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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000179:422054..430268- Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >Blg01157.1 ID=Blg01157.1|Name=Blg01157.1|organism=Branchiostoma lanceolatum|type=mRNA|length=8215bp|location=Sequence derived from alignment at Sc0000179:422054..430268- (Branchiostoma lanceolatum)
AGACACGACTCGTGTTTTACTGGTATAGCCTTCCTGTTTTCTTGGAGCAG
ACGACAATGGTTCAGACCATATGGTAATCTCTACTCTTTGATTGGTCACA
GCTGGAGGCGTGGTCCTAATCAGCTGACACAGATCTGGCGCTGATTGGTC
AGATTTGGAGGTGTGTCACCCCGTATGGAAACAACAAAAAGAAACTTGCT
TGGTTAGTCAGCACTTTGACCGCGTTGGTAGTGAAAACAGTCGAGTTTTC
GCAGTTCTTACTAGACTTTCTAACTTCTTCTCATTCAAAGGAGACTCACA
GCCAACACATGGAGACCAACGCGATGACCCTGACCCGCTGGGTGCTCCAA
GAGCAGCGCAAGCACCCGGGGGCGACCGGCGATCTCACCCAACTTCTCAA
CGCGATCTGTACGGCCATCAAGGCCATAAGTACCGCCGTCAGGAAGGCGG
GAATCGCCAAACTGTAAGTAAAGTGTGCAATGACCAGGATCACGACCTTC
TACAGTGCTTATAGAAAGCTAGTAGAATGTACGCGCACTCCTAAATGACT
GCAAACTTTACAAAAGGACCTACGTGGCCGGATGAATGATCATGTTTGTA
CAGAACTTAGCCCGCCATTTTTTTCTTCCGGGGTGTTGCAATTTTCTTTA
ACGACCACATGTTTACTCCTATCCCACAACGTGCATATGATTTAAAAGGT
TGGTAGACTAGTAAATTTAAATGCGGCCAACGAAATCAAATCTGCCCTGA
TGGAGTCACAGACACTGAGACAGGACATCAGAAATCTGATCCCCTCGGAA
AACCGGTCTTTTTGCTGGCAACATTGTTTAATTAACCTTCTTTGAATTAC
AAGGAAGTACATTTTCAGTAAATGCCCCTAGCATTTCCGCAGCCATTCCC
TCCCCACTGTGCAAGTGTAGAGTCAGGTACAAAGTGCCATGATCGCTACG
TGCTGTTGGTAACGTCATCTTGTAACCTCATATCCACCTGGCCATAGTAC
GAGGTATGACCTTTGATCTTGCCCATGTTGTTTTATCCTTGTGGGATTTG
TGCGCCAATTTCCCAAGGGTCATTGACCTCCTGTGGTACCCAAAGGCCAT
TGACCAACTGTAGTACAAAAGGGGAGGGACCAGTAAATGGACTTTCCATT
GCAAAACATGGTTAAGCCATGCAAAAACAATCACTTTAAAATACATTTAC
CTACATTTCAAACCACAAATCTTTACTACTCCTGCAAAGCTGGTTCTTTT
GGGAAAGAAAGGAGGTCAATTCTGGCATTTTAACTAGCCACAGCCAGAAG
TTTTTAAGATCATGAGACCAGGATTTTACCCCCTGTATCTGCTTGATGAA
AAGTTGTTTGAGTTGAAAAAAATGGCCTTTAATTGTTCGGTCAGCAGTGA
ACAAAATCATTGAAGAAGAATGAATGAACTTAATTGCTGGACAGTTGTAC
ATGGTACAATGGATAGCAATAATCAATAACGAAGTAATCAACACGATATT
CTAAACACTATGGGAATATGGATTTCTGATATTCCAATGGATATTGTAAG
TCAAACATATCTACATCATCTGTTAGTTATTTGTAGCGTGTTATTGAAAT
GTTTTGCAAAAGTGCTGTTTATCAATGTTACCAGTTTTCCTCTTTTTGTT
CAGTTACCAGGGCTAACCCTTTGTAATAGCCTTTGGCTAGTTGTGTAGCC
CTGGCTGTACTTTTTTTACTGCCAAATAAATAGATCAAACCATTATTCCC
TTTTTTGTTGGTATCACTTCTTACCTATATATCCCAAGACTTTGGAAAAT
CTAAAGATCATGGTTATTCTCCCAGGTATGGCATCTCGGGAGACGTGAAC
GTAACCGGAGATGAGCAGAAGAAACTTGACGTCCTGTCCGACGACCTGTT
TGTCAACATGATGAAGGCATCCTTTATGACCTGCGTCCTGGTCACAGAGG
AGCGACCTAACGCCATAATTGTGGAACCGGAGAATCAGGGCAAATACATC
GTTTGCTTCGATCCTCTTGACGGGTCGTCCAACATCGACTGTCTGGGCTC
CATAGGCTCCATCTTCTCCATCTACAGAAAGGTACGTTCAGTGCCCATTA
CAGTACAAATGTAACGAGCAAAGTCGTTATATCGAACGGCGCCAGCTGTT
CAAACATAGAACAGCCGATCCCGTTCTCTCATTTGAATAAAGCAGTTGTT
TGCGAGAATTCCTCAAGCACAGACTGCGGTTGGGGGGAAAGAATGTAACG
AGCAAAGTCGTTATATCGAACGGGACCGGCCGTTTGACCATAGAACGGCC
GATCTTGTTCTCTCATTTGATTAAAGCAGTTGTTTGCGAGAATTCATCAA
GCACAGACGTGTCTTATTCTCTGACTTCTCACACAATGTCTGTTATTTGA
TATCACAAGTGATGAATTACTGGAGAATGCATAGGACTTTGAAGCGCTCA
TTTTATGAGATGTGATTGACATTGATTGATTGATTGATTGACATGTCCTG
TTTGTGTCAATTTACTTCTAATTCTTCTTGCATTCATGGATCTAATGTGA
CAATGTTATTCTAGATGTTCATGATGTCTATCCTGCTGGCATTTGCCGTG
TAATAATAATATCAAGGAGGTTCTTTCTGAAATACAACCTCCTTCAATTT
TGAATAGAATTTCCTTGGTAATATTTACTCTTACATGTCCGCTATTAGAC
CAAATCTCAGAATTCTGCTTGCCTGTCAGGGGCTCCCTTGGAAATCAGCC
TTATTTAGCTAAATGGTCTACCTGCATGTATCCAAGACTAATAAGAATAA
AAAGGAAATTCTAACTTTCCATCTAGGACACGGAAGGTGAACCCACAGCA
CAAGACGCCCTCCAGCCTGGTAACAGGATCGTTGCCTCGGGGTACGCGCT
GTACGGCAGCGCCACCATGATCGTCCTGGCCATCGGACACAACAGCGGCG
TTCACGGCTTCATGTTAGATCCTGTAAGTATATATAGAGTTGTCTCATGG
TGTCGTGTTAGACCCTGTAAGTGTACAGTTGTGTTCATAGTTTCATGTTA
GATCATGTAACTGTACTAGTAGAGTTGTTGCAGAATACAAAAATTACTCA
AGTAACTGGACAGATGTCAACGGTAAGTTGTTTCAGGTAGCATCCACTAC
CTTTCATGATCATCAGTGACTGACAAAAGATAGACTGGTAGATGCTACCT
GAAACGTGCAACCATTGCTGGTTGCTAGTTACATGTACTTGAGTAACTTT
TGTATTGTATTTGCTATCTTATTATTTTGATTTCTTACCTTTATTGATGT
GGAGTTGTTGCTTTCCCTGGTAATTCTTGAATAGATCATCTGATGGTATT
TTGTTTCTGTCAGTGAATAATGAAATTTGGTTTTAGCGTTTTTTTTATTT
CTATACACATGCAAAATATTGTACTGTTATGTTCACTGCAAGATTGTTGT
ATTCTCCCCCAGAGCATAGAATTTACCTGTGCCACACAGCAAATACATGT
GAATGTCAAACAAAGTTATGACAGTTAATGACTATTCTATTCCTCTTACT
TGTAGTCAATCGGAGAGTTCATTCTGTCTGAACCCAACATTCGCATCAAA
CCTCGGCATGAGATCTACAGCATCAACGAGGGCTACACGCAGTACTGGGA
CGAGGCAATCAAGGAGTACGTCCAGAAGAAGAAGTTTCCAGAGGTCAGCA
ATTTGTACATATCAGTAGCCTGTGTTTACACAAGCTCTCAGCCGGAGGTT
ACTGACCCCCACCCCAAGAGCTTGTGGCACAATACGTCTAAGCCGTGAAG
TCCAAGTCTAGGGGGATGGCGGTTACAGGACCGGCTGGCCGCTAGGAGCG
CTATACATATCAGCTACTAATGATTTTGATTTAGAAATGATTTGAATGAA
CATGTAGAGATAATTGATTGTCACCAATGTGCATGTAAGCTCGTCAATTT
AGTAACATTACATTATGTACACTGTATTGCCCAATATTGCAGCTACAACA
TCCTTGCAGTTCTATGACCAAAGTCATCATTGTTCATCATGATTTCAGTG
ATTGAAATATTGATCAGTTATCAGTAATGAATGCAACTTACCTTGTAAGG
AAAACAAAAATACAGAGCAACAAGTGATTTTATGATAACTTCATTGATGT
GAATGGGTAAAAATATGTTAAGATGTCTTTTAAATGTGGCATAAGTTGTG
TTCTAGCTATCTATAGTATCGGCCATCGGCCGAGACTAAACAAGTTCTTA
CATCACTCCATATTGCCCTATCCAACATCATTTGTCCTAAGTGTTCATAT
GCAATCCCAGTGTCTCTAACGTTAACTAAACTATCCGTAAAAGTTGTAAG
TTGTGTTAACTGAAAAAGGTTGATGACTTGTGATATGCTGTTTTGAAATG
ATTGGTGAATTCTTCTCTCTTTAGACTGGGAAGCCATACGGATCACGTTA
CATCGGTTCCATGGTGGCCGACGTTCACCGGACTCTTGTTTACGGAGGAA
TCTTCATGTACCCTGCACACAAGAAGGCGCCAAAGGGCAAGGTGAAGATA
TATGGAGTCTTAACTTCTTTAAAAGACTGTTTAGTTTCCTTCTTGGACCT
TTTTTTTTATTTTTTATTTTTTACCGAACTCGCTCAGTGCAAGGCCGTAG
AGGGCCACTCATCAAAGCACTGAACTAATTCTTACTGTAGCAGCATCTCT
TCACCCTAGGTCAGAAACAAGCATGACTTCACTGACCCATTAGGAGAAGC
AGGGGTTACGAAGGCTGCTCGGGAAATTCCCTACCCCATTTAGGCTGGAA
TGTTTTGATCCACTCACACGGGGCATGCCTCTACTCTTTTTCGAAAGATG
TGGTGGGTTCTTTTACGTGCTCAAGGTGTGACTCTCCTCAAACACGGAAC
CTCCATTTAACGTCCTATCCGAGGGAATTATTATTATAATAGTAAGTGAG
TCAAACACTCACTCTTGGGTTTGACTGTGTCAATCCATATTGATGATTTC
AGCTATTAGCAAGTCCTGGAAAAAGTGAACATGTTTCACAACATACAATC
AAGACGTTTTTCATGTTCTAGTGTTATCATTTGGTAAAACCAGACCAAAG
ACCAGATGACTGTCTTGTTAGAACCTTGACAGAAGTAATTGTTGCTATCA
ACTTTCGCACATTTGTAATGAAGGAAATCAGCTACTGTTGAAATACAATA
ACTTTTTGTTTGTTTTTGCAGCTCCGTCTGATGTACGAGTGTAACCCCAT
GGCATTCATCATCGAGCAGGCAGGAGGCATCGCTACAACTGGTAAGTTCT
TCAGACTCCTGGAAGTTGGAACCCAAGCAAAGTGCTAATTGTGCTTGCCA
TTGTAGCTTTTTTTGCACCAAATTTGTATTGGTTTGTGAGTTAGTCATTA
GGGAGGAGTTTAAGAAAATATTTTGAAAAGGGTATGCTCCACTGGAAGCC
AAATCTGTACTAGGATAGTCAGGTTTGTTCAGACCCTTGTAGTGCATAGT
GGCACATAGGGCAGCAAGTTTCCTTGCTGTTTCAGTAGCAGGGAGGGGTT
GCTAGCTCTTCCCCTTGAAGTTTAATGTGCTCAAGGCACCTCCTTAAACA
CAGGACCCTCATTTGTGTCCCTTCCGAAAGACGGGTGCAGTCCCAACCGA
GATGTCCTGACCCCGGGATTTGACTTGGGGCCTCCAAGTTCCCAACTAAT
TGGAACCAGAAGCTCAACTGTGAGGCTGCTACCAGTTGTGTCACACAGGG
ATATCCCTAAAAGGCTTGGATAGTCAGATTGAATACCTTCAAAATGTTTG
TTTATGAAATGTTACTTATGATATATGTATCCTGGTTTCATGTGTCTAAC
ATATAAACCCTGCCCACTGTGTAGGGGAGGGGCGTGTTCTAGACGTGGTT
CCCACGGACATCCACCAGCGCTGTCCTGTGTTCCTGGGGTCACCTGAGGA
CATCAAGGAACTTCTAGAGATCATGGAAAAGCACAAGAAGTAAGGAGGTC
GCTACCACAACGCGGGAACATCCGAAGACAAGATGTGTTGTCAAATGGAG
ATTATCATTAACTAGACCCTATGGAGCAAATGTACTGAATCTGGTTGTTG
TGGGAAATGACAAAATTTACTCATTGATAAATAAGATATATTTTTCTCAT
CTCCTTCACTCTTATCATATTGTAATCCAACCTCATATATAGTTACCTAC
ATGTACATGTCAATTTGGTCCTCTTTACTGTTCTGTAACTAAAATTTGGA
TTCAGCTTTTACAAACTTTCATTTTAGTAACTTTCATAAGCAAAGAAAGC
TTCCTCGCAAAGGAATGTGTATTTGCTAATTGCTTAAACCTTCTTTTATA
AATACATGACATTTGGTGTAAGGGATGCTTAATGTGTTACATGGTGCCTC
TTGTTTACTAGATAGACAGTAACTGGATGAGTAGGGTCCTGGTAGAAAAC
TTGTGAACTGTGACAATAGAAGGCAAGCATTCCATTCTGAAGCAGTGCTA
AGTTAATGTGATACTGCTGCTGCTATAGAGTACAGAATGCAAAGATCATA
TCTAATTTTAAAGGCATCCAGAGCATTTTATGAGGCTTGAAACTGGAAAT
ATTCTAGTTGCTGTAATCTTTATGAAATTGACGTTTAATGCCACTGTTTA
CCACATTTGTGTGCGGATTTCTTGTCAAAAGTGCTCAAAATCGGCACAAA
AACAAGCTATACATGGTGATCTTTTAGTTTCAAGCGCCTAGTGTAAATAG
ACCGATACCATAGCCCCGCCCACCTGTCAAAACGTAGAAATGCAAAATTA
AAACATATTATATAAACAACGCAAATATTTGATGGACATGCAGTCACTCT
CTCTTTGGTCGAACCGCTAATTGTGATGAACAGTCAGGATCAGTCTATTA
GGGCTTGGATTTTCTATCAGTTCTCACCACACAACGACATCGTATCTTTG
CTCCTTTAATGTCGATATGTAATGGTATAGTGTTATTGAAACTTACTATG
TGTAGGAATGACTACACATTGGAGTTTTTTTATTCAAGCTTCAAGCGTCA
TAAAATGCTCTGGGTGCTAAAGGTGATGCTAGTAGATTTTAGGTAAAGGT
GCTCGCTGTTGTTCAAGCCTTAATATTGTAACAGAGTATCAATTACTGTC
TGCAGCTACATGTACATGTATGTGACAGATTGACAGAATATTGCTATTTT
TGCTTCCAGTGGGTGTAAGAATGTGAAAAACATTGAAATAAAAGTAGTTT
GTGAAAGTTATTAAGTACACATGTTGTACTGTGAATATTTCTCTTCTAAT
TTGGTATACTCAGGATTTATGTACTTCAATACAGTCAGGTACATCCAATA
ACATTAAGTTGATAGCCAGGCATGCATGTGCAAGGTTAATTGTATTGTAT
CAAAATCTATCGATGGCTAGAGGATCAACAGACAGGATTTCACAGAATAA
AAAACATTTATTTAAAAAAGTTAGTGCAAAATATACATCAAAGAACTATT
TTGGTGAGACATTTGCATAGTGCTCTTGTTTAAAATATGTGCATCCTTTA
AGTGCATTGAATAAAAACATCATAAAATGTACTTTTAACTACCATTTACA
TCTGAATTCATTCCAGAACTCTGCTCTATATATACTTATATACTTCTCCA
CAAAATTTGCACAGATTGTCAATACATAGTTGCTAAAAATACCACACACA
ATTCAGAATTGAATTACTCTACACAATCTTAGAAACTACATGTCCTAATA
TAATTACAAATCAAACAGATACATCTATTCAATACAAGTGTCTGGCAATT
ACCACCTACATGTACCAAAATACACATTTTGTGCCTTTATCAATGTCAGA
ATATATACAGGATTTTGATGCCAGAAAATTGTACAGATTGCACCCAACAA
GATTTGTTCTTAGATACATTGCTGTTAAAAGTTTAAAAAAGCTAGAAAAA
CATATACTGTAGAGTTCTGATGTCTTTGTAGGCAATAGTATATCTGAAAT
TTTTACCATATCATAAATCGTTGATCTNTAGATACATTGCTGTTAAAAGT
TTAAAAAAGCTAGAAAAACATATACTGTAGAGTTCTGATGTCTTTGTAGG
CAATAGTGTATCTGAAATTTTTACCATATCATAAACCATTGATCTATTAA
AATAGTTTGTTTATGTTATGGTAGTGCTGACTCTAAGAAATGGAAAGGCA
CTGTAGAGATTTAGC Coding sequence (CDS) from alignment at Sc0000179:422054..430268- >Blg01157.1 ID=Blg01157.1|Name=Blg01157.1|organism=Branchiostoma lanceolatum|type=CDS|length=1002bp|location=Sequence derived from alignment at Sc0000179:422054..430268- (Branchiostoma lanceolatum)
ATGGAGACCAACGCGATGACCCTGACCCGCTGGGTGCTCCAAGAGCAGCG
CAAGCACCCGGGGGCGACCGGCGATCTCACCCAACTTCTCAACGCGATCT
GTACGGCCATCAAGGCCATAAGTACCGCCGTCAGGAAGGCGGGAATCGCC
AAACTGTATGGCATCTCGGGAGACGTGAACGTAACCGGAGATGAGCAGAA
GAAACTTGACGTCCTGTCCGACGACCTGTTTGTCAACATGATGAAGGCAT
CCTTTATGACCTGCGTCCTGGTCACAGAGGAGCGACCTAACGCCATAATT
GTGGAACCGGAGAATCAGGGCAAATACATCGTTTGCTTCGATCCTCTTGA
CGGGTCGTCCAACATCGACTGTCTGGGCTCCATAGGCTCCATCTTCTCCA
TCTACAGAAAGGACACGGAAGGTGAACCCACAGCACAAGACGCCCTCCAG
CCTGGTAACAGGATCGTTGCCTCGGGGTACGCGCTGTACGGCAGCGCCAC
CATGATCGTCCTGGCCATCGGACACAACAGCGGCGTTCACGGCTTCATGT
TAGATCCTTCAATCGGAGAGTTCATTCTGTCTGAACCCAACATTCGCATC
AAACCTCGGCATGAGATCTACAGCATCAACGAGGGCTACACGCAGTACTG
GGACGAGGCAATCAAGGAGTACGTCCAGAAGAAGAAGTTTCCAGAGACTG
GGAAGCCATACGGATCACGTTACATCGGTTCCATGGTGGCCGACGTTCAC
CGGACTCTTGTTTACGGAGGAATCTTCATGTACCCTGCACACAAGAAGGC
GCCAAAGGGCAAGCTCCGTCTGATGTACGAGTGTAACCCCATGGCATTCA
TCATCGAGCAGGCAGGAGGCATCGCTACAACTGGGGAGGGGCGTGTTCTA
GACGTGGTTCCCACGGACATCCACCAGCGCTGTCCTGTGTTCCTGGGGTC
ACCTGAGGACATCAAGGAACTTCTAGAGATCATGGAAAAGCACAAGAAGT
AA
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg01157.1-exon-Sc0000179-1570713199:430109..430268 | Blg01157.1-exon-Sc0000179-1570713199:430109..430268 | Branchiostoma lanceolatum | exon |
| Blg01157.1-exon-Sc0000179-1570713199:429806..429967 | Blg01157.1-exon-Sc0000179-1570713199:429806..429967 | Branchiostoma lanceolatum | exon |
| Blg01157.1-exon-Sc0000179-1570713199:428188..428443 | Blg01157.1-exon-Sc0000179-1570713199:428188..428443 | Branchiostoma lanceolatum | exon |
| Blg01157.1-exon-Sc0000179-1570713199:427296..427442 | Blg01157.1-exon-Sc0000179-1570713199:427296..427442 | Branchiostoma lanceolatum | exon |
| Blg01157.1-exon-Sc0000179-1570713199:426576..426713 | Blg01157.1-exon-Sc0000179-1570713199:426576..426713 | Branchiostoma lanceolatum | exon |
| Blg01157.1-exon-Sc0000179-1570713199:425728..425844 | Blg01157.1-exon-Sc0000179-1570713199:425728..425844 | Branchiostoma lanceolatum | exon |
| Blg01157.1-exon-Sc0000179-1570713199:424978..425047 | Blg01157.1-exon-Sc0000179-1570713199:424978..425047 | Branchiostoma lanceolatum | exon |
| Blg01157.1-exon-Sc0000179-1570713199:422054..424394 | Blg01157.1-exon-Sc0000179-1570713199:422054..424394 | Branchiostoma lanceolatum | exon |
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000179 | genome | Sc0000179:422054..430268 - |
Properties
| Property Name | Value |
|---|
| GeneID | Blg01157 |
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