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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000158:104700..111154+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg01229.1 ID=Blg01229.1|Name=Blg01229.1|organism=Branchiostoma lanceolatum|type=mRNA|length=6455bp|location=Sequence derived from alignment at Sc0000158:104700..111154+ (Branchiostoma lanceolatum)
CCTCACAGCTGCGTCCGAACATAGCAGAAGAAGAAGAAGAAGTCATCTCC
ATGTGGTCTTAATTCATTACTGGTAAGATTATATTTCTATTGTTTAGCTT
TCATTCTCTTGGTTTTTATTTTATGGTCAACGACCCTTGTTTAGATTCGG
CAATAGCTAACAATTTGTTAGTGTCTCTATAAGTAGACGTCATTGAGTTT
TCACTTCAAGGTGTCATAATAAACACCTAATTTCCTTTTTTTCGAAATTC
TGGTTGCTATACCTGATACAATTCCCGATATATTTTCAAGAAATCCATGC
ATATTTTCAGACAAAACTAGCAAATTTAAAAAGACCTGGTGGCTACTGGT
ATGAAATGGAGTCCACACTATGACCTACTTTTTAAAGACAAGACATTCAT
AAACAACCTTTCTTGAGTAGGATTTCTGTCTAACCGATTTTCATTCTCAC
ACACATACATTATGTCATGGCTACAGTGTCGTCTGATTGCAATTATATGT
ATATCTTTTTAATCAGCTAAACATGCCCTCAATTAAAATCCGAAGTGAAT
TTACCTTGTTTAAAAGAAGCAACCTCACTTTATTTGGTGCATAATCTATT
ATGATAAGAAGAACGATTTGCATGCCTCTGTATTAGTTATTGCATATTTC
GTTCGTACTCTTACAACGTGTCAGACACCGCGCCAATCAATATACTGCAT
GTATATTGCATAATATGTACACATATCATGATATTGTGTACCTAGTAAAT
TCGTCTGTTGACTTCGATGTTTCAGGATGACTCAACAATAAACACCAGCA
AGATGACTTTATTTGCTCTGCTTCTAAGTATGGTCATCGCAGCATCTGCG
GGTAAGATTATTTCAAATTTCAATATTTTGAGGTCTCAAGTTGCTCTTTT
TTACTCTTTATCCTGATTCATCTAGATTTTTAGACTAAAGCCTATTTATA
AAACAAAGAAAAATGGAAGAAAAATTGATAGAATGAATAGAAGAAAAAAT
TAATTATAAAAGTTTGCTGACTTTGCAGGCTTCGTTGGATATTCTTGTTT
AATAACTTTTTTTCGTCAAATGAATCTTCGAGGCGCGACGTCTATGTAAA
AATTATATATTGACAGCTGTCATACATACGAGTGATTTGCTATTTGTCAT
CGTTTTCTACATTGTATGCTTTTTAAGAAGTCCACTGATCTTTTCTTTCT
CTTCAGGGCCTTGTGACGAGTACTCAGAGTTGAGCGACACCTGGCGAAGT
GTTAACAACAAGCGGCCACCTTTATTTTGTGACCGAGGACTTACCGCAGG
CTGGTACCGCTTCACCGGGCCTGCAGGTGATCGGCTACCGACGGTGAGCC
CGGGATCTCTCCTCCGCTGCGGCACAACCGCACCAGTCTGGATGAACGGA
GAACACCCAACTATCGCTGACGGGGTAGTGACGCGTCAGGCATGTGCCTT
CTGGACCTTCTGGAACATAGTTGAGCCCTGTTACAACTCCTGGAACATCG
AAGTCACGGCTTGTCCCGGTGGTTTCTACATTTACTTCCTGACACCCACC
CCAGACTGTTCTCATGCCTACTGCGTTGGTATGAAACATTTCGTTCAGAG
AAATATATCTAAACTGTTTGATTAAGGTAACAAGACTGGTTAACATGACT
TACCCAAAATTATTAATCTAATCACGTAGCTATTTGATTCGTGGCATGTA
AAAAATTATAAATATCATTTGTTATTGCTGTTATTTACTTTACGTGGAAA
AAAGGGGAAACATAACCGGAAGAGTCATTATTTCCATTTTTTTTTACATT
AGGTACGCAAGGATACCTAAAGATGTACTTTCATAAAAATACTACATACA
TTTATGTGTAAAAATGATGATTTCTACAATCTTGACATATTTATACAGAG
AACGTACACGGCACTGCCGATGGGACTGTGTCGATGACAACTACCATTAA
CAACAGGTAAGTTGTGTTCACACATTCACACGTAAATATATTGTTTCGGT
TGGTACTTTGTATACAGAAACTACGATTATCAACATCTTCTATCGACCTG
TATAGAAACTACCATAATAACATGTACGGATAGATTTGTCCTATCCGTAT
GTAATTATAGTAAATGATATTAATATACGTAGCTCTAGTCCATCGTATAG
AAATGTTTCGTTGATGGTATACTGCAATGGTAGGCTAATGTCAAGCCTAT
GTGTCCATGTATACATGTGGATTTCATGATGACTTATTCAGAACATGCAT
ATGTTTTATTGTAATGTTTATTTAGTCACGTATATCAACGATAGTCAATT
AATTGTGCACCTCTGTTTGTCCTACAGTTACGCACTAAGCCTTAAAATAC
TCCTCTTTTTTTCAGAAGCGACTAGAACTGTATGCAGCAGCAAAAGCAGC
AGTGTAAAAACAACACACTCCAAAGAAGACAACAGTTTGTATTATTGCGA
AAGATCTGTATCCACAAATCAGTCTTATGTCAATAATTCGAATTCAGTAG
AATAAAACAATAAACTGTTCGTCGCAACTCACTACGCGGCCTTTAATTTA
TTCGAAAAGTGCAATTGGTCGTTTTAATTCTACGTAATTAGCACATTAAT
AGTTATCCAAAAATATCAGTTGAAGCGTAAAAAGTGGAGTGACAGCTTCC
CAATTGAAATACCCGAAACTAGCTTAGTGCGTATATGAACATATGCCAAT
CTACGATTAAGCGTTGCCAGCCTTCCTGATTTCACCAATAACCGCTGCCG
GTCCTCCGAAATTAACCGTTCATCGTTGGCACGATTTCCCGAATGAATGC
AGACCCTCCTAAGCGTTGAAAATCCAATAGAATTTGTTGAACTCTAAAAC
ATATCAGTTTTGTTGTAACTATGCTTGTCAAACATCGTCTGCATGTTGCC
ATACGTCATCCTTAGGACGGACCCAAGATACTGTCTACGTCACTGATGAC
GTCAGCGGCTGATTGGATAGTAGCCGTTATCGCCGCCACTTGCCTCTTTA
CTTCCTCCCAACCTGTGGAAAATTGTACAGCATGAAACTAAATCTCTGGG
CCAGAAAAGTAGCGCTATACCTTGACTATCTAAAACAACGAAAGAAGACT
TTATGATCGTGATAATAATACATAAATATAAGCTGTCCAAGGATAGGATG
ATCTAATTCTCTTTTCAAAGGCACTGATTCACACTGTATCAAATATGTGT
CATGATATTCCTACCACTACTTCGCAGACACCACTTAGTACTGCTGTGTA
AGTGATTCGTCATCATGATACAGTAGAAAGTAAGTAATAAAAGTATACAT
CAGGTTTTCTGGTTTTGTTGCACCCCCTATCTTCAAGTGACTGCGACCGA
TGTGAGACCAAATATTAGAGAGAATGCTTTACAAAATCGAAAGAATAAAT
TTTCTTTGCGTTTGTGAATTTGTTTTTATTTGAATGATACTTTTCACATC
TTAAGAATGCAAAAGGAATAAAGTAAGAATAGCTTAAATGTTCCTCACCC
TCCTCGTTGATTGGTCCGCCGCACATCGTCCTCACTATCCCGGGGAATGC
GGCGCTAGTGTTTGTCGCGCATCCCGATGGCGAGTAGAGAACATGTCTAA
TGTAAGACAAAAATCACTGGCCAATGTCTCATGGTAGTAACTGATTACAA
TAAGGATTGCATTTCTTTATAGTAAATGGCAAGATATGTAAATATACCAA
TGATGTGCAATGCCGTATGGATATAATGCTTGCCAAATGTACGCGTTGCC
CACAAGTACACGTCCAGGCTAAGAAAAGGTAGACAAAGTAAAAACTTTAA
GACAAAACAAGTGAGAGAGGGACACCGACGTTTATTTGGTCAGTGACAAC
GAATAATATGAACGCTGATGTCGTCCATATCCAAGATAGCGTGTTGGCGT
CGTGACAAAATGGATATGACGTATACTATAAACACATTTAAAAAATTTAA
CGCACTTATCGTTAGAGAGTTTCCGATATCATTCTAATCACGTGCAGCTT
TGCGATTTGCTATGGTGGGCTCATTAAAGGCATGGGCACTTATATATAGA
CATCAAAGACAACTTGATACTTGATCTATCCCATCTCCTCCCACTGTTAG
AACTTACTTGTTGAGATGATGAGGCTGGTGGATGTCAATGAAAGCTGTGT
TCACCTGGACCATCTGATCGTTTAGATGTCGGACCTGAATGGGGCTGAAT
GAAAGGAATAACGGAGTGTCAATCAAAGGATTTTATTTGGTTATACCACA
AGGACTATTAATTGGCATTTTCAATTACTACTAGTGGCATATTCGCATCC
TCGACCTATTACCTGACATATACATTCTTCTATCTTCACGGTTTCGGTAC
GCAAACATTTAAAAAAAACAATTTTGATTTTCTTTGTGCAGGAATGCAAA
ACGACTTAAAATTGGTAATTTGACAAATAGCCGTTCCAATTTAGCCATAC
AAATACAGTTAAATGAAAACTAATGTCCTGGAGTTGCACAAGAATCTTAC
AGTTGTAGTCATTTCTGATCATATTACCTGGTTGCATAGATGGTAAATTT
TCGGTGTACACAACTATAAAGAAGAAACACGATTAAACTGTGAACTTTGC
CTACTCCTTCTTGTCGATTGCTTGTGTCCGATNACGTTTCTACGTTTACT
TCCTGACACCCACCCCAGACTGTTCTCATGCCTACTGCGTTGGTATGAAA
CATTTCGTTCAGAGAAATATATCTAAACTGTTTAATTANTTCAGAGAAAT
ATATCTAAACTGTTTGATTATTATCTAAGGTAATAAGACTGGTTAACATG
GCTTACCCAAAATCATTAATCTAATCACGTAGCTATTTGATTCGTGGCAT
GTAAAAAATTATGAATATCATTTGTTATTGCTGTTATTTACTTTACGTGG
AAAAAAGGGGAAACATAACCGGAAGAGTCTTTATTTCCATTTTTTAGATT
AGACACGCAACGATACCTAAAGAAGTACTTTTATGAAAATACTACAGAAA
CACATTAATGTATAAAAATTGTGATTTCTACAATCTTGACATATTTATAC
AGAGAACGTACACGGCACTGCTGATGGGACTGTGTCGATGACAACTACCA
TCAACAACAGGTGAGCTGTGTTCACACATTCACACGTAAATATATTGTTT
TTGTTAGTACTTTGTATACGGAAACTACGATCATCAACATCTTCTATCGA
CCTGCATATAAATTACCATAATAACATGTACGGATAGATTTGTCCTATCC
ATATGTAATAGTAAATGATATTAATACACGTAGCTCTAGTCCATCGTATA
GAAATGTTTCGTTGACGGTATACTGCAATGGTAGGCTAATGTCAAGCCTG
TGTGTCCATGTATACATGTGGATTTCATGATGACTTATTCAGAACATGCA
TATGTTTTATTGCAATATTTATTTAGTCATGTATATCAACGATAGTCACT
TAATTGTGCACCTCTGTTTGTCCTACAGTTACGCACTAAGCCTTAAAATA
CTCCTCTTTTTTTCAGAAGTGACTAGAACTGTATGCAGCAGCATAAGCAG
CAGTGTAAAAACAACACACTCCAAAGAAGACAACAGTTTGTATTATTGCG
AAAGATCTGTATCCACAAATCAGTCTTATGTCAATAATTCGAATTCAGTA
GAATAAAACAATAAACTGTTCGTCGCAACTCACTACGCGGCCTTTAATTT
ATTCGAAAAGTGCAATTGGTCGTTTTAATTCTACGTAATTAGCACATTAA
TAGTTATCCAAAAATATCAGTTGAAGCGTAAAAAGTGGAGTGACAGCTTC
CCAATTGAAATACCCGAAACTAGCTTAGTGCGTATATGAACATATGCCAA
TCTACGATTAAGCGTTGCCAGCCTTCCTGATTTCACCAATAACCGCTGCC
GGTCCTCCGAAATTAACCGTTCATCGTTGGCACGATTTCCCGAATGAATG
CAGACCCTCCTAAGCGTTGAAAATCCAATAGAATTTGTTGAACTCTAAAA
CATATCAGTTTTGTTGTAACTATGCTTGTCAAACATCGTCTGCATGTTGC
CATACGTCATCCTTAGGACGGACCCAAGATACTGTCTACGTCACTGATGA
CGTCAGCGGCTGATTGGATAGTAGCCGTTATCGCCGCCACTTGCCTCTTT
ACTTCCTCCCAACCTGTGGAAAATTGTACAGCATGAAACTAAATCTCTGG
GCCAGAAAAGTAGCGCTATACCTTGACTATCTAAAACAACGAAAGAAGAC
TTTATGATCGTGATAATAATACATAAATATAAGCTGTCCAAGGATAGGAT
GATCTAATTCTCTTTTCAAAGGCACTGATTCACACTGTATCAAATATGTG
TCATGATATTCCTACCACTACTTCGCAGACACCACTTAGTACTGCTGTGT
AAGTGATTCGTCATCATGATACAGTAGAAAGTAAGTAATAAAAGTATACA
TCAGG Coding sequence (CDS) from alignment at Sc0000158:104700..111154+ >Blg01229.1 ID=Blg01229.1|Name=Blg01229.1|organism=Branchiostoma lanceolatum|type=CDS|length=489bp|location=Sequence derived from alignment at Sc0000158:104700..111154+ (Branchiostoma lanceolatum)
ATGACTTTATTTGCTCTGCTTCTAAGTATGGTCATCGCAGCATCTGCGGG
GCCTTGTGACGAGTACTCAGAGTTGAGCGACACCTGGCGAAGTGTTAACA
ACAAGCGGCCACCTTTATTTTGTGACCGAGGACTTACCGCAGGCTGGTAC
CGCTTCACCGGGCCTGCAGGTGATCGGCTACCGACGGTGAGCCCGGGATC
TCTCCTCCGCTGCGGCACAACCGCACCAGTCTGGATGAACGGAGAACACC
CAACTATCGCTGACGGGGTAGTGACGCGTCAGGCATGTGCCTTCTGGACC
TTCTGGAACATAGTTGAGCCCTGTTACAACTCCTGGAACATCGAAGTCAC
GGCTTGTCCCGGTGGTTTCTACATTTACTTCCTGACACCCACCCCAGACT
GTTCTCATGCCTACTGCGTTGAGAACGTACACGGCACTGCCGATGGGACT
GTGTCGATGACAACTACCATTAACAACAGAAGTGACTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg01229.1-exon-Sc0000158-1570713199:104700..104771 | Blg01229.1-exon-Sc0000158-1570713199:104700..104771 | Branchiostoma lanceolatum | exon |
| Blg01229.1-exon-Sc0000158-1570713199:105475..105550 | Blg01229.1-exon-Sc0000158-1570713199:105475..105550 | Branchiostoma lanceolatum | exon |
| Blg01229.1-exon-Sc0000158-1570713199:105906..106277 | Blg01229.1-exon-Sc0000158-1570713199:105906..106277 | Branchiostoma lanceolatum | exon |
| Blg01229.1-exon-Sc0000158-1570713199:106598..106655 | Blg01229.1-exon-Sc0000158-1570713199:106598..106655 | Branchiostoma lanceolatum | exon |
| Blg01229.1-exon-Sc0000158-1570713199:110216..111154 | Blg01229.1-exon-Sc0000158-1570713199:110216..111154 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000158 | genome | Sc0000158:104700..111154 + |
Properties
| Property Name | Value |
|---|
| GeneID | Blg01229 |
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