Blg01067.0 (mRNA) - B. lanceolatum

Overview
NameBlg01067.0
Unique NameBlg01067.0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Full-screen view
Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000003:8113842..8118308-

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg01067.0 ID=Blg01067.0|Name=Blg01067.0|organism=Branchiostoma lanceolatum|type=mRNA|length=4467bp|location=Sequence derived from alignment at Sc0000003:8113842..8118308- (Branchiostoma lanceolatum)
CTGCTGTCAGCTCCTGACAACGGTGGAAAGAATGGCGGCAATTCCTACCA
AGACATAGTGACTTTCACGTGTAACCTCGGATACGACCTTGTGGGAAGCT
CAAGTGTGACCTGCCAAGATGACGCCACATGGAGTGCAAATGCCCCAACC
TGTACACGTATGAGAGAAAGATTATGTCTACTTAAACAGATCAGCTTTTG
ATAACCAAGAATGATGAAAGTCATATTTTGGGAACACAAACGGCAAACTA
TACCATTATCAGAAATAATTAGTTGATTAAAAGTGGTTTCATTCCAAAAG
TAGTCGCTAATTACATTGTATGGTGCATGAAAGAACTGCTGTCTGCAATG
ATAGACGGTGAGGTTAGTGAAAATAATGTAATTATCACAAGAAAGTATAA
TTCAATTAGTTCATCTTCATTTGTTTAACTATATCAGGTGTGCAGTGCCC
AATGTTGCAGTCTCCGACAAATGGTGGTTCCAGTGGCGACAACTACTACC
AGGACGAGATGAGCTTCGGCTGTGACTCTGGTTACGAACTTGAGGGTTCA
GCAACCATAACGTGCCAGGCAGACCGCACGTGGAGTGACGACGCCCCCAG
TTGTGCACGTAAGTTTGTTTCAAGTATTGTTGAAAAATAGTTGAAAGGTT
TTACCTTTGTTCGAATTGATGCTATTTATCAATGAATCTTCTCACTCGGT
TGGTAAGTGTCGTGATTACTTGCATTGCCAATTACCATCCAAGGTTTTGG
TAGTCCCTTTGTAACCTTCCAAGAAGGGGGTACAAGTTAAGTCATGTTTT
GAATGACACCCTTCCAACTAGCCTGGAATCCAAACCTATTATAGGTCCCG
AGTCTCTCTCCGCAATTTGCGCAGAGAGACTCGGGAGCTATAATAGGTTT
GGATTCCAGACTACCTTCCCACTGCATGGCCACCTACCAGTGTCAAGTGG
AAGCAGTCAGTACAGTCATGAGATAGGTAGCAAAGGGGATATCGAAACGA
AACTGGTTGTGTTAAAACAACTATAATATTCAGTTATCCATCCAGCCATA
CACATTTAAACATGCCTTACTCATTTTCAGCCGTACAGTGTCCGCTGCTG
GCAGCTCCTGACAACGGTGGAAAGACTGGCGACAATTACTACCAGGACGT
GGTGACGTTCTCGTGCGACCCTGGATACGAGCTTGTTGGAGTTCCCAGCT
TGACCTGCCGAGCAGACAGAACATGGACTGGGGACGTTCCAACCTGCACA
CGTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNGGACCTTGATCCAAAATATCATTTCTAAACATGACA
TTACTCCTTGGTCTATCTAGTTGTACAGTGCCCACTGCTGTCAGCTCCTA
ACAACGGTGGAAAGAATGGCGGCAATTCCTACCAAGACATAGTGACTTTC
ACGTGTAACCTCGGATACGACCTTGTGGGAAGCTCAAGTGTGACCTGCCA
AGATGACGCCACATGGAGTGCAAATGCCCCAACCTGTACACGTATGAGAG
AAAGATTATGTCTACTTAAACAGATCAGCTTTTGATAACCAAGAATGATG
AAAGTCATATTTTGGGAACACAAACGGCAAACTATACCATTATCAGAAAT
AATTAGTTGATTAAAAGTGGTTTCATTCCAAAAGTAGTCGCTAATTACAT
TGTATGGTGCATGAAAGAACTGCTGTCTGCAATGATAGACGGTGAGGTTA
GTGAAAATAATGTAATTATCACAAGAAAGTATAATTCAATTAGTTCATCT
TCATTTGTTTAACTATATCAGGTGTGCAGTGCCCAATGTTGCAGTCTCCG
ACAAATGGTGGTTCCAGTGGCGACAACTACTACCAGGACGAGATGAGCTT
CGGCTGTGACTCTGGTTACGAACTTGAGGGTTCAGCAACCATAACGTGCC
AGGCAGACCGCACGTGGAGTGACGACGCCCCCAGTTGTGCACGTAAGTTT
GTTTCAAGTATTGTTGAAAAATAGTTGAAAGGTTTTACCTTTGTTCGAAT
TGATGCTATTTATCAATGAATCTTCTCACTCGGTTGGTAAGTGTCGTGAT
TACTTGCATTGCCAATTACCATCCAAGGTTTTGGTAGTCCCTTTGTAACC
TTCCAAGAAGGGGGTACAAGTTAAGTCATGTATNTACAATTTTTCTAAAT
ACAGTTGTGCAGTGTTCCATACTGGGCTCCCCTACAAACGGTGCAGTGAG
CGGTTCAAACTCCTACGGAGACGTGCTCACCTTCACATGTGTCCCAGGAT
ACGTTCTGGATGGTGCTTCGTCGCTGACATGCCGGGCAGACGGAAGTTGG
AGTTCAAGTCCACCAATATGCGAAAGTAAGATAGGAACTTTGATTTAGAT
ATCTAAATGGCAACACACCATCAAGTAGATATGAATAAGTGAATATTAGT
GTTTCTTAGTTTTATCAATAGATTTAAGAGGAAGTAAATCAACTGTTAGC
AAACCAACAATTTGAAGGCTTATCATCATCGTCTAAAGTATATTGATGGA
CAAGGCATCGTGTTGAACGCTGACTTGCACAATTCTGTGATCTGCTTGCT
AGCGTTTTGATAAGAGGGCGGATTTTACATTCACTTAATATGTTGTATAA
AACGGCATTGTGTTACTTTTTATTTGCCCGTAGTCGGACAGTGTCCCGTG
CTGGGAGCACCTTCAAATGGTGCCGTGAGCGGCTCCAATACCTTCGGATC
AATGCTCAGCTTCACGTGCAACATTGGATACAATTTGGTTGGCTCAACTA
CACTCAGCTGCCAGTCAAACCTGGCCTGGAGTGGAGATCCACCAACATGC
TCAAGTATGATGTTTAG

Coding sequence (CDS) from alignment at Sc0000003:8113842..8118308-

>Blg01067.0 ID=Blg01067.0|Name=Blg01067.0|organism=Branchiostoma lanceolatum|type=CDS|length=807bp|location=Sequence derived from alignment at Sc0000003:8113842..8118308- (Branchiostoma lanceolatum)
ATGTTGCAGTCTCCGACAAATGGTGGTTCCAGTGGCGACAACTACTACCA
GGACGAGATGAGCTTCGGCTGTGACTCTGGTTACGAACTTGAGGGTTCAG
CAACCATAACGTGCCAGGCAGACCGCACGTGGAGTGACGACGCCCCCAGT
TGTGCACCCGTACAGTGTCCGCTGCTGGCAGCTCCTGACAACGGTGGAAA
GACTGGCGACAATTACTACCAGGACGTGGTGACGTTCTCGTGCGACCCTG
GATACGAGCTTGTTGGAGTTCCCAGCTTGACCTGCCGAGCAGACAGAACA
TGGACTGGGGACTCTCCGACAAATGGTGGTTCCAGTGGCGACAACTACTA
CCAGGACGAGATGAGCTTCGGCTGTGACTCTGGTTACGAACTTGAGGGTT
CAGCAACCATAACGTGCCAGGCAGACCGCACGTGGAGTGACGACGCCCCC
AGTTGTGCACTGTTCCATACTGGGCTCCCCTACAAACGGTGCAGTGAGCG
GTTCAAACTCCTACGGAGACGTGCTCACCTTCACATGTGTCCCAGGATAC
GTTCTGGATGGTGCTTCGTCGCTGACATGCCGGGCAGACGGAAGTTGGAG
TTCAAGTCCACCAATATGCGAAATCGGACAGTGTCCCGTGCTGGGAGCAC
CTTCAAATGGTGCCGTGAGCGGCTCCAATACCTTCGGATCAATGCTCAGC
TTCACGTGCAACATTGGATACAATTTGGTTGGCTCAACTACACTCAGCTG
CCAGTCAAACCTGGCCTGGAGTGGAGATCCACCAACATGCTCAAGTATGA
TGTTTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg01067.0Blg01067.0-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg01067.0-exon-Sc0000003-1570713199:8118152..8118308Blg01067.0-exon-Sc0000003-1570713199:8118152..8118308Branchiostoma lanceolatumexon
Blg01067.0-exon-Sc0000003-1570713199:8117701..8117871Blg01067.0-exon-Sc0000003-1570713199:8117701..8117871Branchiostoma lanceolatumexon
Blg01067.0-exon-Sc0000003-1570713199:8117074..8117228Blg01067.0-exon-Sc0000003-1570713199:8117074..8117228Branchiostoma lanceolatumexon
Blg01067.0-exon-Sc0000003-1570713199:8114717..8114864Blg01067.0-exon-Sc0000003-1570713199:8114717..8114864Branchiostoma lanceolatumexon
Blg01067.0-exon-Sc0000003-1570713199:8114334..8114496Blg01067.0-exon-Sc0000003-1570713199:8114334..8114496Branchiostoma lanceolatumexon
Blg01067.0-exon-Sc0000003-1570713199:8113842..8114025Blg01067.0-exon-Sc0000003-1570713199:8113842..8114025Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000003genomeSc0000003:8113842..8118308 -
Properties
Property NameValue
GeneIDBlg01067