|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at xpSc0039696:8110..12789- Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg01175.0 ID=Blg01175.0|Name=Blg01175.0|organism=Branchiostoma lanceolatum|type=mRNA|length=4680bp|location=Sequence derived from alignment at xpSc0039696:8110..12789- (Branchiostoma lanceolatum)
TGAACAGCTACACCTGTCTGTGTCCTACTGGCTACACCGGCGCCAACTGC
GAGCTAGACGTGGATGAATGTATTACTTCACCGTGTGAAAATGGAGCCGT
CTGTAGAAATTCTGTCGGAAATTACAGGTAACGTTGGGTAACATAAATTC
GCGGGGTACTTAAATTCGGGATTTTTCGAAAACGGGGTATTTAGGGATAT
GTGCTAGATGCAACATCAGTAATACCGCTAGAAATGCAAACTTGACAGAC
TAACGTATTCAGAACACTGTCTGAAAAGCTTCGATAACCATGCATTAGAA
GTTGGCTACGTCAAAAACTCTCCGTCCCTTATTGTCACAGTCTGAGGGCT
TCGTGGGAGAATTATACTGCATAGTTGTTCACTGGTTTATAAGACAAATG
TCACATCCGCTTCCTGCTCAACACAACTATTTATAATACAACTTATTAGA
ATCTCTTTTGCTAACCTACAACTGGACTCTAAGTGTGATTTATCATCAAA
ACGCCTCTTTGTTGCTACAACTAATGGCTACGGCATTACGGNTTCCCGCC
GCCATATTCGTTACCCAGAATCCTGCTATTCGGCAGACGACAAACGTTTG
CGAGGAACACTTTTTGTCTAAATGTTGTGTGTGATAGTGGACTGAAGACG
ATATTTGCCTCAAATTTTGCTCTTAGCACAAACAGAAACACATGGACATA
GTAGTATTACCATTTCTACGGCATCCAGCTAACGCCCCGATGAATAATGT
ACAAATTTCACGGGTTGTTCCCGGAGGCCTGATGCGTGCGGTACGGCCGT
TTTTTCGTGTGTTTTTTTTACTTGGACACGTCTATATCCATAGCACTCTC
CTCAAGCCAAGGATGGAACGAATAGCTGCTGTATAAAATGTAATTAGCGG
TAAGATATTCAAGACGAATCTTCTCTCCCGAATTAATGTGCACCCCTGTC
CGACAACACCGTCATTGTGCGTGCGGCGGACGGTAGTTTCAAGTTGAAAT
ATTATGGTGTCAGCACGACTAGAGACAAAATCTACCATATATATGATTAG
TGCAAAGATAGTACATGATACTGACAGAATAATAGAAAAAAAGGATGGTT
TATTGTTCTGCTAGATTGATTTCAGTCAACCATTATCGGAAAAATCCCGA
ATTTATGTTACCCAACGTTATACTCTTTTCTTGTTCTTGTTTTTTGGTTA
CTAAACAATACCCCTTAGTTGCGTCAAGGCGTTCAGGCGTGGTAGTGTAC
GCTTCTTGGGTCTTTCTCAAGTGATTTGCAACGGCCCCTCTGAACTTTTC
CAGATTTTGTTCTTGTGTTACGGAGTATGGTAATTAGTTCCAATCCTTGG
TAGTTCTCGGTAATTAAGAATATCTTTAGCAGTCCTTGTGGACGCTTAAA
GGGGATTATTTTGAAAGGGTTTGGATGTTTAAGCTGCAAGTATGTATCGA
CCGGCAAGGCCAGAAGGCCTTGTCTCGCTTTTTGTAGTACTGTGAGTCTG
TTACCTGTTCTTCTGTTCTGTAGTGTGCCCCATCCTAGATTGGTAACTTA
TCTTTAAAAACGTTTTACCAAAGGAAAATGACAATAAGACAAACGATTCG
GAGAATGGTGTGCATCTAAACTTATAGCATCATATAGATAATGACACTTC
TCTTGCTGGTTTGTATCTTAGAATTTTTCAACATTCATCTTCAGCTAATA
CAATTTAGAGTACTGTTTTAACTGTTTTAATACATGGCACTATGTATACC
TAGCAGATGATTTAAGGTATCTATTTCAAGCTTACTTTTCAATTACATGG
TTCCAGCTGTACCTGTATGGTGGGCTACACAGGTCAACATTGTGATATCA
ATGTGGATGACTGCGCAACGACGACCTGTCAGAACAATGGCACATGCGTG
GATCAGATAAACGCCACTCTTTGCCTTTGTCCAACGGGTTTTACAGGTGT
GTTTTATTGATTGTATTCTTGGGAAATCTAAATTTACAATCATTATTGGT
CAACTCAAAGTAAAGAATGTGTAATGATCTTAGGATACTCCATAGCATAG
ACGATATTTCAAAGCACATGAAGTCAGCTTAAAATCCGGCACCCAAATTT
AATGTGTATGGGCAAGTACACGGGATCGAATGTGAAATGTAAGAAAAAGA
GAGAGAAAAATGTTATATTTTAGCTTACATCTTTATCTATCAACTCGGAT
AACTTAATGAATTATGAAATATCTTCATACTGTATCTAATTATTATTCCT
AGGGGAATTCTGTGAGGTTGATCCTGATGACTGCTTGCCAGATACTTGCT
ACAACGGAGGAACTTGCGTGGATGGTGTCAACAGTGTTTCCTGTCAGTGT
GTCCCGGGTTACGAAGGTACATTTTTATTCCAAGGTTCTTCTATGCTTGA
CAGATTAAGGCCGCATTTCTATGCCATTCTTTTCATTATTGTGTTTGCGG
TTTTCTTGGTTAACAGAATGACATGCGCCTTGTATTTTCAGGAGATTACT
GTGAATTGGAGACAAATGAATGTTCCAGCCTTCCCTGTCAAAACGACGGC
AACTGTACCGACCTTATCAACGACTACACGTGTTCCTGCCACTCTGGGTT
CACTGGAAAAGATTGTAACATCAGCCTCAACGGCTGTTCAGAGGGTAGAT
GCAAAAACGGAGCAGTCTGTAAGGACATCGTTGGAGGCTTCTCGTGTGTT
TGCAAGCCTTCCTTCACAGGCACCTTGTGTGAAACAGGTTATTGTCATTT
CCCTGTTCAGGGCCTAGCCTGGTCTTATTTGTCGTACGATCTCAAATTAA
AGGCATCATAAGGATATGTGTGCATGTGTCTTACAATAGAAACTACAGTT
GTCTTGTCACAAATAAGGCTTAATCTTAGAATCTTATCGGTCATTGGTTA
CTGTACAGCCTGTTTGAAAATTCTCCGACATGAACGTCGTACTAGGCAAT
ATCACGAATGCGGTGGCGCTGTTAATCAATTGTCATAGCAACCGGCAACG
AGAAGACTGTAAGCAGAGATTGGGTTTTTATTTTGCGTGAGACGTACTTT
ATGAGTTTTCTCCCATGATCTCTGAATTACGAACTGAATTTTTTTTTCTA
GAATTGTCAGCCGAGTTCGACCTTTACTTGGATGGTGGAGACGACAGCTA
TGCAAGTACTGACAACTATATACCGGACATGGACGCATTTACACTTGCAT
TTTGGATGCAGACTACAGACCATACAAACTACGGAACACCGTTCTCATAT
GCAACGGTACATATCTTATCGTTTATTGTTTGGGACCTCACTCTTCACAA
TGTAATGCGAAGCAGAATATTAACCAGTCATTATCTAACTGAGTGTTGTA
TAGAATATGTTTTGTTGCAATTCAAATGATGTAAAAGCAGCTGTATATTT
AAAATAACACATGGGAAGGTAAAAATGTTTTATATTTGCATTCTGCTTAC
TCTTTACTTTATTCTATAACGGACCATAGAACGACGGCAACGCAGGGAGC
GACAACGCTCTGACCATAACCGACTACACGGGATTTACACTGTATGTACA
TGGCGAGGCTGTGTACACAGGTATTGCAATTAACGATGACAACTGGCACC
ACATCACAATGACATGGGAGACTGATTTAGGGAAGTGGACAGCTTTCTTT
GATGGAGTGAAAGTCGAAAGTGACGAAGGGCTTCAAGCAGGTGTTGTTAT
ACCCGGTGAGCTTTTCAAAACCAATACGCTGTTTCAATCCAGCTTTTTTT
TTATGAGACAAAATCTATCAACGTGCGATGATTCAGATATGTTTCAACTT
GAATTCTTCTATTTGTTTTGGAACTGACATTTCTTGATAACGGTAACCAT
TATCAGGCTAAGTACGAATCTGGCCATGGCACAAACACTTTTCAACCAAG
CCGATGCTATCGTTTTCTTTTAATGCAGTTCTGTTCATTGATCACTATGG
ACGTTGTTGTTGGTATTGCCACAGGAGGAGGATTGGCCATTTTGGGACAA
GAACAGGACTTTTTCGGCGGTGGATTCAGCCCAGACGAGGCCTTTATCGG
TCGCCTGCATGGGTTAAACTGGTGGAGTCGTGTCTTGTCTGACAATGAAA
TCTCGGAACTAGCAGCCAGCTGTAATCACTCCGCTCGAGGTGACGTCCAC
GCTTGGGCCGACTTTGCGCCAAACATCGTGGGAAATATAAAGGTGTCGAA
TGCGTCACTTTGTGATGGTAAGTTTATTGTTCAATTCCTCGTTATATAAA
ATGTGTTATCTGTCTTCCAATTTCTTTAAACCCACGAATCTGTGTTGAAG
AGCATTATAAAAAATTTATGTATCAATTAATAAATACAAAAGTTCTGAAG
ACCCCCATTTCACTAGACAGCGTTCTTGCTGCGACCTAAATCAAATTTTG
GCAATCCTTGATTTCATAATTGGAATATCATGTAAACTATAAAAGTATGT
CTGAAAAGACAACAAAACGAATAAAGCGTAAAATATTAGTTTTGTTTATC
GATGGCATTTGTTGAGCGCTCTGTTAAATTCAAGGTCGCAGAGAGCACGC
GGCGAGAGCGCCGTCCTAGTGGAATGGGGGTATAATCAAAAACATCACAA
AATAGGCAGCGACCGAATCAGTGACATTCCGTCTGTTTGCTCAACACTTT
CAGACACGAGGGAGTGCAAGTCCTCACCAT Coding sequence (CDS) from alignment at xpSc0039696:8110..12789- >Blg01175.0 ID=Blg01175.0|Name=Blg01175.0|organism=Branchiostoma lanceolatum|type=CDS|length=1276bp|location=Sequence derived from alignment at xpSc0039696:8110..12789- (Branchiostoma lanceolatum)
AACAGCTACACCTGTCTGTGTCCTACTGGCTACACCGGCGCCAACTGCGA
GCTAGACGTGGATGAATGTATTACTTCACCGTGTGAAAATGGAGCCGTCT
GTAGAAATTCTGTCGGAAATTACAGCTGTACCTGTATGGTGGGCTACACA
GGTCAACATTGTGATATCAATGTGGATGACTGCGCAACGACGACCTGTCA
GAACAATGGCACATGCGTGGATCAGATAAACGCCACTCTTTGCCTTTGTC
CAACGGGTTTTACAGGGGAATTCTGTGAGGTTGATCCTGATGACTGCTTG
CCAGATACTTGCTACAACGGAGGAACTTGCGTGGATGGTGTCAACAGTGT
TTCCTGTCAGTGTGTCCCGGGTTACGAAGGAGATTACTGTGAATTGGAGA
CAAATGAATGTTCCAGCCTTCCCTGTCAAAACGACGGCAACTGTACCGAC
CTTATCAACGACTACACGTGTTCCTGCCACTCTGGGTTCACTGGAAAAGA
TTGTAACATCAGCCTCAACGGCTGTTCAGAGGGTAGATGCAAAAACGGAG
CAGTCTGTAAGGACATCGTTGGAGGCTTCTCGTGTGTTTGCAAGCCTTCC
TTCACAGGCACCTTGTGTGAAACAGAATTGTCAGCCGAGTTCGACCTTTA
CTTGGATGGTGGAGACGACAGCTATGCAAGTACTGACAACTATATACCGG
ACATGGACGCATTTACACTTGCATTTTGGATGCAGACTACAGACCATACA
AACTACGGAACACCGTTCTCATATGCAACGAACGACGGCAACGCAGGGAG
CGACAACGCTCTGACCATAACCGACTACACGGGATTTACACTGTATGTAC
ATGGCGAGGCTGTGTACACAGGTATTGCAATTAACGATGACAACTGGCAC
CACATCACAATGACATGGGAGACTGATTTAGGGAAGTGGACAGCTTTCTT
TGATGGAGTGAAAGTCGAAAGTGACGAAGGGCTTCAAGCAGGTGTTGTTA
TACCCGGAGGAGGATTGGCCATTTTGGGACAAGAACAGGACTTTTTCGGC
GGTGGATTCAGCCCAGACGAGGCCTTTATCGGTCGCCTGCATGGGTTAAA
CTGGTGGAGTCGTGTCTTGTCTGACAATGAAATCTCGGAACTAGCAGCCA
GCTGTAATCACTCCGCTCGAGGTGACGTCCACGCTTGGGCCGACTTTGCG
CCAAACATCGTGGGAAATATAAAGGTGTCGAATGCGTCACTTTGTGATGA
CACGAGGGAGTGCAAGTCCTCACCAT
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg01175.0-exon-xpSc0039696-1570713199:12663..12789 | Blg01175.0-exon-xpSc0039696-1570713199:12663..12789 | Branchiostoma lanceolatum | exon |
| Blg01175.0-exon-xpSc0039696-1570713199:10844..10983 | Blg01175.0-exon-xpSc0039696-1570713199:10844..10983 | Branchiostoma lanceolatum | exon |
| Blg01175.0-exon-xpSc0039696-1570713199:10424..10537 | Blg01175.0-exon-xpSc0039696-1570713199:10424..10537 | Branchiostoma lanceolatum | exon |
| Blg01175.0-exon-xpSc0039696-1570713199:10053..10298 | Blg01175.0-exon-xpSc0039696-1570713199:10053..10298 | Branchiostoma lanceolatum | exon |
| Blg01175.0-exon-xpSc0039696-1570713199:9534..9688 | Blg01175.0-exon-xpSc0039696-1570713199:9534..9688 | Branchiostoma lanceolatum | exon |
| Blg01175.0-exon-xpSc0039696-1570713199:9085..9310 | Blg01175.0-exon-xpSc0039696-1570713199:9085..9310 | Branchiostoma lanceolatum | exon |
| Blg01175.0-exon-xpSc0039696-1570713199:8573..8815 | Blg01175.0-exon-xpSc0039696-1570713199:8573..8815 | Branchiostoma lanceolatum | exon |
| Blg01175.0-exon-xpSc0039696-1570713199:8110..8136 | Blg01175.0-exon-xpSc0039696-1570713199:8110..8136 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| xpSc0039696 | genome | xpSc0039696:8110..12789 - |
Properties
| Property Name | Value |
|---|
| GeneID | Blg01175 |
|
