Blg01173.0 (mRNA) - B. lanceolatum

Overview
NameBlg01173.0
Unique NameBlg01173.0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



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Sequence
The following sequences are available for this feature:

mRNA from alignment at xpSc0039696:72758..74049+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg01173.0 ID=Blg01173.0|Name=Blg01173.0|organism=Branchiostoma lanceolatum|type=mRNA|length=1292bp|location=Sequence derived from alignment at xpSc0039696:72758..74049+ (Branchiostoma lanceolatum)
TGGAAAGGCTTGTCATTTCGACTGCAACGCCGGATACACGATTAAAAGAG
GGTCGCGGTCACGGCAGTGCATGGCTGATGGCTCCTGGTCGGGAACTGAA
CTTGAATGTGAAGGTATCTGTTGCTTTTCATACCTATAGGATCAGATTAC
AAATGAACTCATTGTGAGTTATCTAATGAATAATGGCACCAAAATGTTGT
AACACTTGGAACACTTGCCTGTCAAAGGAAGAAGATATTTTTGTCCGTAT
AACACATCAATCTCACGTACAATCTATGTGACTACAAATACTGAATATAC
TGCTAATACAACATTTCATGCCAAATTGACAATACATGTCCTGATGACAT
TATGTTATAAATTCTTCCCATCTAGTGGAAACCTGTACTGGGCTTTCGAT
TCCACCCAATGGAGCCATCAGCCCCATGACATGCACTTCCGAGTCAAACT
ACGGTACAATCTGCCATCTGAGTTGTGACGTGGGGTACCGAACAAGCGGA
CCGACAGAGCAAACGTGCAACCCTGGTGGACTGTGGTCTGATCAAGGGAA
ACCGACAACGTGTATTGGTAAGTAAATCTCTATCGATCTTACCTGCATAT
TAGTTTACCTTACTATTGGTGTTTGAGTAATAGTCACCAGTCACAGTCAT
GAGACACCTGGAGGAACTGGGCTTCACTTGGGAGTGAGTGAGAAGGCAGG
CTCTGGACAGAATTCGAAGTTCGTGGAAAGCAGTGGTGGCCCGCATCGTC
GACAGATGAGAGCGATGATGCTGCTGCTGCTGCTGCTGCTGCTGCTGATG
ATGATAGTCACCAGAAAAAGACCATTATCATATAGACAAGCTGTGTATAC
ACATATCACTAGCTCCCATTTCTATTGGTTATACCAAGGAGGTTTGGTTA
TATAAAACCTCCTTGGTTATACAACTATAACGTCATGACCATGGATTAAC
TAAGACGAAAGCAATGCGCAGTTGTATGAAGGATGAGAGTGAGCTTGGTT
TTGTACTTATGAACTGTGAATGTTGGATGTTGCAACAGGGTGGATATCAA
ACGATGTCAGTTTATTTCGAGAATAGAGTGATGATTACTTTCTGACAAGA
TTGTGTTTTTTTCTAAACTTATATCCTCCTGATCTTTCAGATACCCAGGC
TCCAACATTTACCAACTGTCCAACAGACCAAACCGTATACGCAGGCTTGG
GAGAGACATCAGCAACAGCCACATGGACAGTGCCTACCGCAACTGATAAT
TCAGGAGTTACTCCGACAGTAACCCGTGTGGAAGGAAACGTA

Coding sequence (CDS) from alignment at xpSc0039696:72758..74049+

>Blg01173.0 ID=Blg01173.0|Name=Blg01173.0|organism=Branchiostoma lanceolatum|type=CDS|length=456bp|location=Sequence derived from alignment at xpSc0039696:72758..74049+ (Branchiostoma lanceolatum)
GGAAAGGCTTGTCATTTCGACTGCAACGCCGGATACACGATTAAAAGAGG
GTCGCGGTCACGGCAGTGCATGGCTGATGGCTCCTGGTCGGGAACTGAAC
TTGAATGTGAAGTGGAAACCTGTACTGGGCTTTCGATTCCACCCAATGGA
GCCATCAGCCCCATGACATGCACTTCCGAGTCAAACTACGGTACAATCTG
CCATCTGAGTTGTGACGTGGGGTACCGAACAAGCGGACCGACAGAGCAAA
CGTGCAACCCTGGTGGACTGTGGTCTGATCAAGGGAAACCGACAACGTGT
ATTGATACCCAGGCTCCAACATTTACCAACTGTCCAACAGACCAAACCGT
ATACGCAGGCTTGGGAGAGACATCAGCAACAGCCACATGGACAGTGCCTA
CCGCAACTGATAATTCAGGAGTTACTCCGACAGTAACCCGTGTGGAAGGA
AACGTA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg01173.0Blg01173.0-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg01173.0-exon-xpSc0039696-1570713199:72758..72870Blg01173.0-exon-xpSc0039696-1570713199:72758..72870Branchiostoma lanceolatumexon
Blg01173.0-exon-xpSc0039696-1570713199:73133..73324Blg01173.0-exon-xpSc0039696-1570713199:73133..73324Branchiostoma lanceolatumexon
Blg01173.0-exon-xpSc0039696-1570713199:73898..74049Blg01173.0-exon-xpSc0039696-1570713199:73898..74049Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
xpSc0039696genomexpSc0039696:72758..74049 +
Properties
Property NameValue
GeneIDBlg01173