Blg01226.0 (mRNA) - B. lanceolatum

Overview
NameBlg01226.0
Unique NameBlg01226.0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000158:483357..485500+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg01226.0 ID=Blg01226.0|Name=Blg01226.0|organism=Branchiostoma lanceolatum|type=mRNA|length=2144bp|location=Sequence derived from alignment at Sc0000158:483357..485500+ (Branchiostoma lanceolatum)
CCGGAAGGCTGGGTCTATAAATATGAGAATCGTCTCTGACAGCAAACAGT CACAACCGAAAGCTGATAGGTGAAGAAGAACCAGTCAGGAAAGAAGATAT TGTAATTTGGAGGAATCTTTGCAATTGATTAACTGAAGTTCAGGAAGATG GGTCCACTAAGTGAGTACTTTTACTTTGCTTCATTGAAACATTTTAATCT GTGCGTTCTCTTAGCGTAGGCAATAGTGACAGATTTGAGCTTTTTCATGT TTGGAGACATTTGCCGCATTGTACATTGCAGTGCATCGAAGATTCTCCGT AGCTTCATGTATTAACTTTATTCTATTAGGCTTGAAAACGTTGTAAGATG ACAACCTCGATTCCAGACTTGTACCAATCTTTCAGGAAAGCTCACAGTTT TTTCACTATTGAAAATACCACATCAAAATAAATGATACTGTAACATTGAC AGTGCGTCCTTTGAAACTGCAGGCGTAAATGTTGCCAGGCAGCTGCTCCA ACGTCAGATGCACATCCTGAGATCTGTGTCGAGTGACGTCAAAGGGAGGG AGGAGCGACTGCAGTGTATGCAGGACAAAGTGGAGACCCTGGAGATCAGA AGGAGGCTGCAGGATGGCCGCATGGTAAGGAATACTCAGACCTGTATTCT TATATGGAGACCGGTACGATGGTGAAGTGAGTAGAGTTATCAACTTGCAT TCGGTATAGGTCGTGAGTTCGATCACCGACCGAGTCATACGAAGACTTTA AAAGTGGTGCATATTTACACGGTGCTTTCTCTGCTTAGCACTCAGCATTT CGGATAACTTCAAGCATATCAGATGAAAATGCACTTCTCTACCAGTGGGT GAGCCCCCTGCTGTAGTGATTGCAGAATGTTTCTGTGGCCCAAGGGCTAT TGAACTGGAGTTGGTGCAGTAAAGATGTTAAACGCACTAGGAAAGTGTTT ACCTTGTCCTGCAACACTTTGTTTAAAATTTATTGGAACACATTGAAAGA TCTAGAACTGTTGTGTTAAATGACAAGGAGTCTGTAAGCGTGGGACATTC ATTTGGGGCAGCCCAAGTAGACTTCACGTTGACGTCCAAAGCCCCAGCCA CCCGTGACTCTAAGTATAACGAGGCAATAATGCCAATAACATGTCTTCTG TTTCTGCTGTGTTTGTCTACAGACCCACAGACAGCCCACCACACGACGTG CCACTGAGCGTCATCAATGACAGCTGTATCATCACAGACACGTCTAAAGA TAGCATCGAGGCATCATTGATCCATATGTCTTCTGATGAGGGTTATTCCA CTTGTAAAAACGAACTGCGATGATGCAGATACCCAGATAGAATTTACATC CCGTTTCTTAATCTTCTCCCTTGTCTTATAACCGAAGTATGATATCGTCA TTAAGACATTCCACTGTTTCATTTTCATCTGTAATTATTTATCAAAACAA CCTTAGATTACCACGTTTTTCTTTATTCTTTATCCCTTATTAAAAATTGC AACAAGACAATACATAGTGGAACGCCAGGCAGCCAAGCTGATGTTGCGGA CCACTTAACAAATGCATTACCATGTTTGTCCTTGTAGTACTCAGTAGTAG TAGCAGCATGCGATTTGTTTGGGCCATGTTCAGTTGATTAGTTTATGATA CTTTTATGATGTTTGAAATAATATTTACGGGATCTTTTATTGTATATTGA TGTATGACATAACATGATGTACGTGTGGATCTAAGGCTTTCATCGTGTAA TTGTATCAAACATGTCAAGTACTACTAATTTAGTCATGAAAAAAAGCTTC AAAAGTTCCTATGGAAATTTACAAAGGAACATAGTCAATGAAGGAGGACT CATAAGCATATAAGGCAACTTAGAAATAAGTGTCTAAATCAACTTTGTAT GTATTCAAGAAAAATTAAATTCAATAAAGAAGAATTTTGAAAGATGTCTC TCTGTCCCTAGTCTGTTTTACAAACAGTTTGAACTCCATGTACATGCTAG AGTTCAAAGTAGATGCTCTAAGACAACAAAATGTCATCATTGTCAACATC AATGCCACTACAATTATAGTCATACATGTCGATTGGCAGACGATTAGAAC TTGCACTATCTAGGTCTAATGTTAACAGTTTCAGTCAATTCAAT

Coding sequence (CDS) from alignment at Sc0000158:483357..485500+

>Blg01226.0 ID=Blg01226.0|Name=Blg01226.0|organism=Branchiostoma lanceolatum|type=CDS|length=213bp|location=Sequence derived from alignment at Sc0000158:483357..485500+ (Branchiostoma lanceolatum)
ATGGGTCCACTAAGCGTAAATGTTGCCAGGCAGCTGCTCCAACGTCAGAT
GCACATCCTGAGATCTGTGTCGAGTGACGTCAAAGGGAGGGAGGAGCGAC
TGCAGTGTATGCAGGACAAAGTGGAGACCCTGGAGATCAGAAGGAGGCTG
CAGGATGGCCGCATGACCCACAGACAGCCCACCACACGACGTGCCACTGA
GCGTCATCAATGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg01226.0Blg01226.0-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg01226.0-exon-Sc0000158-1570713199:483357..483516Blg01226.0-exon-Sc0000158-1570713199:483357..483516Branchiostoma lanceolatumexon
Blg01226.0-exon-Sc0000158-1570713199:483829..483980Blg01226.0-exon-Sc0000158-1570713199:483829..483980Branchiostoma lanceolatumexon
Blg01226.0-exon-Sc0000158-1570713199:484529..485500Blg01226.0-exon-Sc0000158-1570713199:484529..485500Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000158genomeSc0000158:483357..485500 +
Properties
Property NameValue
GeneIDBlg01226