Blg01086.6 (mRNA) - B. lanceolatum

Overview
NameBlg01086.6
Unique NameBlg01086.6
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000003:8446818..8456079+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg01086.6 ID=Blg01086.6|Name=Blg01086.6|organism=Branchiostoma lanceolatum|type=mRNA|length=9262bp|location=Sequence derived from alignment at Sc0000003:8446818..8456079+ (Branchiostoma lanceolatum)
GTTAGAGTTATAAACGTTCCTCATAATCACTTTCACTATCGTTAGCGATA ATCCAACATATTTCGACAGTCATGAGACATCAGGTTAGAGGTCATAGGTG AAAGGTCTTCCTGAGAAAATTTGGCGCGGGTATATTGCCGGGGAAAAAAG TCAAGAAAATCTCTTGTTTCTGCTCTATAGGCGTTTGTTTTCGGTGATTA TTTTGTTAGAGCTGTAAATAAAAACTATTTTCTCTAGCAATGGCTGGTAA CTTTTGGCAGAGCTCGCATTGGTAAGTTGTAATGTTTTATTTGATTTTGA GGGGGGGGGGCATTGGCTAACTTTACTGTTTTTCATTGTTGTTAGTCTGG AATGAATACAGGAAATTGAATCATAGACCAATGTCTTAAGTAATTTACAC CTTCTTTTCCATCACCAAGAAGGTGTTTTCGGGATTGTGTGTTTGTTTGT TTGTGAACAGCATGACTGGAGAAGTTAAGTGGATGGATCTTTATGATATT TTTGGCATGTTGGTGGGTGTTGGCATGAAGAAAAAATTATGAGTAGATTA TGGGTTACCATAGCGAATTTCCGTGGTACCGCAGCAGTACTTCAGGTTTT GGTGTGTCTTGTTCTGAACATCCTATGGTCATGATTTTTGTGTTGTAGAT AGCTCTTGTGCTCAGGAAGAAGTGACATAAGTTTGTGTCCCTATCAGCTT CCTTTGGAACTGCAGGGGCATTTTAGCTGCAGACTTTGAAACAGGATAAA TCAAGAAGGGATGAATAAATCTTCGTCTGTTGTTGTTTTGTAGTCAACAG TGGATCCTGGACAAACAAGATCTCCTCCGTGACCGGCAAGACGACTTGAC CAACTTTCCCGACGATGAATACCAGAAAGTCCACATCTTCTACTGTGGTG GTAAGACACCACAGTTCTCTATAGATAAACCATCATTCTATTTCAACCGT GAGAAACTCGAAACAATGCTATGAATCTTATTGTTCTTATTGTATACTTT CTAGATGCTGTTTACAAACTACATACTGCATAAATTGTGAAAGATTCACG GTGGTTTAATGCGTTTTAACTATTTATTGGAATGCACTGGAATACACATA CTAGTAACGAAAGGTGAAATACCAAAGTACAGTATGCTTAGAGAAGTTAG GGTTACGATTAACTCAAAGTCTAAACAATTTTATGTTTACATTTGGAATG GTCATGTGTGCTAATTATTCATACCCGGCTAAACAAACATTGTAGTCAGT AAATGAAGATAAACATGGTGATGGGCCAGTATCAACTATAAAGATGAGTG AGAGTTCTATAACATTTCATTTTCTTTATTGTATAGATATGATATAAATG TAACCACTTTTTTTCAGTAATCCAGGCAGTCGGAGAACAGTTGAAACTTA GACAACAAGTCATCGCTACGGCAACAGTTTACTTCAAAAGATTTTATTCC AAGTGAGTACTCATACTCCTAACCATATCACATCTTGATTGTATAAGTAT ATGCAGGTTTCGCATATCATTTCTGTAAGTTTATATTTTCATAATTTTTT TAATTTTTGACAAAAGGCAATCTATACCCAGCTGTAGTATCAAAAGACAG CCCACACCTGGAAGAGTTTATGTGTACTTTTTGCCTGTTATTATATGAGG TAAAAGTTGTATTAGCTGGTTCATGGTTTAAACTGTACGTGTACAGGATG ATGCATTGTGGGTAATATGTCAAAGGTGAAGGCCCCTGAGATTTAAACAA AACACATCTGGATATGTAGCCAGCATGGTCTAGACAAGAACTGTTTACAA GTTCTGTATCTGTATAGCTGGTATAACTGCCCTTCGGCGTAACACACCAG CTTCATAACATACCATCTTGATGTGTAAACACAGTTTAAACTGTGAATCG CTTCATTGTACACATATCTGCTGTTCCAGGTACTCCTTTAGAACAATAGA CCCACTATTGATGGGACCTACCTGTGTGTTCCTGGCATCTAAAGTAGAGG TGAGATTTGTTACCCTTTCAATTATGTTTCAAACATGTTGAATACTTTGG AAGTTGGACTTATTGTTTAGCTGCTGCTTGCAAGTTGTTTTATTGAACAA CTGTTTGTGTTTCCTACATTTCAGGAATTTGGTGTCATATCAAACAGTAG ACTTATAACAGCCTGCCAGACTGTCAGTAAGTACCTTAATTGTGTCTTCA TGTTTATTCACAATTTTTGGCAACACCTCGTGTGCAGAAGTCTTTAATCT GACTCTAGCCTACTGTTTTTGTAACAGCACTATTTTTCTAAATAGACAAC TTCAGCAATACTGTACACAAGACTTGAACAACTTGATTTTTGCAATCTTA AGATATCTTTGTCTTAAGAATTGCCAATTGTTTCCCTTCCATTGCAGTAA AGAACAAGTTCTCCTATGCCTTCAACCAGGAATTTCCTTACAGAATAAAC CATGTAAGTTCCCACTTCTATATGCATTCTAGAGGTCAAAGTTTATGTTA ACCTTTAGATGAGTAGTGAAAAAGAAGATTCATTTTCTGTTAAATGTTAT GAAGTATAAGCTACGTATCAAAGCTATATAATTATAGTGTCATTTTTCAG TAACAACTGCTATTGACAGAGAACTCCATGATGATGTATTGAATCTTTGA TTTGATATGTTAGAGTTACCCTTTTGAGTGTCAGTATTTATCTAAAGTAT GCGATATGATTTTTTCAGGTACTAGAATGTGAATTCTACCTATTAGAAAT GATGGTGAGTTACAGTCTTGTTATATTTGTCACATGTGAGAGAAAGAGCA AACTTGAGAAAGAGATATGAAAAAAGAGGAAAAATAGATGAAAAGAGGGA GCGAAATGGGAGGAGGAAGGGAGGAGCAGAGAAAAAAAGGAGAGTTTAAC TTTATGTTTACATCTATGTATGTGACAGTATGTCCTTCATAACTTTCATG AATTATGGGAATCTTATATTGAAAACTCTCACCATGACATATTGGCAACA AGATGTCTACCGCTCCAATTTGGTGAGAAAAAACAGATGTTCTGCTACAG TACTGTAATTATTGTTTCTTTCACTGTAACTTTAAGTTCACTGTTTTCAC TGTCACCTCTGTACCGTGAACTTATCATCACCGTGAAAAACCTATTTATG ATTTCTCCACACATCCTTTCTGTAAATCAGTTTCTACCACCGTGAAGTTA AAGTTCAGTGAAAATGTCAATTTTTGTTACACAGTGAAATTTTGCTACCG TGAACTTAAAGTGATTTACAGTATCATACCAGTAACGAGCGACTAGGGGG CCCCAAATCTATTCATTTCGAGGTCTCATCAAGACCTACCCACCGACCAA ATATGGCGACAATCCTTCCAGGCATTCTCGAGTTATCGTGTTCACAGGCA GACCAACACACACAAGCGCTACCCAAAGCATAGCCTTCTGGCGAAGGTAA TAAGGTCTTTATTTCTCGAACAGGATTGCTGCTTGGTGGTGTACCACCCC TACCGACCTCTGACCTCATATGTACAGGACATGGGACAGGAGGACACAGT CTTACCTCTGGCATGGTGGGTACTAAACAGCCAAATTTGTGCCTAAACAG GCCTAACTTTTGAAGTCTTAAAGCAAGCAAGCAGTATTAGGGTCTGAAAA ATCAGATTTTGAAAGGCAATTTATTTAGTCATTTCTATACATGTTTAGTT CAAACAACACCATTACAATATCCTTGATGCAAAGATATGACGTTGTTATG ATGTGAGAACTCATTGAAAATTGTGGCTGGAGTTTTTGTAGGCTCGCGAA ACTAAGGGGATCATTGTACGGCAGATTTTGCGCCATTTTAAAGCCCTAAA ACTATGAAGTCATATATGCAAGTGTGCTAAACAATGTTAGTAAATGTCAC TACTATAAAGATTTCACCTTTTTTTTATTTCAATTTTTTGGCCCTAATAT TGCATCAATGAAAGAGACAGTAATCAGACACATCTAGTACAAATAGAATA ACTTTGTTATTGATTATGTATAATTAGAAGCCAAGACACCCCATTTTCCA AACACATGTCTACCTACATGTACATGTGTAAGTGTTAACAAGTCTTATCA CTTTTTCTGCTATTGTTTTCAGGCGAATAGTAAATGACAGTTATCGAACA GATGTTTGTCTACTGTATCCTCCTTTCATGATCGCACTAGGTAAGTTGTC TTTTACAGTGTTACTGTGATTACTGATTGATAGTTACTGTAGCTAGCTGA TTCATTAGATGTTTAGTTTAGACAGTAGCTTGTTGCATACAGGGCACGTT GGCGCTGTTGTAAAGTTCACTATGACATACACAAGGGGACTTACCACAAG GAAGCATACTGGGCCCACTACTACATACATGTAAATCATAAATGTACAAT GTATGTGAATTGTTGTGTGTTTCACATTTTGCCACAGATGAAGTTTTAGT AATGTAAAGTTTTTTATGAGGTGTGAATATGATTCATGTCTATTTTGTGA CCAGAATTTTTTTTATATGATGAAACATTTATTTTCCTGGCCAATCAGCT TGTTGTGTAATCTGTCAGAAATTTGTTGTGTTCGAATTTGAAGCCATGTT CCCTCTAAATAGTTCTAAGGAGGTTAACAAGAGAAGGCCTTTTCTTTTAA AGCTCCTTGATAGTACCAAGCACTAAATTGAGTTTATCTCTTCATGTAGC TGCCCTGCACATGGCATGTGTCATCCTACAGAAAGATGCAAAACACTGGT TTGCAGAGTTGTCAGTTGATATGGAAAAGGTGGGTGTCTGTAGATTTGTT TTAGATTTTGTATAATTCATTTCCATTGTGTGCCCCCCACCCCTTGTCCT TGGTTTTTACATTAATTTTTTTTTTTTTTTTTCGTGGGGACTTAATTTCG CAGCAGGAGGAGAAAGGAGTTATACACAGTGTTTCAAGTTTGCGGTTGTA ACAATTCCGTGGTACAGTAGTAATAAATTTGGAAACGTATGTTTGCAGTG TCTTCATTTCACAGTGGAGAGGTCACCAGGAAAACTGTTAAACAAAACCA CTGCAAACATCATTAGAGTTACAGTACCTCATTGAAGAGGAGGTTGTTTT CCATGGCTTTGTGTTTGTATGAACAAAATATAATACCAATGATAATGAGT GGTTTTATGGCTATAATACTGTAAATCACTGTAGTATAGCGTCAAGAAAA TATAGTGGTTGAGGGAAAATTGAATACATGTAGGTCACGGCACTTGATTT AGGTACTCATTTACACCTGAGTCGAGTAAGGAAATTGGTAAGGGTACAAC ATCGGGACCTGTCAGGGATTCAAACTAAGTACCTCCAGATTCTGAGTCAA CAGCCCTAACCACAAGGCCACTTTGCCACATAACGATGGTACAGGTCCTG GAGAAAAAGTTTCTTCAAACCCATCTGGTTGCCTTTTGTTGAAACTTGAA TGCAGGGTCATCAGCAACTCTGAGTGGCTTGAATTCAAACTAATGACAGT TACTGTGCTTTGAATGGCAGAATGATATCACTGTTACCAACCTAATGAAA CTATTCATGGATGACATATTTCACTGTTCCCAAGGATGCTACTATCATAC ATCAAAATATTGGAATCCTTTTGTTTGCATGGATATCAGTGGCTTGAATT CAAACTAATGACAGTTACTGTGCTTTGAATGGCAGAATGATATCGCTGTT ACCAACCTAATGAAACTATTCATGGATGACATATTTCACTGTTCCCAAGG ATGCTACTATCGTACATCAAAATATTGGAATCCTTTTGTTTGCATGGATA TCAGTGAGGTATTCATTTTGTCTTTCATGCTGCTCTTAGAGTACAATTAT AGCTAATTAACGTCATCACAGAATATTGTTGTATATTTCCTGCTCATGTC ATAAGTTTGCAATGTTATCCATGGTAACAACCCATCCTGTCAGAAGCATT GTAATCTTTTGAAGACCTAAGACATTGCCCACGTCAAAGTATATTCAAAA TATTATGCTGTGTTCCCCATGGTAACGGCCTACGTAAGTCTCACTGAGCG ACTGCTGTTGTGACGTTTTTCGGTCTAACACGGAATCAAAACCGTCGCGA TTAGGTGCAGCTGCATTATCCTTCTTGCCTTCTAGTCAGGCCAAAGTCGT CCACAGTTGAGGAATCTCAAAAGACCAGAATCAGCTCCAGCATGTTCAAC AACAGCTCCAACCTATGGATGCTGGCTGAGGAGACATTTGCTCCTGACTT TGCAAACCTAGTGTCCTGCTACAAGTTTCATCTACGGAACAATACTGCAT CCATCGCACAAGCCAGCGAAGCCTGTTCCATGCACGAGGACCTTGTGAGA CTGAGAACAGGGACTGACATTGTCTATTGGCTGATGGGACTTCTCATCAT CATCAGTAATGCTGTCGTGCTCTTGGGAATCATTGGAACAAGAGAACTCC ACAGACCCGTCTACTTCTACCTGGCAAATCTGGCAATCACAGATGTTTTC GCAGGCATCGGACTTCTGTATCGTACATTCGGCCATGTAGGACACAGTGT AATGTATGACTTTCTAATGACTTATATCAACTCAATCATATTTGCTCAGA TGACTTCAGCATCAGCTCTATCTCTATTGTCTGTTAACTCCTATGTTGCT GTAAAGCATCCTATATACTTCCATGTCCATGCCGACAACGCCAAACTCCT TGCAGGTGTAGCTATGTTTGTTTCATGGATTGTTTTCTCCTTGCTTGCCT TCTCACCCAGTATGGGCTGGAATTGTCTTCATATGCAGACCTTTACCACT GGTATCTGCGTTTCATACTTCCCCCTAGCCTTTGTCATCACATGTGCATC CATACTGTTCTTGTTGTGCATAGTCATGATGTTCACAAATATAAGTATAT TCGTAGCTATCAGAGAACGAGAGAACAGAAGGCTTGAACAGGCTATAGCT AGTGCCCACCAGGCATCAGGAGAAAATAGTTCTGGGCAAAACAATGCTGC ACAAGAGGAGGCAAACAGAAAGTTTGAAGAAAGGGTGTACAAGGCCAGGA CTGTAATGATTCATGTGGTAGTGTCTTTTCTCTTCTGGCTGTTTCCCCTC CTGTTAGTGGCGTTGTGTAGGTTTAGCCCAGATATGTGCCCTCTTAGAAA CGGAATGTTCGCAGGTTTTTCTCTGAACTCATTCATTAATCCATTGGCAA CGCTCATCCGCACAGCAGACATAAGGAACGCAATCTGGCAAAGACTGACA GGCGTCCGTCAGACACTTGTCACCGTGATACGGGGAAACCGTGTGAATCC ACAGGAAGACCAAGCTGGAACAGGAGATGCCCCAAATCTACAGGAAGGTC CTGCACATGGAGACGGACAAAACACACCGCGTCCGGGCTCCAGACGAACA GCCCGCAGTGGGAAACCGACACTACATCATCCATGATGCCCTTGGAATGG GAGAGCCAGAAAGATCTCGCAGAGGGCGACAAACCGAAGATCTCGGCATA GTAGAAGTAGGCTGAAATGAACGTGTCCAGAAGTGCTACACAAAAAATGA ACTGTAGAAACTTACTGCCAAAACTTCACCGGTATATACAACAATCCTTA CTGTTATGTATTATATGGATTACCTTGAATCTGACTGTCACCTTAGATCT CATTATAAATAAAGACTTGTTGAATCTCCTACCACAGTTGTGTTGTAACC TCGTCGACAAGAAAAAATGAATACAAATTATGTAAATGTCGCCCTGATTT GCGTGATTTATGTCTGATAATTTTCACCTTTATAATTTTCACCTTTACCC AGCTCCCTAATGCCCCAAGTATGAAATTGCCATCATTTACCACTTTGGGA TTATTAGATTAGAAAAAAAATGTAGGAACAAGGTTGAGCAGTCACACACT GAAAGGTTGAAGAGTGGCTGGAATTGCGGGAAGTTCTACTTTGGAAGTTC CAAGGGGGTAATGTAAAGAAAAAGAAGAATTATGTAAAATGAGCCCTAGC CTGGTTTGCATGAGACATGTACATGTCTAATAATTTTCACCTTTACTTAC TGCTAAATAGTATGAAATTTACCACTAGAGTCCATTCCAAGTCACCAAGA GGGTTGTTATTGTCATAATTTACAAATGTTTTCAATCTGTTGTTATTATT TGTGTGAGAGATTTTATACTTTAGAAATATTTTGAATGTGATTTCAACTT TATAAATATTCCTCCGGTTTTCTAAAACTTTATAAATATTCCTCATGTGG AATATGATATTTCTAACAGTTTCTAAATAATGGTAACAGCATTCTACCAT TATTTACAATTCTTTACAATTTCTAACCATGTTCTACCATTATTTGTAAC ATCTTTATAAATAGGTCAGAGGGCTGTGAAGAAAGCAATTCACACATCAT TACGAAGTATAGGGAAGAATGCTCTCCGCAAAGGACCCAACAGTGTCCTG CAGTGAAATCTAAAGATATACAAAAGCAGACAGAAGGGCTGGATTAGCAC CTACATTTATGGGGGCAATCACCCTTCTACCATTATCTACCATTTCCTAC CATTTTTTGTAAATATTTCTAAACCTAAAAGAATCAAGTAGATGTTTAGA AATTATTCAAAATAAAGAGATTTTTGTGCAGTAACTTTCAAAATGTTTAT AAACTATCTAACTGAATTTGAATAAATTCAAATTTCCATATTCAATCTTT TAGAAAAATTTAGAAGTATTGTTGCTCAGATATTCTTTTATTAGAAATGA TTCAAAAGTATTACAAATATCATTCAAAAACCCTCTTGGTGTCTTGGAAT GGACTCTATGGAATTATTAGATAAATAAAACAAATTATAGTATTTTCTCA TTTCTCATTTATTATGCAAGTAAAGTGTACAGTGCACGATTTTTTAGTCT GTACACTTGAAAAAGGCGACATGCCGAAATTTGAACCGGTCGTGGTAATA GGCTGAATAAATGTTCTTAACAGGAACTATGCAGCTCCAGAAGTCTTGCT GAGGGATGACTGCGGTGTAAAAGATGCCGGTTAGCTGGAGGAATGAATCT ACTCTACTTTATACAGGAACGATCCCTTGATAGTGTTTTCACCATGAGTT CTTCCCCACAGATGTTAGAGATCACGCGCGTCATCCTGCGGCTGTACGAC CTGTGGAAACAGTACGATGAGAGGAAGGAGATCCTCAGTCTGCTCAGTAA GATGCCCAAAGCCAGAATTGCTCAGCCTGGGTGAGTATTTACCTGTTCAG TACATACAATAT

Coding sequence (CDS) from alignment at Sc0000003:8446818..8456079+

>Blg01086.6 ID=Blg01086.6|Name=Blg01086.6|organism=Branchiostoma lanceolatum|type=CDS|length=801bp|location=Sequence derived from alignment at Sc0000003:8446818..8456079+ (Branchiostoma lanceolatum)
ATGGCTGGTAACTTTTGGCAGAGCTCGCATTGTCAACAGTGGATCCTGGA
CAAACAAGATCTCCTCCGTGACCGGCAAGACGACTTGACCAACTTTCCCG
ACGATGAATACCAGAAAGTCCACATCTTCTACTGTGGTGTAATCCAGGCA
GTCGGAGAACAGTTGAAACTTAGACAACAAGTCATCGCTACGGCAACAGT
TTACTTCAAAAGATTTTATTCCAAGTACTCCTTTAGAACAATAGACCCAC
TATTGATGGGACCTACCTGTGTGTTCCTGGCATCTAAAGTAGAGGAATTT
GGTGTCATATCAAACAGTAGACTTATAACAGCCTGCCAGACTGTCATAAA
GAACAAGTTCTCCTATGCCTTCAACCAGGAATTTCCTTACAGAATAAACC
ATGTACTAGAATGTGAATTCTACCTATTAGAAATGATGGATTGCTGCTTG
GTGGTGTACCACCCCTACCGACCTCTGACCTCATATGTACAGGACATGGG
ACAGGAGGACACAGTCTTACCTCTGGCATGGCGAATAGTAAATGACAGTT
ATCGAACAGATGTTTGTCTACTGTATCCTCCTTTCATGATCGCACTAGCT
GCCCTGCACATGGCATGTGTCATCCTACAGAAAGATGCAAAACACTGGTT
TGCAGAGTTGTCAGTTGATATGGAAAAGATGTTAGAGATCACGCGCGTCA
TCCTGCGGCTGTACGACCTGTGGAAACAGTACGATGAGAGGAAGGAGATC
CTCAGTCTGCTCAGTAAGATGCCCAAAGCCAGAATTGCTCAGCCTGGGTG
A
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg01086.6-exon-Sc0000003-1570713199:8446818..8447088Blg01086.6-exon-Sc0000003-1570713199:8446818..8447088Branchiostoma lanceolatumexon
Blg01086.6-exon-Sc0000003-1570713199:8447611..8447717Blg01086.6-exon-Sc0000003-1570713199:8447611..8447717Branchiostoma lanceolatumexon
Blg01086.6-exon-Sc0000003-1570713199:8448185..8448269Blg01086.6-exon-Sc0000003-1570713199:8448185..8448269Branchiostoma lanceolatumexon
Blg01086.6-exon-Sc0000003-1570713199:8448747..8448816Blg01086.6-exon-Sc0000003-1570713199:8448747..8448816Branchiostoma lanceolatumexon
Blg01086.6-exon-Sc0000003-1570713199:8448942..8448993Blg01086.6-exon-Sc0000003-1570713199:8448942..8448993Branchiostoma lanceolatumexon
Blg01086.6-exon-Sc0000003-1570713199:8449215..8449270Blg01086.6-exon-Sc0000003-1570713199:8449215..8449270Branchiostoma lanceolatumexon
Blg01086.6-exon-Sc0000003-1570713199:8449536..8449571Blg01086.6-exon-Sc0000003-1570713199:8449536..8449571Branchiostoma lanceolatumexon
Blg01086.6-exon-Sc0000003-1570713199:8450291..8450382Blg01086.6-exon-Sc0000003-1570713199:8450291..8450382Branchiostoma lanceolatumexon
Blg01086.6-exon-Sc0000003-1570713199:8450940..8451007Blg01086.6-exon-Sc0000003-1570713199:8450940..8451007Branchiostoma lanceolatumexon
Blg01086.6-exon-Sc0000003-1570713199:8451517..8451596Blg01086.6-exon-Sc0000003-1570713199:8451517..8451596Branchiostoma lanceolatumexon
Blg01086.6-exon-Sc0000003-1570713199:8455929..8456079Blg01086.6-exon-Sc0000003-1570713199:8455929..8456079Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg01086.6Blg01086.6-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000003genomeSc0000003:8446818..8456079 +
Properties
Property NameValue
GeneIDBlg01086