Blg01157.2 (mRNA) - B. lanceolatum

Overview
NameBlg01157.2
Unique NameBlg01157.2
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000179:422054..431345-

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg01157.2 ID=Blg01157.2|Name=Blg01157.2|organism=Branchiostoma lanceolatum|type=mRNA|length=9292bp|location=Sequence derived from alignment at Sc0000179:422054..431345- (Branchiostoma lanceolatum)
CACTATCAGCTTTAAAACTGAACTTGCGCATTGAAAATATATCTAGCTTC CCTTTGAGAAAAGTGGTGTAGTCCAGTGGGTTTCCATTTAAAGCCTGGGT CACTCGTTCGTCCGGTTAGGACACAAACCCGTATAGCACGTTCTGTTGGT TGACATTTGAGCAGCTACAATATCAAGATGGCGTCCAACAAGGTATGGTG CTGTCATATGTAGCTTCCGCTCACTATTTCTTTGTGATTATGGATTTTAA CATCTATAGCCACATAATGTGCATGTACAGCTAGCTGTAGAGTTGAGAGG GTGGAGGCTCATATAAACGTTACTGTACGTGCACGGAGGGTTTATGGTCA TGGCAGTATTATACTAGGTTATACTAGTATGTAAATGTTGATATTCGTTT TCAAAATCATAACTGAACATGAAATTGGCCATTGTTTCAGGGTTTGCAAA TAATAGGTTGGCCTGTTTTGTTGATTCTCCTTTCAATCCCCGGGTGGAAT TGGTGTACGTGCTTACTGTCAGGCGTTTAACCTTGTATTTTGCATATTCC TGCTAACAACAACGCCGGCGGCCGACGTCATAATATTTTCGAGCGTGAGG ATGTTAGCGAGAGAATTTAATATGACAAAGAAATATTTTTGGGAGCATCA TGAATCGTACTTTGTCTCGTATTCTTATTTCAACATTTGTTTTGTTGTTG GATCTTCTAAATCTTATCTGTCTGAGCTGAGTTGGGGAGGTCAACGTTCA TATTTTTTTCTGGGGCATAATCTTTAACACTAATAGAATTTAAATGCTGT ATTTTTAGGATGGTTGAGGTTTGCAATCTACCCCCTAGTTGCACGCAAAG CAGTCTTCGATATTGTGGGGAACCGTCAAATTGATGATCAAACATCATAT GACCATGTCCCACCCTCTAGGCTCTACCCAGCTAGGGGAAAATGATTTGT TGTCTAGTTTAAGTGTTAGCCAACAAAATTCCGACCCAAAGCTATATTAG TCTCCTCTGTGGGATTGTGACGTCATGAATGACAACATATCTTCGTCTTG AGCAGGAAATGATGACTTGCAACAAAAAGACACGACTCGTGTTTTACTGG TATAGCCTTCCTGTTTTCTTGGAGCAGACGACAATGGTTCAGACCATATG GTAATCTCTACTCTTTGATTGGTCACAGCTGGAGGCGTGGTCCTAATCAG CTGACACAGATCTGGCGCTGATTGGTCAGATTTGGAGGTGTGTCACCCCG TATGGAAACAACAAAAAGAAACTTGCTTGGTTAGTCAGCACTTTGACCGC GTTGGTAGTGAAAACAGTCGAGTTTTCGCAGTTCTTACTAGACTTTCTAA CTTCTTCTCATTCAAAGGAGACTCACAGCCAACACATGGAGACCAACGCG ATGACCCTGACCCGCTGGGTGCTCCAAGAGCAGCGCAAGCACCCGGGGGC GACCGGCGATCTCACCCAACTTCTCAACGCGATCTGTACGGCCATCAAGG CCATAAGTACCGCCGTCAGGAAGGCGGGAATCGCCAAACTGTAAGTAAAG TGTGCAATGACCAGGATCACGACCTTCTACAGTGCTTATAGAAAGCTAGT AGAATGTACGCGCACTCCTAAATGACTGCAAACTTTACAAAAGGACCTAC GTGGCCGGATGAATGATCATGTTTGTACAGAACTTAGCCCGCCATTTTTT TCTTCCGGGGTGTTGCAATTTTCTTTAACGACCACATGTTTACTCCTATC CCACAACGTGCATATGATTTAAAAGGTTGGTAGACTAGTAAATTTAAATG CGGCCAACGAAATCAAATCTGCCCTGATGGAGTCACAGACACTGAGACAG GACATCAGAAATCTGATCCCCTCGGAAAACCGGTCTTTTTGCTGGCAACA TTGTTTAATTAACCTTCTTTGAATTACAAGGAAGTACATTTTCAGTAAAT GCCCCTAGCATTTCCGCAGCCATTCCCTCCCCACTGTGCAAGTGTAGAGT CAGGTACAAAGTGCCATGATCGCTACGTGCTGTTGGTAACGTCATCTTGT AACCTCATATCCACCTGGCCATAGTACGAGGTATGACCTTTGATCTTGCC CATGTTGTTTTATCCTTGTGGGATTTGTGCGCCAATTTCCCAAGGGTCAT TGACCTCCTGTGGTACCCAAAGGCCATTGACCAACTGTAGTACAAAAGGG GAGGGACCAGTAAATGGACTTTCCATTGCAAAACATGGTTAAGCCATGCA AAAACAATCACTTTAAAATACATTTACCTACATTTCAAACCACAAATCTT TACTACTCCTGCAAAGCTGGTTCTTTTGGGAAAGAAAGGAGGTCAATTCT GGCATTTTAACTAGCCACAGCCAGAAGTTTTTAAGATCATGAGACCAGGA TTTTACCCCCTGTATCTGCTTGATGAAAAGTTGTTTGAGTTGAAAAAAAT GGCCTTTAATTGTTCGGTCAGCAGTGAACAAAATCATTGAAGAAGAATGA ATGAACTTAATTGCTGGACAGTTGTACATGGTACAATGGATAGCAATAAT CAATAACGAAGTAATCAACACGATATTCTAAACACTATGGGAATATGGAT TTCTGATATTCCAATGGATATTGTAAGTCAAACATATCTACATCATCTGT TAGTTATTTGTAGCGTGTTATTGAAATGTTTTGCAAAAGTGCTGTTTATC AATGTTACCAGTTTTCCTCTTTTTGTTCAGTTACCAGGGCTAACCCTTTG TAATAGCCTTTGGCTAGTTGTGTAGCCCTGGCTGTACTTTTTTTACTGCC AAATAAATAGATCAAACCATTATTCCCTTTTTTGTTGGTATCACTTCTTA CCTATATATCCCAAGACTTTGGAAAATCTAAAGATCATGGTTATTCTCCC AGGTATGGCATCTCGGGAGACGTGAACGTAACCGGAGATGAGCAGAAGAA ACTTGACGTCCTGTCCGACGACCTGTTTGTCAACATGATGAAGGCATCCT TTATGACCTGCGTCCTGGTCACAGAGGAGCGACCTAACGCCATAATTGTG GAACCGGAGAATCAGGGCAAATACATCGTTTGCTTCGATCCTCTTGACGG GTCGTCCAACATCGACTGTCTGGGCTCCATAGGCTCCATCTTCTCCATCT ACAGAAAGGTACGTTCAGTGCCCATTACAGTACAAATGTAACGAGCAAAG TCGTTATATCGAACGGCGCCAGCTGTTCAAACATAGAACAGCCGATCCCG TTCTCTCATTTGAATAAAGCAGTTGTTTGCGAGAATTCCTCAAGCACAGA CTGCGGTTGGGGGGAAAGAATGTAACGAGCAAAGTCGTTATATCGAACGG GACCGGCCGTTTGACCATAGAACGGCCGATCTTGTTCTCTCATTTGATTA AAGCAGTTGTTTGCGAGAATTCATCAAGCACAGACGTGTCTTATTCTCTG ACTTCTCACACAATGTCTGTTATTTGATATCACAAGTGATGAATTACTGG AGAATGCATAGGACTTTGAAGCGCTCATTTTATGAGATGTGATTGACATT GATTGATTGATTGATTGACATGTCCTGTTTGTGTCAATTTACTTCTAATT CTTCTTGCATTCATGGATCTAATGTGACAATGTTATTCTAGATGTTCATG ATGTCTATCCTGCTGGCATTTGCCGTGTAATAATAATATCAAGGAGGTTC TTTCTGAAATACAACCTCCTTCAATTTTGAATAGAATTTCCTTGGTAATA TTTACTCTTACATGTCCGCTATTAGACCAAATCTCAGAATTCTGCTTGCC TGTCAGGGGCTCCCTTGGAAATCAGCCTTATTTAGCTAAATGGTCTACCT GCATGTATCCAAGACTAATAAGAATAAAAAGGAAATTCTAACTTTCCATC TAGGACACGGAAGGTGAACCCACAGCACAAGACGCCCTCCAGCCTGGTAA CAGGATCGTTGCCTCGGGGTACGCGCTGTACGGCAGCGCCACCATGATCG TCCTGGCCATCGGACACAACAGCGGCGTTCACGGCTTCATGTTAGATCCT GTAAGTATATATAGAGTTGTCTCATGGTGTCGTGTTAGACCCTGTAAGTG TACAGTTGTGTTCATAGTTTCATGTTAGATCATGTAACTGTACTAGTAGA GTTGTTGCAGAATACAAAAATTACTCAAGTAACTGGACAGATGTCAACGG TAAGTTGTTTCAGGTAGCATCCACTACCTTTCATGATCATCAGTGACTGA CAAAAGATAGACTGGTAGATGCTACCTGAAACGTGCAACCATTGCTGGTT GCTAGTTACATGTACTTGAGTAACTTTTGTATTGTATTTGCTATCTTATT ATTTTGATTTCTTACCTTTATTGATGTGGAGTTGTTGCTTTCCCTGGTAA TTCTTGAATAGATCATCTGATGGTATTTTGTTTCTGTCAGTGAATAATGA AATTTGGTTTTAGCGTTTTTTTTATTTCTATACACATGCAAAATATTGTA CTGTTATGTTCACTGCAAGATTGTTGTATTCTCCCCCAGAGCATAGAATT TACCTGTGCCACACAGCAAATACATGTGAATGTCAAACAAAGTTATGACA GTTAATGACTATTCTATTCCTCTTACTTGTAGTCAATCGGAGAGTTCATT CTGTCTGAACCCAACATTCGCATCAAACCTCGGCATGAGATCTACAGCAT CAACGAGGGCTACACGCAGTACTGGGACGAGGCAATCAAGGAGTACGTCC AGAAGAAGAAGTTTCCAGAGGTCAGCAATTTGTACATATCAGTAGCCTGT GTTTACACAAGCTCTCAGCCGGAGGTTACTGACCCCCACCCCAAGAGCTT GTGGCACAATACGTCTAAGCCGTGAAGTCCAAGTCTAGGGGGATGGCGGT TACAGGACCGGCTGGCCGCTAGGAGCGCTATACATATCAGCTACTAATGA TTTTGATTTAGAAATGATTTGAATGAACATGTAGAGATAATTGATTGTCA CCAATGTGCATGTAAGCTCGTCAATTTAGTAACATTACATTATGTACACT GTATTGCCCAATATTGCAGCTACAACATCCTTGCAGTTCTATGACCAAAG TCATCATTGTTCATCATGATTTCAGTGATTGAAATATTGATCAGTTATCA GTAATGAATGCAACTTACCTTGTAAGGAAAACAAAAATACAGAGCAACAA GTGATTTTATGATAACTTCATTGATGTGAATGGGTAAAAATATGTTAAGA TGTCTTTTAAATGTGGCATAAGTTGTGTTCTAGCTATCTATAGTATCGGC CATCGGCCGAGACTAAACAAGTTCTTACATCACTCCATATTGCCCTATCC AACATCATTTGTCCTAAGTGTTCATATGCAATCCCAGTGTCTCTAACGTT AACTAAACTATCCGTAAAAGTTGTAAGTTGTGTTAACTGAAAAAGGTTGA TGACTTGTGATATGCTGTTTTGAAATGATTGGTGAATTCTTCTCTCTTTA GACTGGGAAGCCATACGGATCACGTTACATCGGTTCCATGGTGGCCGACG TTCACCGGACTCTTGTTTACGGAGGAATCTTCATGTACCCTGCACACAAG AAGGCGCCAAAGGGCAAGGTGAAGATATATGGAGTCTTAACTTCTTTAAA AGACTGTTTAGTTTCCTTCTTGGACCTTTTTTTTTATTTTTTATTTTTTA CCGAACTCGCTCAGTGCAAGGCCGTAGAGGGCCACTCATCAAAGCACTGA ACTAATTCTTACTGTAGCAGCATCTCTTCACCCTAGGTCAGAAACAAGCA TGACTTCACTGACCCATTAGGAGAAGCAGGGGTTACGAAGGCTGCTCGGG AAATTCCCTACCCCATTTAGGCTGGAATGTTTTGATCCACTCACACGGGG CATGCCTCTACTCTTTTTCGAAAGATGTGGTGGGTTCTTTTACGTGCTCA AGGTGTGACTCTCCTCAAACACGGAACCTCCATTTAACGTCCTATCCGAG GGAATTATTATTATAATAGTAAGTGAGTCAAACACTCACTCTTGGGTTTG ACTGTGTCAATCCATATTGATGATTTCAGCTATTAGCAAGTCCTGGAAAA AGTGAACATGTTTCACAACATACAATCAAGACGTTTTTCATGTTCTAGTG TTATCATTTGGTAAAACCAGACCAAAGACCAGATGACTGTCTTGTTAGAA CCTTGACAGAAGTAATTGTTGCTATCAACTTTCGCACATTTGTAATGAAG GAAATCAGCTACTGTTGAAATACAATAACTTTTTGTTTGTTTTTGCAGCT CCGTCTGATGTACGAGTGTAACCCCATGGCATTCATCATCGAGCAGGCAG GAGGCATCGCTACAACTGGTAAGTTCTTCAGACTCCTGGAAGTTGGAACC CAAGCAAAGTGCTAATTGTGCTTGCCATTGTAGCTTTTTTTGCACCAAAT TTGTATTGGTTTGTGAGTTAGTCATTAGGGAGGAGTTTAAGAAAATATTT TGAAAAGGGTATGCTCCACTGGAAGCCAAATCTGTACTAGGATAGTCAGG TTTGTTCAGACCCTTGTAGTGCATAGTGGCACATAGGGCAGCAAGTTTCC TTGCTGTTTCAGTAGCAGGGAGGGGTTGCTAGCTCTTCCCCTTGAAGTTT AATGTGCTCAAGGCACCTCCTTAAACACAGGACCCTCATTTGTGTCCCTT CCGAAAGACGGGTGCAGTCCCAACCGAGATGTCCTGACCCCGGGATTTGA CTTGGGGCCTCCAAGTTCCCAACTAATTGGAACCAGAAGCTCAACTGTGA GGCTGCTACCAGTTGTGTCACACAGGGATATCCCTAAAAGGCTTGGATAG TCAGATTGAATACCTTCAAAATGTTTGTTTATGAAATGTTACTTATGATA TATGTATCCTGGTTTCATGTGTCTAACATATAAACCCTGCCCACTGTGTA GGGGAGGGGCGTGTTCTAGACGTGGTTCCCACGGACATCCACCAGCGCTG TCCTGTGTTCCTGGGGTCACCTGAGGACATCAAGGAACTTCTAGAGATCA TGGAAAAGCACAAGAAGTAAGGAGGTCGCTACCACAACGCGGGAACATCC GAAGACAAGATGTGTTGTCAAATGGAGATTATCATTAACTAGACCCTATG GAGCAAATGTACTGAATCTGGTTGTTGTGGGAAATGACAAAATTTACTCA TTGATAAATAAGATATATTTTTCTCATCTCCTTCACTCTTATCATATTGT AATCCAACCTCATATATAGTTACCTACATGTACATGTCAATTTGGTCCTC TTTACTGTTCTGTAACTAAAATTTGGATTCAGCTTTTACAAACTTTCATT TTAGTAACTTTCATAAGCAAAGAAAGCTTCCTCGCAAAGGAATGTGTATT TGCTAATTGCTTAAACCTTCTTTTATAAATACATGACATTTGGTGTAAGG GATGCTTAATGTGTTACATGGTGCCTCTTGTTTACTAGATAGACAGTAAC TGGATGAGTAGGGTCCTGGTAGAAAACTTGTGAACTGTGACAATAGAAGG CAAGCATTCCATTCTGAAGCAGTGCTAAGTTAATGTGATACTGCTGCTGC TATAGAGTACAGAATGCAAAGATCATATCTAATTTTAAAGGCATCCAGAG CATTTTATGAGGCTTGAAACTGGAAATATTCTAGTTGCTGTAATCTTTAT GAAATTGACGTTTAATGCCACTGTTTACCACATTTGTGTGCGGATTTCTT GTCAAAAGTGCTCAAAATCGGCACAAAAACAAGCTATACATGGTGATCTT TTAGTTTCAAGCGCCTAGTGTAAATAGACCGATACCATAGCCCCGCCCAC CTGTCAAAACGTAGAAATGCAAAATTAAAACATATTATATAAACAACGCA AATATTTGATGGACATGCAGTCACTCTCTCTTTGGTCGAACCGCTAATTG TGATGAACAGTCAGGATCAGTCTATTAGGGCTTGGATTTTCTATCAGTTC TCACCACACAACGACATCGTATCTTTGCTCCTTTAATGTCGATATGTAAT GGTATAGTGTTATTGAAACTTACTATGTGTAGGAATGACTACACATTGGA GTTTTTTTATTCAAGCTTCAAGCGTCATAAAATGCTCTGGGTGCTAAAGG TGATGCTAGTAGATTTTAGGTAAAGGTGCTCGCTGTTGTTCAAGCCTTAA TATTGTAACAGAGTATCAATTACTGTCTGCAGCTACATGTACATGTATGT GACAGATTGACAGAATATTGCTATTTTTGCTTCCAGTGGGTGTAAGAATG TGAAAAACATTGAAATAAAAGTAGTTTGTGAAAGTTATTAAGTACACATG TTGTACTGTGAATATTTCTCTTCTAATTTGGTATACTCAGGATTTATGTA CTTCAATACAGTCAGGTACATCCAATAACATTAAGTTGATAGCCAGGCAT GCATGTGCAAGGTTAATTGTATTGTATCAAAATCTATCGATGGCTAGAGG ATCAACAGACAGGATTTCACAGAATAAAAAACATTTATTTAAAAAAGTTA GTGCAAAATATACATCAAAGAACTATTTTGGTGAGACATTTGCATAGTGC TCTTGTTTAAAATATGTGCATCCTTTAAGTGCATTGAATAAAAACATCAT AAAATGTACTTTTAACTACCATTTACATCTGAATTCATTCCAGAACTCTG CTCTATATATACTTATATACTTCTCCACAAAATTTGCACAGATTGTCAAT ACATAGTTGCTAAAAATACCACACACAATTCAGAATTGAATTACTCTACA CAATCTTAGAAACTACATGTCCTAATATAATTACAAATCAAACAGATACA TCTATTCAATACAAGTGTCTGGCAATTACCACCTACATGTACCAAAATAC ACATTTTGTGCCTTTATCAATGTCAGAATATATACAGGATTTTGATGCCA GAAAATTGTACAGATTGCACCCAACAAGATTTGTTCTTAGATACATTGCT GTTAAAAGTTTAAAAAAGCTAGAAAAACATATACTGTAGAGTTCTGATGT CTTTGTAGGCAATAGTATATCTGAAATTTTTACCATATCATAAATCGTTG ATCTNTAGATACATTGCTGTTAAAAGTTTAAAAAAGCTAGAAAAACATAT ACTGTAGAGTTCTGATGTCTTTGTAGGCAATAGTGTATCTGAAATTTTTA CCATATCATAAACCATTGATCTATTAAAATAGTTTGTTTATGTTATGGTA GTGCTGACTCTAAGAAATGGAAAGGCACTGTAGAGATTTAGC

Coding sequence (CDS) from alignment at Sc0000179:422054..431345-

>Blg01157.2 ID=Blg01157.2|Name=Blg01157.2|organism=Branchiostoma lanceolatum|type=CDS|length=1035bp|location=Sequence derived from alignment at Sc0000179:422054..431345- (Branchiostoma lanceolatum)
ATGGCGTCCAACAAGGAGACTCACAGCCAACACATGGAGACCAACGCGAT
GACCCTGACCCGCTGGGTGCTCCAAGAGCAGCGCAAGCACCCGGGGGCGA
CCGGCGATCTCACCCAACTTCTCAACGCGATCTGTACGGCCATCAAGGCC
ATAAGTACCGCCGTCAGGAAGGCGGGAATCGCCAAACTGTATGGCATCTC
GGGAGACGTGAACGTAACCGGAGATGAGCAGAAGAAACTTGACGTCCTGT
CCGACGACCTGTTTGTCAACATGATGAAGGCATCCTTTATGACCTGCGTC
CTGGTCACAGAGGAGCGACCTAACGCCATAATTGTGGAACCGGAGAATCA
GGGCAAATACATCGTTTGCTTCGATCCTCTTGACGGGTCGTCCAACATCG
ACTGTCTGGGCTCCATAGGCTCCATCTTCTCCATCTACAGAAAGGACACG
GAAGGTGAACCCACAGCACAAGACGCCCTCCAGCCTGGTAACAGGATCGT
TGCCTCGGGGTACGCGCTGTACGGCAGCGCCACCATGATCGTCCTGGCCA
TCGGACACAACAGCGGCGTTCACGGCTTCATGTTAGATCCTTCAATCGGA
GAGTTCATTCTGTCTGAACCCAACATTCGCATCAAACCTCGGCATGAGAT
CTACAGCATCAACGAGGGCTACACGCAGTACTGGGACGAGGCAATCAAGG
AGTACGTCCAGAAGAAGAAGTTTCCAGAGACTGGGAAGCCATACGGATCA
CGTTACATCGGTTCCATGGTGGCCGACGTTCACCGGACTCTTGTTTACGG
AGGAATCTTCATGTACCCTGCACACAAGAAGGCGCCAAAGGGCAAGCTCC
GTCTGATGTACGAGTGTAACCCCATGGCATTCATCATCGAGCAGGCAGGA
GGCATCGCTACAACTGGGGAGGGGCGTGTTCTAGACGTGGTTCCCACGGA
CATCCACCAGCGCTGTCCTGTGTTCCTGGGGTCACCTGAGGACATCAAGG
AACTTCTAGAGATCATGGAAAAGCACAAGAAGTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg01157.2Blg01157.2-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg01157.2-exon-Sc0000179-1570713199:431154..431345Blg01157.2-exon-Sc0000179-1570713199:431154..431345Branchiostoma lanceolatumexon
Blg01157.2-exon-Sc0000179-1570713199:429806..429978Blg01157.2-exon-Sc0000179-1570713199:429806..429978Branchiostoma lanceolatumexon
Blg01157.2-exon-Sc0000179-1570713199:428188..428443Blg01157.2-exon-Sc0000179-1570713199:428188..428443Branchiostoma lanceolatumexon
Blg01157.2-exon-Sc0000179-1570713199:427296..427442Blg01157.2-exon-Sc0000179-1570713199:427296..427442Branchiostoma lanceolatumexon
Blg01157.2-exon-Sc0000179-1570713199:426576..426713Blg01157.2-exon-Sc0000179-1570713199:426576..426713Branchiostoma lanceolatumexon
Blg01157.2-exon-Sc0000179-1570713199:425728..425844Blg01157.2-exon-Sc0000179-1570713199:425728..425844Branchiostoma lanceolatumexon
Blg01157.2-exon-Sc0000179-1570713199:424978..425047Blg01157.2-exon-Sc0000179-1570713199:424978..425047Branchiostoma lanceolatumexon
Blg01157.2-exon-Sc0000179-1570713199:422054..424394Blg01157.2-exon-Sc0000179-1570713199:422054..424394Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000179genomeSc0000179:422054..431345 -
Properties
Property NameValue
GeneIDBlg01157