Blg01220.0 (mRNA) - B. lanceolatum

Overview
NameBlg01220.0
Unique NameBlg01220.0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000158:305180..306641-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg01220.0 ID=Blg01220.0|Name=Blg01220.0|organism=Branchiostoma lanceolatum|type=mRNA|length=1462bp|location=Sequence derived from alignment at Sc0000158:305180..306641- (Branchiostoma lanceolatum)
ATGATGAAACATCTTGACACTCATGGCGTTCTGTCCCCGGCGCAGCACGG TTTCAGGAAGGGTCTGTCCTGTGAGAGCCAGCTGGTACTCACCCTCCAAG ACTTGGCCAACAATCTTGACCATCACAAACAAGTCGATGTCGCGGTGCTT GACTTTAGCAAGGCATTCGACACCGTACGCGTGCCCCACGAGCGGCTGCT AAGCAAGCTCGAGCACTACGGCATGTCTGACCTTCTTCAGTCTTGGTTTA GGGCCTTCCTAACAGAGAGAACCCAGAGGGTTGTCTTTGACGGCGGAACA TCTGAAGCTGTCAGGGTCACCTCTGGAGTCCCTCAGGGTACAGTGTTAGG CCCTTTGCTCTTTTCACTGTACATTAACGACCTCCCCAGCTCCGTAGATT CACACGTTCGATTATTTGCCGACGATTGCTTGATTTATCGAACTATCAGC ACGCCTTCTGACGCACAAGGTCTACAGTCTGATCTTGATGCGCTAACAGA TTGGCAAAATCGTTGGCTTATGTCGTTCAATCCCTCTTAATGCCACATCC TCCATATCACCCGTAAAAAGCACCCCATCCTAACCCAGTACTCCCTAAGT GGAGAAGCCCTCATCGGTGTCAAGTCCCACCCCTATCTTAGAGTACAACT GTCCGACGATCTGCGGTGGGACACCCATATCAACTACGCCACTAGCAAAG CCGGCAGGGTACTAGGGGTCATTCGGCGCAATTTGACCCATTGTCCATCT AGGGTCAAGGCCACTTGTTACAAAGCGCTGGTGCGGCCCCACTTGGAATA TAGNACCCGAGTGGAACGCCCTGCCTGGCGCGGTTGTTACGGCTCCCACC GTTGAGTCTTTCCGCGCCAGGCTGGAGGCCTGCCCGCCTTAGCCTGGGAC CTCCTCCCCCCCCCCCCTACTTTGCCCCTAGCGGGGTTATTTGGGGGTAT CCATGATGATGATGATGATGATGATGATGATTTGTGCAAATGGCTGAATA AGGGTTCCAAACGTGAACGATGCGGCTCCAGATGTCTTACTGAAGGACGA TTGCGGTGCGAAAGATGTCGGTTAGCTTGAGTGCCTCCTTCCCCAATTCC TATGTATATTTCTCATTGGATGGGACTCGCTGTAGTATCTTCTGGACCTC CGGACCCAGATAGATCCCGTACATCAAAGGAATGCACACAGAAGCAAGAA GAACCTTCTACCAAGACGCTACCTGGAGGAAAACACCACCGCCAAGTCGA GCACAAGGAAGACACGTAAGTACCACCAAGTGCGCCACAACAACGGCACT GCCCACCACACCACCGAGAGGAGACACTCCAAGAACGTCATCTCCGTGAT CTTCAAGCCCTACAAGAAGCTGAGACGCCAGAGCTTCACGCCAGAGCAAG AAAACAGCGAAGGGAGAAGACAACACTTAAGAAGACGCATCTCTCATCCC TCGATTGTGTAA

Coding sequence (CDS) from alignment at Sc0000158:305180..306641-

>Blg01220.0 ID=Blg01220.0|Name=Blg01220.0|organism=Branchiostoma lanceolatum|type=CDS|length=804bp|location=Sequence derived from alignment at Sc0000158:305180..306641- (Branchiostoma lanceolatum)
ATGATGAAACATCTTGACACTCATGGCGTTCTGTCCCCGGCGCAGCACGG
TTTCAGGAAGGGTCTGTCCTGTGAGAGCCAGCTGGTACTCACCCTCCAAG
ACTTGGCCAACAATCTTGACCATCACAAACAAGTCGATGTCGCGGTGCTT
GACTTTAGCAAGGCATTCGACACCGTACGCGTGCCCCACGAGCGGCTGCT
AAGCAAGCTCGAGCACTACGGCATGTCTGACCTTCTTCAGTCTTGGTTTA
GGGCCTTCCTAACAGAGAGAACCCAGAGGGTTGTCTTTGACGGCGGAACA
TCTGAAGCTTACTCCCTAAGTGGAGAAGCCCTCATCGGTGTCAAGTCCCA
CCCCTATCTTAGAGTACAACTGTCCGACGATCTGCGGTGGGACACCCATA
TCAACTACGCCACTAGCAAAGCCGGCAGGGTACTAGGGGTCATTCGGCGC
AATTTGACCCATTGTCCATCTAGGGTCAAGGCCACTTGTTACAAAGCGCT
GATAGATCCCGTACATCAAAGGAATGCACACAGAAGCAAGAAGAACCTTC
TACCAAGACGCTACCTGGAGGAAAACACCACCGCCAAGTCGAGCACAAGG
AAGACACGTAAGTACCACCAAGTGCGCCACAACAACGGCACTGCCCACCA
CACCACCGAGAGGAGACACTCCAAGAACGTCATCTCCGTGATCTTCAAGC
CCTACAAGAAGCTGAGACGCCAGAGCTTCACGCCAGAGCAAGAAAACAGC
GAAGGGAGAAGACAACACTTAAGAAGACGCATCTCTCATCCCTCGATTGT
GTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg01220.0Blg01220.0-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg01220.0-exon-Sc0000158-1570713199:306333..306641Blg01220.0-exon-Sc0000158-1570713199:306333..306641Branchiostoma lanceolatumexon
Blg01220.0-exon-Sc0000158-1570713199:305862..306053Blg01220.0-exon-Sc0000158-1570713199:305862..306053Branchiostoma lanceolatumexon
Blg01220.0-exon-Sc0000158-1570713199:305180..305482Blg01220.0-exon-Sc0000158-1570713199:305180..305482Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000158genomeSc0000158:305180..306641 -
Properties
Property NameValue
GeneIDBlg01220