Blg01229.4 (mRNA) - B. lanceolatum

Overview
NameBlg01229.4
Unique NameBlg01229.4
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000158:104700..106368+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg01229.4 ID=Blg01229.4|Name=Blg01229.4|organism=Branchiostoma lanceolatum|type=mRNA|length=1669bp|location=Sequence derived from alignment at Sc0000158:104700..106368+ (Branchiostoma lanceolatum)
CCTCACAGCTGCGTCCGAACATAGCAGAAGAAGAAGAAGAAGTCATCTCC ATGTGGTCTTAATTCATTACTGGTAAGATTATATTTCTATTGTTTAGCTT TCATTCTCTTGGTTTTTATTTTATGGTCAACGACCCTTGTTTAGATTCGG CAATAGCTAACAATTTGTTAGTGTCTCTATAAGTAGACGTCATTGAGTTT TCACTTCAAGGTGTCATAATAAACACCTAATTTCCTTTTTTTCGAAATTC TGGTTGCTATACCTGATACAATTCCCGATATATTTTCAAGAAATCCATGC ATATTTTCAGACAAAACTAGCAAATTTAAAAAGACCTGGTGGCTACTGGT ATGAAATGGAGTCCACACTATGACCTACTTTTTAAAGACAAGACATTCAT AAACAACCTTTCTTGAGTAGGATTTCTGTCTAACCGATTTTCATTCTCAC ACACATACATTATGTCATGGCTACAGTGTCGTCTGATTGCAATTATATGT ATATCTTTTTAATCAGCTAAACATGCCCTCAATTAAAATCCGAAGTGAAT TTACCTTGTTTAAAAGAAGCAACCTCACTTTATTTGGTGCATAATCTATT ATGATAAGAAGAACGATTTGCATGCCTCTGTATTAGTTATTGCATATTTC GTTCGTACTCTTACAACGTGTCAGACACCGCGCCAATCAATATACTGCAT GTATATTGCATAATATGTACACATATCATGATATTGTGTACCTAGTAAAT TCGTCTGTTGACTTCGATGTTTCAGGATGACTCAACAATAAACACCAGCA AGATGACTTTATTTGCTCTGCTTCTAAGTATGGTCATCGCAGCATCTGCG GGTAAGATTATTTCAAATTTCAATATTTTGAGGTCTCAAGTTGCTCTTTT TTACTCTTTATCCTGATTCATCTAGATTTTTAGACTAAAGCCTATTTATA AAACAAAGAAAAATGGAAGAAAAATTGATAGAATGAATAGAAGAAAAAAT TAATTATAAAAGTTTGCTGACTTTGCAGGCTTCGTTGGATATTCTTGTTT AATAACTTTTTTTCGTCAAATGAATCTTCGAGGCGCGACGTCTATGTAAA AATTATATATTGACAGCTGTCATACATACGAGTGATTTGCTATTTGTCAT CGTTTTCTACATTGTATGCTTTTTAAGAAGTCCACTGATCTTTTCTTTCT CTTCAGGGCCTTGTGACGAGTACTCAGAGTTGAGCGACACCTGGCGAAGT GTTAACAACAAGCGGCCACCTTTATTTTGTGACCGAGGACTTACCGCAGG CTGGTACCGCTTCACCGGGCCTGCAGGTGATCGGCTACCGACGGTGAGCC CGGGATCTCTCCTCCGCTGCGGCACAACCGCACCAGTCTGGATGAACGGA GAACACCCAACTATCGCTGACGGGGTAGTGACGCGTCAGGCATGTGCCTT CTGGACCTTCTGGAACATAGTTGAGCCCTGTTACAACTCCTGGAACATCG AAGTCACGGCTTGTCCCGGTGGTTTCTACATTTACTTCCTGACACCCACC CCAGACTGTTCTCATGCCTACTGCGTTGGTATGAAACATTTCGTTCAGAG AAATATATCTAAACTGTTTGATTAAGGTAACAAGACTGGTTAACATGACT TACCCAAAATTATTAATCT

Coding sequence (CDS) from alignment at Sc0000158:104700..106368+

>Blg01229.4 ID=Blg01229.4|Name=Blg01229.4|organism=Branchiostoma lanceolatum|type=CDS|length=468bp|location=Sequence derived from alignment at Sc0000158:104700..106368+ (Branchiostoma lanceolatum)
ATGACTTTATTTGCTCTGCTTCTAAGTATGGTCATCGCAGCATCTGCGGG
GCCTTGTGACGAGTACTCAGAGTTGAGCGACACCTGGCGAAGTGTTAACA
ACAAGCGGCCACCTTTATTTTGTGACCGAGGACTTACCGCAGGCTGGTAC
CGCTTCACCGGGCCTGCAGGTGATCGGCTACCGACGGTGAGCCCGGGATC
TCTCCTCCGCTGCGGCACAACCGCACCAGTCTGGATGAACGGAGAACACC
CAACTATCGCTGACGGGGTAGTGACGCGTCAGGCATGTGCCTTCTGGACC
TTCTGGAACATAGTTGAGCCCTGTTACAACTCCTGGAACATCGAAGTCAC
GGCTTGTCCCGGTGGTTTCTACATTTACTTCCTGACACCCACCCCAGACT
GTTCTCATGCCTACTGCGTTGGTATGAAACATTTCGTTCAGAGAAATATA
TCTAAACTGTTTGATTAA
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg01229.4-exon-Sc0000158-1570713199:104700..104771Blg01229.4-exon-Sc0000158-1570713199:104700..104771Branchiostoma lanceolatumexon
Blg01229.4-exon-Sc0000158-1570713199:105475..105550Blg01229.4-exon-Sc0000158-1570713199:105475..105550Branchiostoma lanceolatumexon
Blg01229.4-exon-Sc0000158-1570713199:105906..106368Blg01229.4-exon-Sc0000158-1570713199:105906..106368Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg01229.4Blg01229.4-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000158genomeSc0000158:104700..106368 +
Properties
Property NameValue
GeneIDBlg01229