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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000158:411131..418473- Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg01218.2 ID=Blg01218.2|Name=Blg01218.2|organism=Branchiostoma lanceolatum|type=mRNA|length=7343bp|location=Sequence derived from alignment at Sc0000158:411131..418473- (Branchiostoma lanceolatum)
CAAACATCACAAAAGGGACACCTGTGTTGTGCAGAATTTCATTTTATTCA
CACATTTTGTATAAAAATGAAAGACAGTGACTATGAGTCAATACATATAA
GTGATATAGATACATTCGTACAGAAACAAATGTCGAGAAAAGCATTGTAT
TTACAGATTTTTAAACATTTATCTCCCTCTAAAGTAATGTAGATGGTACC
ACACCCTCTCGTCACATGACGTACCTTGTGACCGGTGACGTCACGAGTCG
TCTGTCTGAGGAGCTCAAATTACCAGCTGAACCCGCGAAGGAAGGAAGCA
ACATTTTTACTTTCTTGACGTTTTTCGGTTGTAAGTATTCATTCTTTTCG
CTTTGTGAGCTTTCCTTTTGGTTCTCGACCTCATGTTTTACAAATAGTGA
ATGATGTTATGGTAGAGGAGGTTTCAGTTTGATATTTTTGGCCCAAAACT
GTATGACGCAGAACATATTTTCTTCAAAATTCTTCCTTCGAAAAATCTCA
AGTCTCAGGAGACTGTCAGCTTAGGGCTTGGTAAGGAAATGACATAGACA
TATAGATAGATAGGAAGCAACACGCTCTTGAAATTCATGCTTATCAATTT
TGTCAAACAAAATCTAACGTTGCACCTATTCTATAAATGTATATCACTCA
GTGGATGTGGTGGGCAGGTAATGTTTTAATATTAAGGGGGAGTTAACCTA
CACACCTGTTAGTCGGATCTAAGAAAGAACAGGTGAACCTTTTTTTTTCT
CTGAGCAACAAGCAAAAGACGTGTGGATACGATGAAGTATTTTTCAATCT
TATTGTCATCATTTATATTTAAAGAAATGTCCAATCAATTATGGTAACCA
AATTTACAAACTTTCTTGCATTACATTTATTTCTGTCAATTCCGTAATGG
CTAGAGTCCTACATGGACATGTAAGGTTTGGTTTATGAATATCATCACCA
ATAACGGAGACTAAGATCTTACACTTTCAAGGTCTTTATTTATGTTTTTC
ATGGTATCCGTTCTTAGTCAATGTCTTCATTTTTTTCAGGAATTGAGAGA
AAAAGAGAATCCAAGATGTCGCTGTACCCATCACTGGAAGATATGAAGGT
GGACCAGATGGCCAAGGTAACTACAGCACATGTACTTTTTGTTCTAGTGT
TAAAATTCTTCTGCATGATGTTGGCATGTAGAGCAAATTAAAACAGTTTC
ATTCTCGTATGATAAGGAAAGATTGTCACAGTTGCTTTGGCCTTTGCATA
TGAAGGTTCATGCAGTAAGTTCTGCTAATATGAGATCAGAGAACAGAAGT
GATGGCCATGCTAAAGTGTTGTTCATTTTAGATATATTTAGATTTGAAGC
TATTGGCATGTTGTGGCTTATTGTTGTCATATTCTACCAATCTGCTGTAC
AACCAGTGATAAATATGAGGTGATACTGTAATTCTTGAAATTTTTGCGGT
GACTTCACATGTTCTCAGTTTTTTTGGTGACCCTTCAAATCTGTAAAGGC
ACATTGTTTCCATAACTGTATAGTATGTGACTACAGCACAAAGAAGAAAA
TGTAGCTTTCACAGTTTTGGTTGCTTAATGCCCCACTTACCCTGTACTGC
GAAATTAAAACACAGCAAACTTAAGGCATTTACAGTACCATAAATATTTA
TCTAATATGTGTGCTTGTCCCTTCAGGCACAGGTGTGCCAGGCAGGTCAA
CAGGCTGCTGCTATTCAGGCACCTCCACAGTACCCTACCCAGGCACCGGC
CTACCCTACACAGCCTCCAGCCTACCCTACAGCACCACAGCCAGCTGGAG
CCATGCCAGTTGCTCAATGTGAGTATAAGCTGCTTCACAGTTTAAATTGA
GTGTGCATGTGTAGTGTGTTGCATTGAGGGTAATATGTAGCTCAAACCGT
GAACTGGCTGATTGTCAAATCCATGCAAACATTATAAATCATAAATACAA
TTTACAGTTTTACAGTTGAACCTTTTTAGTCTTTCAAGGGACTCGTAACC
ACTATACTAGTACTAGTAGAGAAAAGGCCAATTTAATGACCATGAGTAGC
AAGAGACATGTGCTTTCAGTATCCACTGAGATACTTTTATTCATAAAAAC
AAATTGTGAAAATTGGACAGTCACATTTTTAGACTTACAATTCAGTAGTT
CTTACGTATACTATATACTGTTCAGTCCTAACGTTACATGTACACTTTAC
AAACAGTACTCGTTCTTCCTATACTGTACAGTACAGTACAGTACTACACT
TAACACTTTACTAACCTGTGTATTTATCTGTACAGTCAGCCTATACCCAT
CCCTGGATGACTACATGGGACTGAGTCTGACCCCAGACGAGGTGAGAGCC
AACATGCCACAGGTCCTGGAGCCACCACCATCGGTAAGTTCAACATTTCT
TACATGTTATCTTCTCCATGGCTTGTATTTGCTAACAAAAAGATTGGCCA
GGCCCTTTGATGGCTGTGAGACTTATCCTTGTACATGTGAGTCAGGTTGT
TGTGTGTGTCTGGGGATGCTGCTTAAGAACTTAACAGTGACCCCCTCTCT
TAACATTTCTTGTTGTGTGAGTCTAGAGATGCGGCTTTATAACCTTACTG
TGCAAATGCCCCCCTCCAAAATTTCCTTTATCATATACTAATACAAACAT
ATAGTTTTATCACAAACAAAAAGCCACTTCTACCTATATCTGTATTATAC
TGGGACAGTAAAATTAATGTATTCAGTTGTGATTGTTAGCATGGAAGCTA
AGACGTGACGGTGGCTGAGAATTCAATGAAATGCACATTATGAATAAAAT
CTTGAAACTTTTGTGGTGGTTTCATTCAATATGGTTTTTGAAGTGACCTT
TCTACTGTGACTATGTCTTCCTTGTGTTACCACAGTGACTGTACTTCAAA
AATCTCTTTTTCCTTCTTACCCCTTAAATGAAACAGCCATGAAAGTAAAA
GATTTTGCAGTATCCTATGTTTGACTGACTATCACATGAATGTGACAAAG
TTTCTATACCATGTTGTGAAACATTTTCCCTGCGCCCATGTAGCAGGCCG
TCGTAGCTCGTCCCCAGGGGACCGTGGTGACTGCGCCCATCACCGGGAAC
AGCGTGGGTCTCCAGCGCGCTGAGATCAAACAGGGAGTGAGACAGCTGAT
GTGCTGTAAGGACGCTAGCGGCAAGATCGGCCTCCGAGTCAGGCATGTCA
ATAAGGTGGGTGAAGTAAAGGAATGTCTGTATACTAAATCTCCAAGCAGA
GGAAACTGGGCATATGATAAGATGTGATGGTTCAAAGATAGGTAACTTTT
GTTTCTAACAAAATTCCTTTTTTTTTCTATAGTGGGGAACAACTGCCTAG
CACCCCATATTGTGTACATAGGCCCCATTNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNCATCAAAAAAGCCATAGAATTTCTCA
TTTTAACTTAGAATCCTCTAAAACTCCACATTTTAGAAGGATGGAAACTA
ATAGTATACTATACCCCCGTTTGGTTGCTTCCTTGCTATGCCACCACATG
TTTTTTTCTCTTGAAAAAGCCCTGTAAGATAAAGATTAAATTTTTATGTT
TTATATTTTCCAGGGTGTGTTCGTGGCTTTCGTGCACAATGGCTCCCCGG
CGGCGCTGGCAGGCCTTCGCTTTGGTGATCAGATCCTGCAGATTAACGAG
GAGGTGGTCGCTGGCTGGGACATGGAGAAGACCATGAAGTACCTGAAGAA
GTGCCCACCTGACAGGATCATCTTCGCTGTCAGGGACAGGTGAGTTCTCC
ACACAGTATACATGTAGCTGTGGGGGCAAGGTGGTCTTGTGGTTAGGCTT
GTTGACTTAGAATCTCAGGCAGGCCCTGGAAGCATTGATAAGAATCCTGA
CTATAGTGACCACCTGTCAACATGAACCAGATTTTATCTGTTGCTTGCAT
GGTCTTCTTGGGCAGTTTTGCTTGTAGTCAAAATTAGAAGTAAAGCTAGT
ACGTAGTATAATAATTATTATACTTTTCATCATCATCTCATCTGGTTCTG
ACTGTCTCACGGATGGTCATGGCCCTTCCCCTCCATCCCTCCCTTACTTT
TCATAACTGATCACAAATCATTTATTCATTCAAAGATACAATTTTAATGA
TAGTTGTGGTTGTATTTATTCAGGCCATTTGAGAGGACCATCACCATGCA
GAAGGACAGCTCCAACCACATCGGCTTTGTCTTCAAGAACGGCAAGATCA
CGGCCATCGCGAAGGACACGTCTGCCGCTCGGAACGGCGTTCTGATCGAG
CACCACCTCATCGAGGTCAACGGACAGAATGTTGTCGGACTGAAGGTACA
GCTAGTTTAGATTTGTTGTTCATTACTTTTATAATGTCTTCATGTTTCCT
TGTTATACAATCTTTATAATTGTAGATGATATCTAAACACTATGTCATTG
TCATTGTCATAAATTTCACCTCTCATCTAGATTTACGTACTAAAAAAGTG
ATGGTTGTAACTTATGATGCAATATGCCCTAACATGTTAATGCATGCAAA
TATAATGTATAGTTAAAGGAATTACCAGAGTGCACTTTTTCCTAAGACTG
CTAGGTGGCGTTGTTGTCAGATGGACATGTAGCAAAGTCTTCTGTTGTGT
GTCTGAAACATGGTGCTTGCACTGTAGTTATGATAATGAAAAAGGGGACA
GGATAGTTTATCTTTGTTTATGTGGTATGAAAGACGTGTTTCTTTATGTG
TTAAATGGATTAAGACATTGTTAACATTTTGTTTTCTTGTCCTCACAGGA
TAAGGAGATTGCTGAGATCATCGCAGCAGGGGGACAGAGTGTTACCATCA
CCATCATGCCCACCTATGTGTACAACCACATTGTCAAGAAGTAAGTCCAC
TTGATATGCACAAGTTACAGTTGTCATGCCTTTTCAAAATTATGATATAT
ACTTTTTGAAATTTGTTTATTCTTGCGAGGACTTATAGTTTTATTAGTAA
AACTGGAAACATAAAAATCATACTGTAAGTTATTCTAAACAAAAAAAAAC
ACTGCAAACATGTTAAAGATTTACAGCATAAGCCTTTTTAAAAATGGATG
AAATTTCCGAAAGCTAAGTTGTAGACTTGCATTGTAAACCTGGGCATGAT
TGTTTTTTTTCCTGCCATGTATCTTTCTTTGAGTGATCATATTTTTAGTA
TTTATCACATATAGTATTAATCTGATGAAAAAATGTTATGTTCACAGCAT
GGCAGACAGCCTGGTCAAGAAGATGATGGATCACTCCATTCCAGATCTGT
AAGCCGCCCCTCCCAGGACTCTAACATCAGGCAAACATTCATAGTACAGG
GTTCTCTATAGAACTACTGCCTACATTTTGTACATTTCTCATGTAAAGGA
GGCACCATATTGTCCAAGCATTAATGAAAACTGAAGATATATAAGGGCTG
TAATCTTGTATAGTTAAAAACTGTGGCTTATGGACAAGACTTAGTGACAT
ACGTGATGGTACCGTATGCAGGACTTGTATTCTTATATTCATCCTCTGGA
GATAATACTACCTTTTGTGTGTACCGTTTGCCTCAAAAGTATATTGGAGC
TATTCTTAGTAGATTTTGAGCTGCAATTTGGGATGAAAGTACCAGTGGAT
TAATAAGGCATGACACACAGTCATTCAAAATTGTAAGATAAAAGTTTAAC
TTACTACCTAGATTTTATTGTGTTTTGCCGAACAAGGGTGAAAATTTTGG
ATCTTGTTAGTTTATGTTTAAAACATGATAGCAAAGCCTCCAAAAGACAC
ATGCCTTCTTTTAATATATAGCATGTAGTATCATGAATTTCCTATTAGTG
AGTGAAAAGAGCTGGATGTGGGTATCATTCATTCCAATAATGGTTTTATT
GTCAGCATGTCCTAGATAGAGTAATATTGCAACCAAGAATTAAGGCCTTG
ATATAAAAGTGAGATTCCAGCATTAGAGGATGTATGATTTTATAATCTGT
AACGTTATACTCTATACTATATAGGAAAGACTAAAAGGTACTTGTCATTA
TTGGCTTAAAGCTGTTCTCAAACAAAAAATGTTTCTAAACAACTAACATA
TTAAGAGAATTTTAATGAATTATTGTTAATTGTCTGTGACAAGTTTGATG
TGTTTTTATACTTAATTTTCTTGATTTCTAAAGAAAAAACAATGCAACTA
ATAGATGTGTCTTGACCAAAGTTTATACTGAATCGCAACATTGAGGAAAA
GTAAGTCTGTCTTTCATCATGTTAAGTGCTACAAAGTTTTCTTCTACATT
CAATTTTGTTAGCAATCTTCTACAATTTTTGATTTTTACAATGTTTAGAA
AAGTTATATTGGACCTCTATTTTGACATTAGGATTTACTTGACAAGCAGC
ATTTAGACCAGCATCTGTAAAGAGACTGTATATCTGATATTACTTTTGAA
TCCCTACAAATGTCAAATAAAGTTGAAAGTGCTCTTCACTGCAGTTACTG
ACAATGGATGTTTTCTTTTATGACTAGATTTTTGCTGAAAGGTATAATTG
TGACTTGCTGGTTTTCTGAGGTATTTATTTTACAGAAAGTGCAAAACTGT
ACATTTTGTAATAGTAACAATGGCTAATATAACACACTCTTACAAATTTA
GGATGTTAACATTAAGTGATACTGGGTAACAGATTTTCTCCATGTTTTTT
TTTTCATTTGCTCACAGAAATATTACTAATTAATATGTTGATGGACAGCT
AGTTATTCAACACAAAATTCATAGGACAAGTGTTGTTTTTGCATACTTTT
TTAAAGTTTCACACAATCATGCTCATCTCTGCATAAGTTTGGAAGAAAAC
ACAACTCCAGGTTCAGTTTCAATATTTATTATGCCATGAATATTTGTATC
TCACAACATTGAACAATATTTCAAAAATAAAAGATAAACTTACTCTTGCA
TTATAAGTACTGACTCGGATTGTCAAAGCATCCTTCACTGGTAATCAAGC
AAGAGGTAAAGTGACCAATCATTAAAAAAATTTTTTAAAAACTGACCAAG
ACTCAAGGGGACCAACAAAATCTGGTCACTATAGGATTGTCGATGGGAAA
AATGATTTAAGGCCCGGTTTACCCATGCGTAATTGAGTCGTCTCAGGACT
GTGCAAGGAGAACCCTAGGCCACTCTAGTAGTGTTTTCTAGTAAGCAAAC
TCCATTTGAGCAGCCAAAAGCTCCTCACACACAACCCTGAGTCGATTGAA
AATGTGTGTGTAAAAGCAGGCCTCAGGGACCACCACTGGACAGGTGGTAT
TTATGTTGAGGTGGTCACAGATTTGATTGTGCTTGAATAAAGC Coding sequence (CDS) from alignment at Sc0000158:411131..418473- >Blg01218.2 ID=Blg01218.2|Name=Blg01218.2|organism=Branchiostoma lanceolatum|type=CDS|length=948bp|location=Sequence derived from alignment at Sc0000158:411131..418473- (Branchiostoma lanceolatum)
ATGTCGCTGTACCCATCACTGGAAGATATGAAGGTGGACCAGATGGCCAA
GGCACAGGTGTGCCAGGCAGGTCAACAGGCTGCTGCTATTCAGGCACCTC
CACAGTACCCTACCCAGGCACCGGCCTACCCTACACAGCCTCCAGCCTAC
CCTACAGCACCACAGCCAGCTGGAGCCATGCCAGTTGCTCAATTCAGCCT
ATACCCATCCCTGGATGACTACATGGGACTGAGTCTGACCCCAGACGAGG
TGAGAGCCAACATGCCACAGGTCCTGGAGCCACCACCATCGCAGGCCGTC
GTAGCTCGTCCCCAGGGGACCGTGGTGACTGCGCCCATCACCGGGAACAG
CGTGGGTCTCCAGCGCGCTGAGATCAAACAGGGAGTGAGACAGCTGATGT
GCTGTAAGGACGCTAGCGGCAAGATCGGCCTCCGAGTCAGGCATGTCAAT
AAGGGTGTGTTCGTGGCTTTCGTGCACAATGGCTCCCCGGCGGCGCTGGC
AGGCCTTCGCTTTGGTGATCAGATCCTGCAGATTAACGAGGAGGTGGTCG
CTGGCTGGGACATGGAGAAGACCATGAAGTACCTGAAGAAGTGCCCACCT
GACAGGATCATCTTCGCTGTCAGGGACAGGCCATTTGAGAGGACCATCAC
CATGCAGAAGGACAGCTCCAACCACATCGGCTTTGTCTTCAAGAACGGCA
AGATCACGGCCATCGCGAAGGACACGTCTGCCGCTCGGAACGGCGTTCTG
ATCGAGCACCACCTCATCGAGGTCAACGGACAGAATGTTGTCGGACTGAA
GGATAAGGAGATTGCTGAGATCATCGCAGCAGGGGGACAGAGTGTTACCA
TCACCATCATGCCCACCTATGTGTACAACCACATTGTCAAGAACATGGCA
GACAGCCTGGTCAAGAAGATGATGGATCACTCCATTCCAGATCTGTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg01218.2-exon-Sc0000158-1570713199:418144..418473 | Blg01218.2-exon-Sc0000158-1570713199:418144..418473 | Branchiostoma lanceolatum | exon |
| Blg01218.2-exon-Sc0000158-1570713199:417358..417434 | Blg01218.2-exon-Sc0000158-1570713199:417358..417434 | Branchiostoma lanceolatum | exon |
| Blg01218.2-exon-Sc0000158-1570713199:416656..416797 | Blg01218.2-exon-Sc0000158-1570713199:416656..416797 | Branchiostoma lanceolatum | exon |
| Blg01218.2-exon-Sc0000158-1570713199:416091..416188 | Blg01218.2-exon-Sc0000158-1570713199:416091..416188 | Branchiostoma lanceolatum | exon |
| Blg01218.2-exon-Sc0000158-1570713199:415269..415430 | Blg01218.2-exon-Sc0000158-1570713199:415269..415430 | Branchiostoma lanceolatum | exon |
| Blg01218.2-exon-Sc0000158-1570713199:414685..414860 | Blg01218.2-exon-Sc0000158-1570713199:414685..414860 | Branchiostoma lanceolatum | exon |
| Blg01218.2-exon-Sc0000158-1570713199:414129..414300 | Blg01218.2-exon-Sc0000158-1570713199:414129..414300 | Branchiostoma lanceolatum | exon |
| Blg01218.2-exon-Sc0000158-1570713199:413584..413675 | Blg01218.2-exon-Sc0000158-1570713199:413584..413675 | Branchiostoma lanceolatum | exon |
| Blg01218.2-exon-Sc0000158-1570713199:411131..413226 | Blg01218.2-exon-Sc0000158-1570713199:411131..413226 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000158 | genome | Sc0000158:411131..418473 - |
Properties
| Property Name | Value |
|---|
| GeneID | Blg01218 |
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