Blg01083.0 (mRNA) - B. lanceolatum

Overview
NameBlg01083.0
Unique NameBlg01083.0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000003:1398222..1400746-

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg01083.0 ID=Blg01083.0|Name=Blg01083.0|organism=Branchiostoma lanceolatum|type=mRNA|length=2525bp|location=Sequence derived from alignment at Sc0000003:1398222..1400746- (Branchiostoma lanceolatum)
GAAGAGACGGTCGCAGTTATCTCATTTTAAAGCAAGCCTGTGGAAGAAGG AACTACATGCCATTGTGTGCTTGTATACTGGTTGGTAAGTTAGTTCTGTA GAGTAGAGTAGAGTAGAATAAGGGTAGAGTAGAGTTGTGTTTTGTGTAAA GCTCCAAACGTTTCCACACTGATGACTACTGATAACGGTATATTTAGGGG GGGGGGGAGGAGTTGTGCCGAATTAATCTCCCTTAGCATTTTATCCTCCG GTTTACATCTATTCACCACTTCAATAGACAATTTGTTTGAGAAATCTCTT GCTATATAGTGCTTGCAAGCCTATGCAGTTGTAGGAGTACATCATACTGG GGGACGTAACCGTTGGACGTTGCATTGGGGATATCTTTACATGCATTTTC AAGGTGGTGGATCTGGCAGAATGATAAGCAAACGTTAACGTTGATCGTCA AAGGCTTATTTTTGGTTTATCAATACAGAGAACCATTCCATACCATGCTA TAGATATCTTTACGAGGTAAAAAAATCTCCAGATGCCATACAAGCTTCAA CCGCACGAAGGCGCCACTGAGTGGTGACGATCTCTACGTGGAGAAGTCAA TATGAAGATGGTAACACGGTGCAGCCGCAAGAGGGCGCTGTTGTCTATCG GCGCTCTTGTCCTCTCAGTCGTCTTGGTGGCGCATTACTCATGGAATGTT CCATTGTCGTTTCAAGGTCAAGTCAAGAGGAAAACCGAAAGGTAATATGA GTAACCTGGTTCCTTGAGCTTGTTGTCTTTCTTTACTCATGACCTCACAC AATGTTATATCCCTCTAGCTCTCTGCTATACTATGCTTACTGAATTTTTT ATCCATAGCTCCCAATAAAAGTCACCTGATCTTAAAGTTTAAAGCTACTG GCCAGTCTTCATCTTTATGGCAGGGGCTTTGACGTTAGACTTCAATGCAT TACACTACAAATCCGCACTTGAAACTGTGAGATGGCTTATAACCGCACTT TGTCCGATGTTTAAAAAAACACTTTGTCCCATATTTTCCAGACGCCGCTT CAATGCAGGTGTGATTGGAAAGAACGCCACCTTCCGGGATAACGTCGTAC TGCGTGAAGAAACATACCCATCCAACGACAAGGATGTCAGCAGAGGAAGA CTTCAAGGCAGATGCAACCGAAAATCTAACATAGTTTTCCTGAAGAGCCA CAAAACAGCCAGTTCTACCGTACAAAACATCCTGATGAGATACGGACTGA ACAATAACCTCACCTTTGCCCTCCCCAAAAAGGAGAACTTTCTCAACTGG CCGAACTTCTTCCACAAGTCTTCTGTTCTACAGGAACATCTCCATGGTAA CCAGGAGCGTCTCCATGGTAACCACACGACCTACAACATCCTCTGCCATC ACACGAGGTTTCACCACGACAACATCCGGGACCTGATGCCAGACGACTCT GTGTACGTCACCATTGTGAGGAACCCGGTGGACATGTTCGAGTCGATTTT CACCTACAGGAGACTCGACAAGACGTATCACATTTCTCAGCCAGACTCCT TCAAGGCGTTTCTCGACAGCCCCTCAGACTTCGTGAAGAAATATGGTCGG ACCGAACATTCCCAGAATCCTTTGTTCTACGACCTTGGTTACGACAGTGA TCAGCTGACGTCATCGCAGACGATACAGTCAGCTATTGATCGGATCGATC AAATATTCTCCGTTGTCATGGTAGCAGACTATTTCGAAGAGTCATTGATA TTGATGAAGCATGTTTTATGCTGGTCTTTAGATGACGTCACCTTCTTCAA GGTCAACGTCAGAAGCACAAAGTCTGTGCGTCACGTGACGGCGGACATGG CGGGAAAAATCCGCCAGTGGAACAAGGCGGACGCCATGTTGTTCGAACAC TTCAACAGAACTTTGTGGGCGAAACTTTCCAACCTCCCCTTCAATTGGAG GGAGGAAGTCCAACTCCTTAAGGAGAAAAACCAGCGTCTTAAAGACGAGT GTCTGAAGTCTGACGACGCCTCCAACACGGAGATAAGAGACGAGAAGTTC CGAGTCTGGGAGCCGGAGGGCGTTTCTGTGCGCGGGTTCCTCCTGAGAGA CTCTGTCCGGGAGAACAGGACTTGTGTCAACATGGCGAAACCGCCCAAAC CGTTCACTTACGAGCTGCAGGACAGGGAAAGGGCGAGACTTGGACTCGGG ACAGCCGGTTTGGGATAATTGTGTGGAACCTGTCCTTATTGGTTCATTTA TGCAATAAAGAATATTTTTCAAGTCTTATTGAGTCAATTGGTAAAATACC AGCTCCACTTCAGGTATTAGTTCATACATGTACATGTATGTTCTGAATGG AAACGGGGAAGTTTCTCATGACAGGTGTGAATGCGTCATGCAAACGTGGG TGCAGTTGTCGAATGGAATTGTTTATCAAAGGATTTTTCACATCGCCGAA GAGGCTTCGGGGGACAAAATCGGGAAAGATTTTGCTATCACTTTTCTTTA ATGAACGCAACGGACAGAAGAAAAT

Coding sequence (CDS) from alignment at Sc0000003:1398222..1400746-

>Blg01083.0 ID=Blg01083.0|Name=Blg01083.0|organism=Branchiostoma lanceolatum|type=CDS|length=1317bp|location=Sequence derived from alignment at Sc0000003:1398222..1400746- (Branchiostoma lanceolatum)
ATGAAGATGGTAACACGGTGCAGCCGCAAGAGGGCGCTGTTGTCTATCGG
CGCTCTTGTCCTCTCAGTCGTCTTGGTGGCGCATTACTCATGGAATGTTC
CATTGTCGTTTCAAGGTCAAGTCAAGAGGAAAACCGAAAGACGCCGCTTC
AATGCAGGTGTGATTGGAAAGAACGCCACCTTCCGGGATAACGTCGTACT
GCGTGAAGAAACATACCCATCCAACGACAAGGATGTCAGCAGAGGAAGAC
TTCAAGGCAGATGCAACCGAAAATCTAACATAGTTTTCCTGAAGAGCCAC
AAAACAGCCAGTTCTACCGTACAAAACATCCTGATGAGATACGGACTGAA
CAATAACCTCACCTTTGCCCTCCCCAAAAAGGAGAACTTTCTCAACTGGC
CGAACTTCTTCCACAAGTCTTCTGTTCTACAGGAACATCTCCATGGTAAC
CAGGAGCGTCTCCATGGTAACCACACGACCTACAACATCCTCTGCCATCA
CACGAGGTTTCACCACGACAACATCCGGGACCTGATGCCAGACGACTCTG
TGTACGTCACCATTGTGAGGAACCCGGTGGACATGTTCGAGTCGATTTTC
ACCTACAGGAGACTCGACAAGACGTATCACATTTCTCAGCCAGACTCCTT
CAAGGCGTTTCTCGACAGCCCCTCAGACTTCGTGAAGAAATATGGTCGGA
CCGAACATTCCCAGAATCCTTTGTTCTACGACCTTGGTTACGACAGTGAT
CAGCTGACGTCATCGCAGACGATACAGTCAGCTATTGATCGGATCGATCA
AATATTCTCCGTTGTCATGGTAGCAGACTATTTCGAAGAGTCATTGATAT
TGATGAAGCATGTTTTATGCTGGTCTTTAGATGACGTCACCTTCTTCAAG
GTCAACGTCAGAAGCACAAAGTCTGTGCGTCACGTGACGGCGGACATGGC
GGGAAAAATCCGCCAGTGGAACAAGGCGGACGCCATGTTGTTCGAACACT
TCAACAGAACTTTGTGGGCGAAACTTTCCAACCTCCCCTTCAATTGGAGG
GAGGAAGTCCAACTCCTTAAGGAGAAAAACCAGCGTCTTAAAGACGAGTG
TCTGAAGTCTGACGACGCCTCCAACACGGAGATAAGAGACGAGAAGTTCC
GAGTCTGGGAGCCGGAGGGCGTTTCTGTGCGCGGGTTCCTCCTGAGAGAC
TCTGTCCGGGAGAACAGGACTTGTGTCAACATGGCGAAACCGCCCAAACC
GTTCACTTACGAGCTGCAGGACAGGGAAAGGGCGAGACTTGGACTCGGGA
CAGCCGGTTTGGGATAA
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg01083.0-exon-Sc0000003-1570713199:1400663..1400746Blg01083.0-exon-Sc0000003-1570713199:1400663..1400746Branchiostoma lanceolatumexon
Blg01083.0-exon-Sc0000003-1570713199:1400006..1400268Blg01083.0-exon-Sc0000003-1570713199:1400006..1400268Branchiostoma lanceolatumexon
Blg01083.0-exon-Sc0000003-1570713199:1398222..1399705Blg01083.0-exon-Sc0000003-1570713199:1398222..1399705Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg01083.0Blg01083.0-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000003genomeSc0000003:1398222..1400746 -
Properties
Property NameValue
GeneIDBlg01083