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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000158:343753..350973- Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >Blg01205.1 ID=Blg01205.1|Name=Blg01205.1|organism=Branchiostoma lanceolatum|type=mRNA|length=7221bp|location=Sequence derived from alignment at Sc0000158:343753..350973- (Branchiostoma lanceolatum)
GTTGAGAATTTTCGCTTTTATTCTATGAACTGAGACTTCTACTTCTGATA
AAAGTGTGTTTTATTCCACTCAAGGGAAAGGCCGACTGGAAAACTGATGA
GCATTTCGGTGCTCAGCGTCTCAATGGAGTCAACCCCACATCGATTCGCT
TGTGCACGGAGATACCGAAAGAGTGAGTACTGAGTAGTCCCTCATAACAA
CTCAAAAACAGGGAAGATAAGTATCGTAAATTTACAGAATAATTCAGCTC
AGTGGATAAGACCTATTTGAGGAATAAATAAAACATGGACAAGTGGTAAT
CTAAAAGAGCACTCAAGAGCAGACGCAGTAGGTGTTATTTTCTAAAACCT
ATCTACCTTAATATAAGTGTTGGTTCCTATTCAGGATAGATGCTGGAGAT
CCAGGTCAACGTTTGGCCCGAAGCAATAGAAGAATTAAGTTGCCAAGACT
GAAAAATGATGAACAACTATTACAACTATTCTCACATTACCAGTACGTGA
CATTTGCCTCAACCTCCACAGTTTTGGAGTGACATCATCGATGGTCGAGC
CTTCTCTGCAAGGACTAACTCTGGATGCAGCGATGCAAAAGAAGCGTCTA
TACATCGTGGATCACACCAACATGGAGATAGCGTCCTTTGCGAACGGCAA
ACCCGTAAGTACAGTTCTCAAAGAAGAAGGAATTTTCATCTGTGTTGGTA
CGATAAGCATCAAAAGCTAGCTCGGACTTTATGAGGAGTTTGACATCCTT
CAGCCTTATTTGCTTGTTTTATCTTATTGTGACGCGTATTCACATTCCAT
AGATGTGCGCTCCATATGGACTGTTCTTTGTTAACAACAGCGGGGACCTG
GTTCCTGTCGCTATCCAGTTGTATCCTAACGTCACAGAGCAGCATCCGGT
GAGGTTTTCTTTTTGTTGGCAAACAGACTCCTATTGTCTATGGATGAATG
TTAGACATCTTTCAAGAAAGAGGCTTGATACCTTTAGTAGTTCGACAGCA
AAATAAATAAATTGATGCTTTAGTGATTTTATACTCTGTTTATATTTAAA
CAAAGAACTCAGTTGAAGCTTCTGTTTTCAATATAAGGATGCATGTGAAG
CGACTTTGCCATATGCACATGCGCTATTCATTTCGATATACATACATTGT
ACCATATTCTGACATATGCACTCTGAATGTTAATGTTAAAGAATCATAAA
TCTCATTGTGAAACTACAGGTATTCCTGCCAGGCGACCCACCTTACACTT
GGATGCTGGCAAAGATGTGGTTCAACTGTGCAGATGGGAACTATCATGAG
GCCGTGGCTCATCTTGGTGAGATATAGTAATCTTACATGTCACGGTCTAC
TTTTGCCATATGCCATAACAAGCAACGTGGAACATTGCAGATCTATTCTT
TTGACTTTGTAAAAAAATGAAACAGTACTGACACGCATGCTGATAAGACA
TTTGTGTGTTTCCATTGCTTGCAAAAAAATATTAAACTGAGATTAATTGT
AACATTACTGTTCGTGCTTTTTACAGGATTTACCCATCTATTGGTTGAGG
CAGTTGCACTTTCAGCCTATCAGAACCTTGCTCCGACCCACCCGATCCTC
CGCCTGATGGAGCCACACTTCATTTACCTTTTTGCTATCAATCAGTGAGA
TCATTAGTCTATTCTATATATACATGCAGTCCATATATCATCACTTTGTT
TGAATTCAATTGTCACTAAACATGTAACTTGTAGTTTCAATGTTACGAAT
TACATCAATAGGTGTGGACTAAAAAAGTATCTACTATGTCTATAGATTAT
AGTAAGAAAGAGAACACTCGATAAACTAACCCAATAGAAGAAGCAGGAGT
TACGAAGTCTTCTCGGGGACAAGTTACTAGTATGCTACGTTTAGATCGGA
ATGGACATATCAGCTTTGCTGGCACGCGGCGGTGATTACCATTACTAAGC
GGCATCATCAAGATATACAATAAAGGTCAAAATAATCTATGTAATAGGTC
TAGGAAGCTGTATGTACATAGCAGACACTAAAATCTTAATGAAGACTGCA
AACGGTTCATAAGATGGTGGAAGGATTGGACAGTATGACACCGCTTAACA
ATTATTTCAATCCATTGCAAAACATATCAGCGTTGAGCATTTTCTTTCTT
CCTTCAGGCTGGCTCTGGAGGCATTGATCAACAAAGGTGGTGGCCTGGAT
CTTGTCACACAGATTGGCACGGTTGGCTCCTTTGAGCTTATCAGAGAAAA
GTGAGTGATGAATCTATGACAATGTATGTATGTATGTATGTGTTCGTATC
TATGACCTATTTTTAATGAAGATTAATGAATTGTGACCTTTCCAAAGGTG
GCTGTGTTTTGGGTAGCTTTTTTTTTTGGGTGTTTATGGTTTAAGTCAGC
ATAGCTCAAGAAGATATTGATGGACTGCCATGACATTTTGTATACTGTTT
AGTTGTTGACAAAGCAAATTGAAAGGGCAAGATCAATCAATTATGGGCCT
TCTTGCGACTTCTTTTGGTACTGTAGCAGAACGGCTGGTATCGGTATCTC
ATATTCTGCACTTGCTATGGTCATAATATCTATATTTATGCTTCACAGCT
GCTGTCATTTAACTATTGAAATTATCAGTGCAAATGACATGCATTTACAT
GTAAAATATTCTAACTATGCAACAGAAAATCATATCATAGAAAATGCAAT
GATGCCTTCTCAAAGGGGTAAAGGGTTTGGCTTACTTTATTTAGTAGCTG
CTACCCAGTAGCTTCAAATAATACATTTTATTGTCATAATCATGGTTCGA
TTTTACAAAATCATCATCAGGCTGAAGACATGGCGACTCGATGTTGACGG
AACACTTCCCGAAGATTTAAAGAATCGAGGGGTGAGCTCATGAGAACTTT
CCATCCTTTATGTATTTAACGGTTATTTACCAAATCTTTGTTTGAATAGA
AAATACGTGTAGTCACGAAGACTAGTTATTTTCATCATCTATCATGAACA
AGAAAAAAACTACAATGATTATCATTTAATGATGAAGATTCTGCCAATGA
ATATGCTTGTACACACGTTCAGGTGGACGACGAGAAAGCTTTGCCCAAGT
ACTACTACCGTGACGATGCTCTGCGTTCGTATCACGTGATCCACAAATAC
GTCACCAGCGTCGTCAATATCTTCTACGATGATGACAGTAAGTACGTGTA
GTGTTTTTAGATCACTAATCACAGTGAATTAAAAGTATTCCCATTGCTTT
GTGGGTAAGCTATATTATAATTGTAAAACTCACTACAACAAAATCCGTTT
ACAATGATGTAATGTGCTCCCGGGGATTCACTGAAAAAAGTGACATTTTC
AAGTGAGCCTCCAGGGNAAGTGACATTTTCAAGTGAGCCTCTAAGGCTAA
ACAAATAATAAAACAAAACTTAACGAATAGTAACTGAAAATAAGATATTT
GAAATGTATTTCATTTTTCTTTTAGATGATTCTGTGAAGTTGAGGGACGA
CAAGGAGATCCAGGCTTGGGCAAGGGCGCTCGCTTCTTCATCACATGGAA
ATGTGGCCATTAAGGTGATTTAGCGATATCGTTAGTCGTAGCTGTATTAT
CAGAATTTCAAAAGCTAAAGTTTTAGAGAGAGACCAATTGATGAATGAAA
AGCTTCATTCATCCACATGCAATGTTTTACGTAGGGCATAGGTACTGTAT
TGTCTTGAAGACTATGTCAAGACATCCTAAATTGTCCTAATCTCATTAAC
ATATCTATTCAGAGTCTTGGTATGGAACCTGGTCCTCCAGTCCTTTCCTT
AGTCACTGACGAAAGATAGCGGATGCTGTCTGAAACGTCTGACTGTTTCA
AAATTTGATCCAGTTGTTTGGGTAACTATTTTTGGTTATTGTATTTTTCT
GGGTCTTTAAAAACAATCCTTTCTTGATACTAACACTTTCATCTGGCTCA
CCTACAGGGAGTTCCCGGGAATGGAAGTTTCTCCACGCTTGATCATCTGA
TCCAGACGGTCACCTCCATCATCTTCACCAGTAGCGTGCAGCACGCAGCC
GTCAACTTTATGCAGTGGGACCAGTACGGCTTCGTCCCCAACATGCCGAT
ATCGTTGGAAGGGGAACCACCGAGAAATAAGGTAATGATATCATCATCGG
CGGCATCGTGATCGCCGCATATCAGGAACAACATATACTGAGGCGAGCTG
TCCTTGTTGTCCATTGTCTCTTGTCTGTTGCTAACCGTTGTGCCCCCTCC
CATCCACCACATATCTCTGTAACTAATGACGCTCTGCTGCTCTCCTCCAG
GTTATTTCTTGGTCGCCTCTTTTTTTTCCTGCTAAGTTCCAGTTTAAAGA
CATTGTAGGTAGTCGCTTCCTTGACAAGACAATTAATCAGGTGTTATGTT
GTCTTCTAAAGACGATGCATATTTTCTGACAGCATAAAAGACAGAAAATC
CGTTCTTTGCGGTTTAGATTACAAAAAACACAACATACCATATTACCAGA
GTGTGAGGCTTGGTTTGCTCAGTATCAAATTATCAGTCAATGTACTATTT
CAACCATCAAATGAGAATGTTCTGTGTTTTGATTTGTAATGTTAAGAAGG
GGATAGTGGCTTTACTACAAATTGATAAACAGTACATATAGTGTCATCAT
ATATGCTGCATTAGTTTTCCTCGCGTAAAAGTTGGTATTTCTCTTGTCTT
TTTGCAAATTGTAGTATATCTTGTTATTTGCTAAACCAGGCCCTATCCAT
TCCAATGTACGTATGTTGAATGGATCGAAATTTGGACAGATCCATATATT
TATCATCAAAATCTTCTGTGTTATTTTCCAGAATGTTCTAACAGAACAAG
ACATCCTGGATGCCCTTCCCAGAAAGAAGGCAACTATCGCGATCGACCTT
TTGACTGACACGCTCAGTCAGCGGGCGACAGAGCCTCTGGGAGAGTTCTT
GGTTCCGTACCTACAAGACCCCAACGTGCTACAGGCTGTTCAAATGTTAG
TAACCCAGGGCTCAAAATTTATTTTTCGAATAGGTGCACTGGTGCACCCA
ACCTGAAAATTTATCACGGGAAAACTCTCTCCCTCGACTTCTCCCTATCA
TGGTCCCCATATCTTTAGGTATCTAGGCCTTCTAATCTGCAGCACACATC
CTCACAAAGTTGATGTAGGCGTACGAATAGGTTGCAAATGGCGTCCCTAC
TTTTGCTACTATTGCATGGCAGTGCTTTAGCGCCCATAGGAGAACAAGCC
TTAGCCTTATGATATCTCTTTTACTCCACCGTGCATGCCCAACAAACCCT
AGTCTTGTTTCACAGATGACTTGGTTGGGGGGAGGGGGGTAGATCCCGTC
TAACTAGCTAGTAGATTAACGGTTTGTTCATTTTACGAATACTAACGTAT
CTTCATTCAAGTTGTTAAACAGACCTTTGATTAACAGGAAGAGTTAAAAA
AATGTATTTTTTTCTTCTCTTTTATAGGTTCAAGCAGGATCTTGCTGTTG
TCGGAAGTGAAATTGAAGGTGAAAACCAAACACAGCGTCTTGAGCCTTAC
GGCTACTTGGATCCAAGGCTTATTCCAAACGCCATTAGCATCTAGGCAAA
TCTGGTCGTGTATTTCCAGATTTCCAGGAGGTAGTAACACATCTTGTCAG
CTATGCGACACGGTGATAATCTCCATGTTAAGGAAAAGGGCACCAAATAT
ATACATCTGTAGACATGTTACACCTCAGAAGCGAGGTGGCAATACGCCCA
AAATAGGTACTCAAGCAAATATTTTTGGCGTATCTTACTACCTGGATGTC
TAACCTTCATCAACGTATCGATGTGGCAATAGCTCAGTTGGAAAAGCTGC
CGTTTTCAAGCATTTGGCGAGTGCAGCACCCCCACACAGTTTTGTGAAAT
GCTGCCAACAAAGTATGAGTCAAAGTCAAACTTTACTGCACAGCAATTGT
CACAGGTACAGTGTATGGCGCGATCTTGAGCAGTACTGAATTTCAAGACG
AATATCTACGCTTTTGCCTATTACAATGCTAATGAGTTGTACATAACTTA
AGACTGAATACTACGCTATCTTATATGAGTGATACAATATATAAGGAACA
TGGTTTACATGATACTACACAGGGAACAAAGTTAACATCAATTATTTGTG
CCAGAGATGATGCGATTTCTTTTGAAAAAGCGGTAGAGATATATTGGCCC
ATGTACAAGGGAATTTCGTCAGGATGTTTTGCTGACATGCAGAGTGTTCA
AGCAAGGCGTCTAAGACATATTTCATGACGTATAGTTTGTGTGTGTCTTC
GATCATTTCTCACAAGACTAGATATATATCCAAGAACATATAGATATGAC
TTTATTTTGTCTTATGTTTTTAACAGGAGAACATGTATAATTAGTCGGAC
AATGAAGTCAAGAATCTGATGGTTGTGGTGGAAGATGCGTTTTGACACCA
ATAATAACGATATTCTCTCTTATATCGGGTCCAATCAACTTTAAACCGAT
TGAAATAACATGACGTGTGACCCATTTCCTATACCATAACTGATTATATT
AGTAACGATTTCAGTTCTATACAATATACAATTTGATTGTGCATAATAAT
CTGCATAATAATTATCGTTATATACTATAGTTTGTTTCCGATTGACAAAG
CCGTCACTTCAAGTGTATAATATTCTATCATACGTTATTGGAGTCATTAA
TGATTTTCATTAACAAAGAATGGGATATCTGATTGTTTATATACTTGTAT
ATGCATGGTGGAAATATCTTAAGGTGACAATATCTATATATACATGGAGA
GAGAGATACTAGATAGACCCAAGTAAAAAAAACGCTACTTGAGTGGCCTT
GGGTTCTCCTTGCGCAGTCCTAAACCGACTCAAAAACGCGTGTGTTAACC
CTTGGTCATAAATGTACAAAACATTCCTAACGCCATGACGTCACTGTCAC
ACCTGTCTGTCAAACACATGTACAGACATACATGTAACGTTAGCGGGTGC
TGGGCTACTAAAAGACTGTAATATGTAGTGTGAATTATGAATAATGAATA
AATACATTTGCCACAAATCGTACAATACATGTTAATACAGTGTCTTATGT
AAACATTACCTTAAAGTTAACGTACGCGCTTTAGCCCCAATAGTTTCAGC
TATCCTGGTATCTATTCCTATTAAACTTTAGTGCGATGTTCACACTTACT
CACTCACTCACTCACTCACTC Coding sequence (CDS) from alignment at Sc0000158:343753..350973- >Blg01205.1 ID=Blg01205.1|Name=Blg01205.1|organism=Branchiostoma lanceolatum|type=CDS|length=1239bp|location=Sequence derived from alignment at Sc0000158:343753..350973- (Branchiostoma lanceolatum)
ATGGTCGAGCCTTCTCTGCAAGGACTAACTCTGGATGCAGCGATGCAAAA
GAAGCGTCTATACATCGTGGATCACACCAACATGGAGATAGCGTCCTTTG
CGAACGGCAAACCCATGTGCGCTCCATATGGACTGTTCTTTGTTAACAAC
AGCGGGGACCTGGTTCCTGTCGCTATCCAGTTGTATCCTAACGTCACAGA
GCAGCATCCGGTATTCCTGCCAGGCGACCCACCTTACACTTGGATGCTGG
CAAAGATGTGGTTCAACTGTGCAGATGGGAACTATCATGAGGCCGTGGCT
CATCTTGGATTTACCCATCTATTGGTTGAGGCAGTTGCACTTTCAGCCTA
TCAGAACCTTGCTCCGACCCACCCGATCCTCCGCCTGATGGAGCCACACT
TCATTTACCTTTTTGCTATCAATCAGCTGGCTCTGGAGGCATTGATCAAC
AAAGGTGGTGGCCTGGATCTTGTCACACAGATTGGCACGGTTGGCTCCTT
TGAGCTTATCAGAGAAAAGCTGAAGACATGGCGACTCGATGTTGACGGAA
CACTTCCCGAAGATTTAAAGAATCGAGGGGTGGACGACGAGAAAGCTTTG
CCCAAGTACTACTACCGTGACGATGCTCTGCGTTCGTATCACGTGATCCA
CAAATACGTCACCAGCGTCGTCAATATCTTCTACGATGATGACAATGATT
CTGTGAAGTTGAGGGACGACAAGGAGATCCAGGCTTGGGCAAGGGCGCTC
GCTTCTTCATCACATGGAAATGTGGCCATTAAGGGAGTTCCCGGGAATGG
AAGTTTCTCCACGCTTGATCATCTGATCCAGACGGTCACCTCCATCATCT
TCACCAGTAGCGTGCAGCACGCAGCCGTCAACTTTATGCAGTGGGACCAG
TACGGCTTCGTCCCCAACATGCCGATATCGTTGGAAGGGGAACCACCGAG
AAATAAGAATGTTCTAACAGAACAAGACATCCTGGATGCCCTTCCCAGAA
AGAAGGCAACTATCGCGATCGACCTTTTGACTGACACGCTCAGTCAGCGG
GCGACAGAGCCTCTGGGAGAGTTCTTGGTTCCGTACCTACAAGACCCCAA
CGTGCTACAGGCTGTTCAAATGTTCAAGCAGGATCTTGCTGTTGTCGGAA
GTGAAATTGAAGGTGAAAACCAAACACAGCGTCTTGAGCCTTACGGCTAC
TTGGATCCAAGGCTTATTCCAAACGCCATTAGCATCTAG
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg01205.1-exon-Sc0000158-1570713199:350802..350973 | Blg01205.1-exon-Sc0000158-1570713199:350802..350973 | Branchiostoma lanceolatum | exon |
| Blg01205.1-exon-Sc0000158-1570713199:350320..350452 | Blg01205.1-exon-Sc0000158-1570713199:350320..350452 | Branchiostoma lanceolatum | exon |
| Blg01205.1-exon-Sc0000158-1570713199:350076..350171 | Blg01205.1-exon-Sc0000158-1570713199:350076..350171 | Branchiostoma lanceolatum | exon |
| Blg01205.1-exon-Sc0000158-1570713199:349658..349754 | Blg01205.1-exon-Sc0000158-1570713199:349658..349754 | Branchiostoma lanceolatum | exon |
| Blg01205.1-exon-Sc0000158-1570713199:349330..349447 | Blg01205.1-exon-Sc0000158-1570713199:349330..349447 | Branchiostoma lanceolatum | exon |
| Blg01205.1-exon-Sc0000158-1570713199:348724..348816 | Blg01205.1-exon-Sc0000158-1570713199:348724..348816 | Branchiostoma lanceolatum | exon |
| Blg01205.1-exon-Sc0000158-1570713199:348093..348153 | Blg01205.1-exon-Sc0000158-1570713199:348093..348153 | Branchiostoma lanceolatum | exon |
| Blg01205.1-exon-Sc0000158-1570713199:347787..347901 | Blg01205.1-exon-Sc0000158-1570713199:347787..347901 | Branchiostoma lanceolatum | exon |
| Blg01205.1-exon-Sc0000158-1570713199:347410..347498 | Blg01205.1-exon-Sc0000158-1570713199:347410..347498 | Branchiostoma lanceolatum | exon |
| Blg01205.1-exon-Sc0000158-1570713199:346843..347016 | Blg01205.1-exon-Sc0000158-1570713199:346843..347016 | Branchiostoma lanceolatum | exon |
| Blg01205.1-exon-Sc0000158-1570713199:345979..346142 | Blg01205.1-exon-Sc0000158-1570713199:345979..346142 | Branchiostoma lanceolatum | exon |
| Blg01205.1-exon-Sc0000158-1570713199:343753..345496 | Blg01205.1-exon-Sc0000158-1570713199:343753..345496 | Branchiostoma lanceolatum | exon |
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000158 | genome | Sc0000158:343753..350973 - |
Properties
| Property Name | Value |
|---|
| GeneID | Blg01205 |
|
