Blg01255.3-exon-Sc0001019-1570713199:9409..9479 | Blg01255.3-exon-Sc0001019-1570713199:9409..9479 | Branchiostoma lanceolatum | exon |
| Blg01255.3-exon-Sc0001019-1570713199:9649..9728 | Blg01255.3-exon-Sc0001019-1570713199:9649..9728 | Branchiostoma lanceolatum | exon |
| Blg01255.3-exon-Sc0001019-1570713199:9893..10019 | Blg01255.3-exon-Sc0001019-1570713199:9893..10019 | Branchiostoma lanceolatum | exon |
| Blg01255.3-exon-Sc0001019-1570713199:10275..10379 | Blg01255.3-exon-Sc0001019-1570713199:10275..10379 | Branchiostoma lanceolatum | exon |
| Blg01255.3-exon-Sc0001019-1570713199:11161..11207 | Blg01255.3-exon-Sc0001019-1570713199:11161..11207 | Branchiostoma lanceolatum | exon |
| Blg01255.3-exon-Sc0001019-1570713199:11518..11635 | Blg01255.3-exon-Sc0001019-1570713199:11518..11635 | Branchiostoma lanceolatum | exon |
| Blg01255.3-exon-Sc0001019-1570713199:11759..11881 | Blg01255.3-exon-Sc0001019-1570713199:11759..11881 | Branchiostoma lanceolatum | exon |
| Blg01255.3-exon-Sc0001019-1570713199:12146..13428 | Blg01255.3-exon-Sc0001019-1570713199:12146..13428 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0001019 | genome | Sc0001019:7087..13428 + |
Properties
| Property Name | Value |
|---|
| GeneID | Blg01255 |
|
