|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000158:406156..411908+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg01227.6 ID=Blg01227.6|Name=Blg01227.6|organism=Branchiostoma lanceolatum|type=mRNA|length=5753bp|location=Sequence derived from alignment at Sc0000158:406156..411908+ (Branchiostoma lanceolatum)
GTTACATCCTAATTGCAGTTGATTCATAAATTTTGGTCAATCTATAGCCC
AAAGTTGTCTGGATTTAGAGTCTTTCTGGATGTCGCCTGTTTTGATCAAG
TTACTGTGGCCTTCTTATTTCAATAACCTTGTATCAGCCATCTCCCTTGC
AGGATGGAGGGACTCCACTCTTTGTAGCCTGTCAGTGCAACCACCTGGCT
GTAGTGAGGGAACTGTTGGGGAGGGGGGCCAACATACATGCCACCATGGC
AGTAAGTATCCTCAACAATATCTTTATAGATGTTAGCATGTAAGTTCATC
TGTGTTTGGGAGAGGGAGGGGGGTTAAAGTGACCCAGGTGTCTTGAAAAG
ACGCATAGGGGTGGCACCCAGCTCCATTTCTATAGCCCTTGGGCCACACA
TTTGTGCAATTCGCTACAGCAGGGGGCTAGTGATGTGTGTTAACTACCAT
ACTGTTTCCCAAATTCTGAGTGCTAATTATAAGCAGACAAAGCTGTATGT
ACATGTACAATTTTATTAGTCTTTGGTATGACCCGGCCGGGATTGAACTC
ACGACCTACCGTATGAGTCAAAGTGGTGCTTAACTTAGGATTGAAACGCC
TATAATTGCGATTTTCGGACGAATTTGAGGGAATCGACAAGTTAACTGGC
TTTGAAAGGGTTGTAAGTGTTGATGACTCACAGAAAATTTACTCACTACA
ACTTGGAGCCATGACACCCAGCAAGATCTTTCAGGCTAAAAGATGCACAA
CAAGATCTTTCAGGCTAAAAGATGCCCAGCAAGATCATTTAGGCTAAAAG
GTAGTTAACTAGTTATAGGAAACAAACAAACAAAAAACTAACTTGTTTTA
TTACAGGATGGTGCAACTCCCCTGTTCATTGCAGCCCAGAATGGTCACTG
CAAGCTCCTCAGATTTCTGCTCTCTAAGGGTGCCAATGAGAACCAGATAA
GAAAAGTAGGTTACATCTCTCTTTATTATTTTGCAGCTATTTAGATTAGC
AGGGGTAAATTTCCCTTCAGAACAGTTGAATTCCTGTAGAAAAATGATGA
AATATCTTGAATTATCCCTTTCCACAAGGGGCTGCAACAGCTGAGTGACC
AAATGTTTTGATTACTTGAATTTCATAGGCAAAGAACAAATTTCTTTGTG
TTTTTTGTGTGTTTTCTTGTCTTGTAAAACATACTTTACACCTTAAATCA
TAATCAAAATGATGTAATCAAGAGTGACACAAATACAATTTTTAAGCTGA
ACAGTTGCTCAAAGAAGAAAAGTTGCTCAGCGATCGTCTTCTAGTGGAAA
GCAGCAGCACAGTAGACCTTACTTTTGATTGTATCTTTTGTCTTATGTGA
CTTAGGTGTAAATCAAAAAGTGAAATGATAGAACTGTATTTGTCAAAAAT
TGGTCGATGTTCTAGACACATTGGACAACATTCAAAAGACATCCCTCATT
TGGGGACAAAGATGGACTAAATTGTAGCATTTTGAAGATACATTAATTAT
TTCAACAAATCCTTGAAGGAAATCAACAAAACTGTTGTTTTTGGTCTAAA
CAGACATGATGTAGTACAGATACTGTAAATGTTGAAATGTTGTGTTGGTT
TTATTATGAATTCATGGTTTTTGTGTTGACCTCTCCATAAATGCAAATTA
GTATTTCCCGAATTGCTTCAACTGTGAACTTAAGTTAGAGTGCTACGAAC
TTTCCCCTTCTATTGTGAAGTGAGTTTAACAGCTGTCTTTAAATTGTGTC
TTTCAGGACCGTGCCACACCCCTGTGGATAGCGTCCCAGATGGGCCATGG
TGATATTGTGAGGGAGTTGTTAGATGCAGGTGCACAGGTCGATGCTGCCA
GGGAGGTTAGTCATGTGGTGGTACATCAAAGTATGAATATTTGGAATTGT
GTGACCTAATGGTTAGAGTACATGTTTGGATCAGAATCCAAAGGCTCTGG
GTTCAAACCCCTGGCATGTCCCAATTTTGTGCCCTGATGGAATAGTTCAA
TACACGTTTGCGCAGATTTCCTGACTTCATTCGCTGACAGAAGAAAATGA
GTACCTAAATATGTAGTAAGCTTTGACTAAGGGTAAATGTTTCTCGGATA
GGATGTTACATGTAGATGGATGTCCCATGTTTGAGGAGAGCTAGCCTAAC
CTCATGCACATTAAAGAATCCACCACACTTTAAGGAAAGAGTCCTGGAGT
GATTGATAATAAAAACATTATTATGGCCATGTTTGGGGCAATTACTGTTA
AATGCAGTTGTATTGACTCAGACTCAGAGGTAAAAATAGCCCTGATAGGC
TGCCATTACAGACCCTTGTGATTGTCCTGCCAACTGTAAACGTCCTGCAA
TTTAACCTGGGCTGCAAAAAAAGAGTAGTTGACCCAATAACAATACTAAT
AACAATAGTCACGAATCAAGACTTGCCGGTTGAATCATAACATGTACATT
GTTATTCAGATACAATTATTGATAGTATTTGATGCCCAAAAAAATATTGA
TTTAGTCTTGTTCATGCTGTGTATGTAGGATGGAGCTACTCCACTGTTTA
AAGCATCACATAAAGGACATGTGGAGGTTGTTAGGAGCCTGGTCAACCAT
GGGGCCACTTTTGAACTTTTAAATGTGAGTACTACCTTATATTTTATTGA
TAACATTTGACACTTATCCTGTCCATGGTGCTGAATAACCATTCACACTG
GTTCTGCACAAAATCTACGCTGTTTTCAGACTTTGGTGCTGAACAGGTTT
CACAGTGTTGCTTGTACTGAATAGTATTTATATCGCACCCAATGAATATA
CATTGTACCATGATAATAATCAGTGTTAACAATGTCAGATCAGATTGAAA
TGTAGATTTTTCCTATTAAGTATCAATAGATAATCTAGTATGGCAGCTAG
TCTTACTAATTGTTTTTGTATAGAATCTATACTACATAAAAACATATGTC
GTGACTAATAAAAAGATATATTCAACAATCATTATTATAATAAGTTTTCT
CTCTTTTCAGAATGGTGAAAGTGCCTTACATGCTGCGGCATTATTTGGGC
ACTTAAAAGTTGTCAAGGACTTGGTAGCTGCAGGAGCAAATATCAACTTG
AAAAATAAGGTAACAATGTTTGTGTATCAACTTCAACATTTCTTGTAACA
GTTCAAAATATTATTAGCTCTGTGACATTTTGATATAGTAACTGAAGATG
CTAATTTGTGTTTGCCTTCTTTATGTACAGTATCGGCCTAATGTCTTATT
CGTAGTACAATTGTTGTACGGTTGCAAAGCATTTTTTGGACAGTCGTGCA
AGTGCCTTTAGCATGATTCTGCTTTTTTGTTACCAAAAAGGCTGTGTTAG
ATCCTTTTTAGCAGCTGGTTCTATCACAGCCTGCTTAAAAAATCCTACGA
CATAAAAATTGAACAATGACCTTCGACGAATGAGACCGTGCCGTATTTGT
AACGGTTACATTTCTTCAAATCTGATGTAAGATTTATTTGTCCTTGATTC
CTACAGGAGGGACTGACCCCAGCCGAGCTGGCAAGGGATGCTGGGTATGA
TGTCATAGCAGAGTTTCTCTTGAAGGCTAGACCATCTTACCAGACAACAG
TATGAGACATTGTAACTGTTACAATTTGTATGTAGAGAAAATTCAAATAC
TGTACCACATACACTGAAGAGTGTAAACCCAAGTCATCGGAAACCTCACA
AAATATGTTGTTTTTTTATTTGAGAATTTAAAGCCGCTTATTTTCTGAGG
AAACAATTGAAATAGATTGAATTTAATTTGAAAGATTATATCTAAGCCAG
TTAGCATAATAGAAGAGAATCTATGATGACTGTACAAATGTAGATGATGG
CATTCAGTGTCGAGCTGAATGAATAAAACTGTGTTTTAGATACTTGATGA
TGCACCTTTTTTTTTACCTTGAGTTGATTATGATTTGAATTCTTAGAGCG
GCTGTTATACAAGCGAGATATGGTAGATATCTGCATATCCTGGTTAGAAC
CCTACAAGCTTAGCATAGACACATAATTAAAGACAAAATATTGTGATTGG
ACATCATTTAGTTACTTATAGGCCTTTCAACTAGCATAGGGGGCAGAGGT
GGTATTAGGTCCACTATCTAGCCCAACTCAGGACATGCTAGCTCGATGAT
CCTTGTAGAAACCAAAAGGGGTGGTACAGCACCAAAACATGTAACAGTTG
TTAATGTGAACAGTAGGTGAATAGTGGTTGCCCAAACTTGCATCTTTGCT
GTTGTTGCATCTTTTTCGTGTTGCTTTGAGTACGTAATTGCAGATAATCT
GTACTATGAATATTCTCTGTATAGCACAATGACCTCTGTGTAAGATAAAC
AGGTGAACTGGCCTGAGTGTGAGAAAAAGTAGGAAGGAACAGTGAATTGA
GTGGAGAAGATATGAGTATGTTGTGCAGTATGAAGTGAAAAGGGTTATGT
ACACAATGTCATGTATTTTCATAGATTACCCAATATATTTAAGTTTTTAA
GTTTTGATTCATACCTCTTCAAGCACATGGGACTTATTGTAGTACATGGC
ATTGTACAAATGTATGACAATCGATGTACATGTATAGTCAAGCACATACA
TAGTATGTTTTACCTTTATGTTAACATTGACAGTCAAATAATTACTCATC
TTGTAAACCACATATCGCACTGTTCACCTGTTTGTGCCCACTTAAAGAAT
GTGGTGCACAATTTGGTCCAGTTCTGTAAGATTCCCACTTAAGCAAGGAA
TGCCGTTTTGAGCTGATTTGGTTCTAAAATCATCAAAACATTGGGCCAAA
TTTGGCTGTTTTTTGCCAAAGGTCTCAACATCCACATATCATAGGACGTC
AATTACTTGTACTATTGCCTTAATTCAAGCTGAATCATTTTTGATATTTA
TATCCATATTGTATAAAATGACTCGAATCAGACAATCCAGCTAATTGTGT
TTTCAAATACATTGTACAACTACAAGCTTTATTCAAGCACAATCAAATCT
GTGACCACCTCAACATAAATACCACCTGTCCAGTGGTGGTCCCTGAGGCC
TGCTTTTACACACACATTTTCAATCGACTCAGGGTTGTGTGTGAGGAGCT
TTTGGCTGCTCAAATGGAGTTTGCTTACTAGAAAACACTACTAGAGTGGC
CTAGGGTTCTCCTTGCACAGTCCTGAGACGACTCAATTACGCATGGGTAA
ACCGGGCCTTAAATCATTTTTCCCATCGACAATCCTATAGTGACCAGATT
TTGTTGGTCCCCTTGAGTCTTGGTCAGTTTTTAAAAAATTTTTTTAATGA
TTGGTCACTTTACCTCTTGCTTGATTACCAGTGAAGGATGCTTTGACAAT
CCGAGTCAGTACTTATAATGCAAGAGTAAGTTTATCTTTTATTTTTGAAA
TATTGTTCAATGTTGTGAGATACAAATATTCATGGCATAATAAATATTGA
AACTGAACCTGGAGTTGTGTTTTCTTCCAAACTTATGCAGAGATGAGCAT
GATTGTGTGAAACTTTAAAAAAGTATGCAAAAACAACACTTGTCCTATGA
ATTTTGTGTTGAATAACTAGCTGTCCATCAACATATTAATTAGTAATATT
TCTGTGAGCAAATGAAAAAAAAAACATGGAGAAAATCTGTTACCCAGTAT
CACTTAATGTTAACATCCTAAATTTGTAAGAGTGTGTTATATTAGCCATT
GTTACTATTACAAAATGTACAGTTTTGCACTTTCTGTAAAATAAATACCT
CAG Coding sequence (CDS) from alignment at Sc0000158:406156..411908+ >Blg01227.6 ID=Blg01227.6|Name=Blg01227.6|organism=Branchiostoma lanceolatum|type=CDS|length=498bp|location=Sequence derived from alignment at Sc0000158:406156..411908+ (Branchiostoma lanceolatum)
ATGGCAGATGGTGCAACTCCCCTGTTCATTGCAGCCCAGAATGGTCACTG
CAAGCTCCTCAGATTTCTGCTCTCTAAGGGTGCCAATGAGAACCAGATAA
GAAAAGACCGTGCCACACCCCTGTGGATAGCGTCCCAGATGGGCCATGGT
GATATTGTGAGGGAGTTGTTAGATGCAGGTGCACAGGTCGATGCTGCCAG
GGAGGATGGAGCTACTCCACTGTTTAAAGCATCACATAAAGGACATGTGG
AGGTTGTTAGGAGCCTGGTCAACCATGGGGCCACTTTTGAACTTTTAAAT
AATGGTGAAAGTGCCTTACATGCTGCGGCATTATTTGGGCACTTAAAAGT
TGTCAAGGACTTGGTAGCTGCAGGAGCAAATATCAACTTGAAAAATAAGG
AGGGACTGACCCCAGCCGAGCTGGCAAGGGATGCTGGGTATGATGTCATA
GCAGAGTTTCTCTTGAAGGCTAGACCATCTTACCAGACAACAGTATGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg01227.6-exon-Sc0000158-1570713199:406156..406406 | Blg01227.6-exon-Sc0000158-1570713199:406156..406406 | Branchiostoma lanceolatum | exon |
| Blg01227.6-exon-Sc0000158-1570713199:407012..407110 | Blg01227.6-exon-Sc0000158-1570713199:407012..407110 | Branchiostoma lanceolatum | exon |
| Blg01227.6-exon-Sc0000158-1570713199:407912..408010 | Blg01227.6-exon-Sc0000158-1570713199:407912..408010 | Branchiostoma lanceolatum | exon |
| Blg01227.6-exon-Sc0000158-1570713199:408684..408779 | Blg01227.6-exon-Sc0000158-1570713199:408684..408779 | Branchiostoma lanceolatum | exon |
| Blg01227.6-exon-Sc0000158-1570713199:409166..409264 | Blg01227.6-exon-Sc0000158-1570713199:409166..409264 | Branchiostoma lanceolatum | exon |
| Blg01227.6-exon-Sc0000158-1570713199:409662..411908 | Blg01227.6-exon-Sc0000158-1570713199:409662..411908 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000158 | genome | Sc0000158:406156..411908 + |
Properties
| Property Name | Value |
|---|
| GeneID | Blg01227 |
|
