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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000158:494348..501242+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg01213.3 ID=Blg01213.3|Name=Blg01213.3|organism=Branchiostoma lanceolatum|type=mRNA|length=6895bp|location=Sequence derived from alignment at Sc0000158:494348..501242+ (Branchiostoma lanceolatum)
CTGGTCCGTTTAAACCCAAATCCAGTTGGTATAGCGCACGATTTGTTTTA
TGTCCTACAGCCTCTGCTCTCCCCTGGATGTAAGTGTTGCCAATGATGTG
GCAAACTTCTGGAGTACAATATCTGGAAACTTCATGGGTGTGGTACAGTA
CAACAAGGATAACAGGGAGTTTGAGGTAACATACTTTATCTTCTGAAGTC
ATTATGATTCTATAGGATTTTTAAAAAGAAAAATTCCTTATTTTTGAATA
AACATGAAAAAGGAACAAGGCTGTGACCATATTTAGCAAGCTCTGACTTA
AGTAATAGAAATATAGTTTCAAAACTATTTCTCAGAATGATACCTTTGTT
GCCCATCAATATAGCACTTCTCTAGGATCATAAGAACTGAGGAGTGTAAC
ACTCCTAGTAGACCTTCCATGTAGAGTTTCTTGTAATAGTTCATCCCAGA
GGTTACAGCTAAAGCTCCTAAGCAATAATCTAAATCATGGCTGTATTTCC
TGCTGTGTTCTCAGGGTGCTGTGGGCACAAACATCACCCTGGATGTCCTG
TGTAACATCATGAATGACGTCTCCATGCCACTGGTGGACAGATATGCAGC
TGTCAACAGCCTGATGATGAAGACATACCAGCAGAAATGTCTTGATATCT
CCTACTCTGCAATGGTTAAGGAGCTCCGCGAGACGTCTTGGGAAAGTGCA
GCGTCAGAAGGAGGTTGATACTAGTTCAATATTTATCAGTTTAGTACAAT
TTGATATATTAGAATACAACACAGCCTAACTAGTACTGTGCCTTGCAGGA
AAGAGCTGCAACTGAGGGTGATGCAGAATACATGACTTGTTTATATTGAA
TTTCTTTTATGTTGCCTGAGATATAATTATAACGCATGTTTCAATATGAA
ACATGCCAGAAGTTGTGAAAATTTGGTGTCCATGGAAGCCAGTGCAATGT
GATTAAGTCTGTGAGATGCCCTATACTATAGCTAGTTCATGTGATATCAG
GGCTGGGATAACGTTTGTTACAGTGTTCTGGATCGGTTTATATTTTACCG
TATTGCGCCTTGACTTTGAAGTTGTAATACACAGGCTTCCATCAAAAGAT
TCAAATGCAGTTTGCATGTGTGACATAAATGTTGTTATGTGACAGTCAAA
TATTTGACATATGTACACCTTCAGCTTGTGGTATACTTTTAATCTTGTAA
TATCATGATGAACAGCACTTGACGTGTGTGCTAATTTCTATATCTAGTAG
AAAACTTGTGCTTAATTCCTTGTGTTCTAGGTCGCCAGTGGATCTATCAA
ACGTGTACAGAGTTTGGTTTTTACCAGACGTCAGACTCTCCAAACCAGCC
CTTTGGGGACGGATTCCCACTCAGGTTAGTTTGGGTGTGCAATTTTTGAA
TCAATGAATTAATAGCCTTACAGTACCGTGATTTACTGTAATTAAATTCA
CTATGAATAAATTTTACGGTAGGAAGAAAATGGAGTGTTTTCGGTGGTTT
TTAGTTTTGTGGGTAAAACAAGGCACTATAATAGTAGAAGGCGGGCAGAA
AACGAGCAGCTTTCCTACAGTGGTTTTAAGTTTGCTGCTGAGTGAAGAGG
TCAACGTGACCCCCATGAACATCAAACCACCAAAATTTAAATGCGTTTAC
AGTACAGCGTCCTTGAAATTGAATGACTCACCCAGGTCTGCAACTACTAG
GGCCTTGATCATTTGATTACATGAACTCCTGATCCAAAATATTGCTTTCA
AAACTCCTACGGTATCCCAGGAGCCAAGGTTTATCGACAGGAACAACAAT
GACTCATGTCTCATTTCCCAAGTGTGCAGTTATCATGGCTGTTGTTTGTG
CACTTAACTCCAACAAAGTACCTCCCTAATGGATACGTGTCACATAGAGA
TACAGAGAGCAAGCTTTGATGTCAAGCGTGTCACTCTGTGTTTATCTGAA
GGTCCAGTGTCAAGGTTATTGTATTGTTTTATTACCTTCAGCCTGCTAAT
GTTACGGTAACATTTCTGTATCGGGAAAAATAAGAATGTATACAAACAGA
TATACACAGATTATGCTCATGGATAATCTTTTCATGCTATTTGTGTTTTG
TTGTCTTTTTTTCATATTTTTCGTTGCCACAAAATGCCCGGCCGGGCCTC
GGCTTGGAAATGTGAACATACATTTAGCATTAGGTAGCCTGTAATGGCAC
CAAATGTTTATAGGAGGAAGGTTAAGAGCTTTAGGATTTAGAGAGAAACA
GTTGTCATTTTGCATTATCATCAATTTGTTTTTGCTGCGTAAATCTGTAA
CCATTAATGCGGTGTCAGCAGGGAGTACCGGTAATTGGGACTTAATTTGC
ATAGCTAATGCGGAAAATCTATATTTGCAGTGTTTTCCATTATCAGACTC
GTATACATGTAACATATGTAGTTATTGAAAGTGGATCATCAACAGATACC
AATTATGCAAATAAATTCCTAATTTGCATAATTAATGCAAAACACCATAT
CTCATCTAATTGGAAAATTATAGCGCTGTCAATATGATACTAAGTATGCA
GGTAGCTTAGACAGAGATATACATAATAAAGCGAAAATTATGCTAATTGT
GACTTAATTTCCATAGCTAATGAGGAAAAATCTATATTTGCATTTTTTTT
TCATTCCCGCTTAGGCAGGACGTTGTATGCTATGAGGGTATTCACGCCTT
TTATTGTGAAGCTGTACTTCATGTTACACGTTGTCAGTAGATAATTCGTA
ATCTAAAAGCACTATGAGGGTCTGCATGAAAGGGACCTGGTATTATGCTT
AATGGTAAATTCAGAGAGCCGGCAATGCTTATGATTATGACAGTAAATTG
ATGGGCATTCCTATACGCACTAGCTGTAAACAGTTATAGATTTGGGTATC
TCAATTTGTAAAATCTGGCTGCAAACAGGCCACACAACAGGTTGTTCAAT
TGTGACTTTTGGGCACTCTAGGAGTTGATTATGCGATGTGAAGAATTTGT
CAATAATGCTAAGCGATGAATTCTGAATAGCAAATAACGTGCTATGTATA
ATTAAAGCAAGCAATAACACATCACAAAATATGACTTATAGATACTGCTT
AATGTTAAATGAAACCCTCCCTTTTCCTCCTACCATAAAATTAAACCACT
GTGAAAGTAAAATTGATACACTGTATATATTAACAGACTACAGTATCCCT
AAAGATACTGCCTCCTGGCAGGTCCAGTGGGTATTGCAACAAACATATGT
CCTGTCACAGACAAGGTCCCATCCCATTGATTCTGATGCTGCCCGTGCTT
TTTCCTAAATGGGTCTTTAATGTTTCTCTTCTTCACACTTAATGCACAGG
TGCTTTGGCTATATTGATACCATTTCTCAATAATATCAATTTGCACAATT
CCCTTTTTTTGAAGTATCAATAGAATAATAAAACTGGAAGTTAGCATTTG
GTTGACATTAGCTTGAGACTGCTGTGAATGCTTTGGAAACTGAATTTAAA
TATCCCTAAGGCGGGACATCAATGCTATTAAATAGACGCAGATGGAATCT
TTATTGGGTCAAAGTGGGAGATCCGTACATCTTTAAGACCTATCCCCAGT
GGAGACCATTATGGAACGGAAGGAACAACATCTGATGGCAATCTTGATTA
CAGTCAAAACTGCCCAAGAAGACCACTCAGGGGACCAATATAATCTGGTC
TATACAAGTTACCTGGTCACTATATAGACAGGCTGGTTAAATGCTTGTGT
CAATGGGAAAAATTATCCAAGAGACCACCAAAAACTCACAGGTCACATAG
GCCAGGATAGGTGCCACGGGTCCGTATGAAGAGGTTTTCATTTGTACAGG
TTTGACTGTACTACATGGCTAAGTATACATATAGCACATCTCTTCTTCGT
CATTAAGGAACGGAAGGAACAACATCTGAGTTTTATGTAACTAGAAGAGT
CGACCTAAAAAAAAGTTCTTCATTTCTGGACATTTTGGCAATGTGTTCTC
TTCAAACAAAGTTATGAAAGGATTTTACAAAGTGTATCAAAGCACATGTG
TCTGTCCACATACATTATATAGGTTTCATACTACATCTCTACAAAATGTA
ATTAATTATCATTATTCTCTTCACAGTTTTTCAATACAGCAATGTTCGGA
CATCTATGGGCCTCAGTTCAACCAGTCTACGCTCATGGAAGGCATAAAGA
GAACAAACACAAACTATGGAGCTCTGAAAATTGCAGGAACAAAGATCGTC
TTCCCCAATGGGTCGATTGATCCGTGGCACGCTCTGGGAATAACCAAAGA
TCCCGAAGGCACAGACCTTCATGCAGTCTACATAAAAGGTAAATGGCAAG
AACTTAAAAAAAGAAAAGGAAACTGTGTTTTTTTCATATTTTTTAGAGGA
ACCAACTGCTGAGTGACTGTTGAGCGACCCACGGGTCCATTTGATTTTTT
TCATGAACAAAAACAAATTTTTGTAAGTTTTGTGTTTTTTTGACAGCATG
CCTCATAACCAGATTAATGAAGGGTCAGACAAGTCCAATTTTGGACACTC
AGGAATCGCTGTCTGGTGGAAAGAGGGCCTCAGTTGTTTCAATGTTATGT
TTTCCTTTTCCATTGTAAGATATATTGTATGCACTATGTACATCTAGAAT
ACAACACGGTGTATTCCATATTGCCTGAGGTACCAGCCTGACCCTGGGTT
GGATGGGCCAGTAGGGTGATCTGACCTGCGGTAGGGCTGGGACCGTGAAT
TTTATGTGAGTTTTATTTATGTCATATCCCCCCCCCCCCAAAAAAAAACA
TTACAATGTGAAAATTGTGACAAAAGTGGAAAGTATTTGTGTCCTCCTCA
CTGCTAACGTCCAAATGCAGTATTCAAATTTTTGACAGTGGCGTAACTGG
TGCACGCAAAGCGCGCTCAGATCATTCGATGGAAGCCTACGCAATTTGAC
CTTGAGGCCCTGGCAGTACGTTGAAATATAGACCAGTCTGGAACACCCCT
ATATTACCCATATCGATAGTAAAAGACATACAAAAGACTATCCACTGTTA
TGTCTTTCTTTTTTTAACTTATCACTTATACTAAATGACTTTTTTTTCAA
ATTCCAACAGGAACTGCCCACTGTGCCAACATGTATCCAGCCAGGTTCGG
GGACCCTCCTGAGCTGGCACAAGCAAGGGAAACCATTAAAGGTCACATCC
AAAACTGGCTGAGCCAGTAAACAAAGGCATAATAGCTGAAGGTATTAAGC
CCCTATCACACATTCAGGACCTTCTTCTATCCTTAACCCATAACCACTAC
ACAACCGAGATCAGCCGTGAGTTGGGAGCAGTCTGACCAATTCTGTCTTT
TACGAATGTCCTTATATACATATATATAGCTCAACTGGTAGCTCAGCCTC
ACAGTCGAGCTTCTGGTTTCAGGTACTACAAGGGTCTGAACGATTGAACA
AATAAAGGAACCATCTTTTGCGATGACCATGCTACAATTATTTCACAACC
ATGCAGTGACCTGCCCCCAAGCAAGCCCCAGTGCTTTCATACCTTCTCCC
AAGCTCACGATTTCTGATTGCGAACTCCCTCCTGGCTGATTCCTAACTGA
TTGCCAACCCTCTCACAAATTGGAATGGGCATTGATTTTTTTTTTTAAGG
TGTGTCCATTTCATTGTTTATCAATAAGATCCACACATCGATGTTGTAAA
CATGACCAAGAGATCAGATTGGGGTCAGAATTAGCTCCAACACAAATTTG
ACTCCCAACCACAACACGACCACTGCTTACTCCCAAGCAGTTTCCAACCA
GCTCCCAGCCCAATCCAGACCTGTCAAGTCTCAACCACTTCCCAATGTTT
TAAACATTTTGAAACATTCTGCTGGCACAGCCAACCAACCAGTAGCCAAC
CTTGCAGGCCAACTGCCAATTACAGCCGACCTTGCTCCCAATCTGGGGAA
GGTTAGAAATCTTTGGGAGGCCATGGTTGGCTATGTGTGACGGGCTTAAA
AGTTCAAGCTGGCTGTGCCTTGTAATTTCTGATACCTGTTATAGGGCTTT
TAAAAAGCATGGTCATAGACCAAAATGAATTAAGTTGAGTTAGATAAGCA
CTCTAAAATAAACAACAGAAAAGAAATTAGAAATACATGTACATGCTTTA
TGACATGGATCTTTAGATAAAAGAAATATAAGAAATGGGGTGACAACCCT
TGCCACTAAAGGCTGCTGAGTGAATGAAGATTTGACAGATCTAGATCGCT
CAATGAATTTCATAGACGAAGAACTTTTTTTTTTGCTTTCCATGTTTTGT
TGTCTTTCAACTCATATATTTACATCCTGCATCATATTCCAAATATAAAA
TCAAAGGTCACATCCAATTTTGTCGCTGTCTGGTTGCTTAGCGTTCATTA
TCTAGTGGAAAGAGGGTCTTATGTTTTCCATAGCAGAGAATTGGACCATA
TCAGAGGTAACTTCAGTTATTCTTGTAGCACTGCTTACATACTTTTAGAC
TGAAATGGTTTGGCTCTGAATATCTTCAAGAAATTGAAACAAAAGAGATA
TTGTATATTCTACTCAGATTATTTTATTTGGATGTACATGTTTCACTGCT
TCCCATGTGCACTTCCACCAAGATTGGTGAAATAGCTGTACAATAATTAT
CTGACATATTTTGCCTGTGATATTCATAATTATATACGTAGGTAAGATTT
TATGATAAAGAATATGCAGTTCAAACTGTGTGTCCTTGAAATTCTTGGCT
TACATACTGACTTGTACATGTACATCAGGGCTCCAATTATTCATCTTTGG
CAATAGGTGCACAGGTGCACTGAACCTGAAAATTTAGATTCGCAGAAAAC
ACTTTGGGCCCTGTCACACTTGTGCGTATATGCAAGTCCGCATGA Coding sequence (CDS) from alignment at Sc0000158:494348..501242+ >Blg01213.3 ID=Blg01213.3|Name=Blg01213.3|organism=Branchiostoma lanceolatum|type=CDS|length=741bp|location=Sequence derived from alignment at Sc0000158:494348..501242+ (Branchiostoma lanceolatum)
ATGTCCTACAGCCTCTGCTCTCCCCTGGATGTAAGTGTTGCCAATGATGT
GGCAAACTTCTGGAGTACAATATCTGGAAACTTCATGGGTGTGGTACAGT
ACAACAAGGATAACAGGGAGTTTGAGGGTGCTGTGGGCACAAACATCACC
CTGGATGTCCTGTGTAACATCATGAATGACGTCTCCATGCCACTGGTGGA
CAGATATGCAGCTGTCAACAGCCTGATGATGAAGACATACCAGCAGAAAT
GTCTTGATATCTCCTACTCTGCAATGGTTAAGGAGCTCCGCGAGACGTCT
TGGGAAAGTGCAGCGTCAGAAGGAGGTCGCCAGTGGATCTATCAAACGTG
TACAGAGTTTGGTTTTTACCAGACGTCAGACTCTCCAAACCAGCCCTTTG
GGGACGGATTCCCACTCAGTTTTTCAATACAGCAATGTTCGGACATCTAT
GGGCCTCAGTTCAACCAGTCTACGCTCATGGAAGGCATAAAGAGAACAAA
CACAAACTATGGAGCTCTGAAAATTGCAGGAACAAAGATCGTCTTCCCCA
ATGGGTCGATTGATCCGTGGCACGCTCTGGGAATAACCAAAGATCCCGAA
GGCACAGACCTTCATGCAGTCTACATAAAAGGAACTGCCCACTGTGCCAA
CATGTATCCAGCCAGGTTCGGGGACCCTCCTGAGCTGGCACAAGCAAGGG
AAACCATTAAAGGTCACATCCAAAACTGGCTGAGCCAGTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg01213.3-exon-Sc0000158-1570713199:494348..494522 | Blg01213.3-exon-Sc0000158-1570713199:494348..494522 | Branchiostoma lanceolatum | exon |
| Blg01213.3-exon-Sc0000158-1570713199:494862..495060 | Blg01213.3-exon-Sc0000158-1570713199:494862..495060 | Branchiostoma lanceolatum | exon |
| Blg01213.3-exon-Sc0000158-1570713199:495628..495721 | Blg01213.3-exon-Sc0000158-1570713199:495628..495721 | Branchiostoma lanceolatum | exon |
| Blg01213.3-exon-Sc0000158-1570713199:498474..498685 | Blg01213.3-exon-Sc0000158-1570713199:498474..498685 | Branchiostoma lanceolatum | exon |
| Blg01213.3-exon-Sc0000158-1570713199:499458..501242 | Blg01213.3-exon-Sc0000158-1570713199:499458..501242 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000158 | genome | Sc0000158:494348..501242 + |
Properties
| Property Name | Value |
|---|
| GeneID | Blg01213 |
|
