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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000003:3363718..3369400+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg01063.5 ID=Blg01063.5|Name=Blg01063.5|organism=Branchiostoma lanceolatum|type=mRNA|length=5683bp|location=Sequence derived from alignment at Sc0000003:3363718..3369400+ (Branchiostoma lanceolatum)
TGATAATAATAAATTCAAGACAATTTCAATACTTTTATTTCAAGTTATTG
TTATTGATAGCAACATTTGAATGCAGCAATTTTTTATTTAATCTTTTTCA
GGAATATGAACCAAAAGCTAAGAGATGACAAAGATGAGTATGAAACGATA
AGAAAGGTATGGATGGCATTGATGTGTCCTTGTACTTTGAAGAAGTTATA
ATTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG
TGCGTGCGTGCGTGTGTGTGTGACTATTTTTCGCCAATGATATGGCCTAC
CTTGTTGTAATTACATCATACATATATGTAAAGAATAGGGTAGGGGTCAC
ACCATAAAGTGTTTTCACTTAACATACATCTTACAGACTGCAGTCAATTT
AAAACTGTTGTGTTGGGGAGGGGGGCTATAGAGCTGCAGAATCTTATAAC
TAATCTTAAAATGTTCTATTTCCTCCACAGAACAGTCGAGGTGAGGCTCG
TGAAGTCCCCGTAACCATGGAAACCAGACCAGCCCCGCTAGCCCGACAAG
GCTCCTCCCTCAGTAAATACCTACCTGCATCTAGTGTTGGGAGGTGCCCT
TTTTTGTTGGTGTTTGTGTTTACGTTTGCAACTAACATGATCTGTGTGCT
TTTCGTAACACTCTTGTAAGGCAATACCAAGTAATATTTATGGATGACGT
CCTTTGGAGACCATAAATCTAATGCGAGAGCGCAAAAAACAAACAAGAAA
GGCTGAAAAAAGCAAGATGCCTAGATTTGAAATATAATAGTCGACGACAC
ATGTTAGGACACAAATTGAGAGAACACAGTGTAACAACTAACAATTCTTT
TATTCATCATGAAAACAACAATAATTTGAATAAATCACTTGAAGTTGAAC
AGCAGTTGTTGTCCAGTCCTGTTTCATACGATTTGCGGCACTGTCATAAC
TCTTTGGTCATAGTTACAGGAAGCGGAATTTCTTGGGTTTTTTTCTGGAA
CAGACCAAAATCAATGCGCGCGTGGACGTCATCCATAAAAATTACTTGGT
GTAGCCTAACGTCTAATGTTGGTGTTCTGTTGGGTGTCCTTTTCCTATCT
TGATATGAGGACTTTTAAAACATGAAATATCCTTATAGAAGTAACATTCT
TATGCTTGCAGAGCTTAATGTAGACTATTAGCTATACAATGTAGAAATGT
ATCAAACATGTAACCATATGTTCGTCTTTATATGTATGATTTTAATCTTG
TTCTAACATCAACTAAATCTCCAAGCAATTGTTGGGATAGAATTGTAACT
GACAGTTACATCTTCTGGCTATAATCGTTATTTTTCTGATACAGAATCAT
TAAGAAATATCCAGCATTGCCTTGGAAAACTAACAATGAGCAATTATCTA
TTGTATTTACATCATGCTTCTTTAAATGTAGATTTCTGACAAACTGCAAC
GCTTTTCTATCTTCTAAAAGGACAGTCTGCAATCATAACTCTTTGTGTTT
GCTTATTAATTTTTCTTTTCTCCCTCACAGGACAGAAGGTGTCCTCCACA
GGCACAGCTTCCCCCCGCACTTAGACCCGCTGGAAATAGAGGATGATGGG
ATAGAATACGACCTAATTATGGAAGAATTAACGCAGAGTTCCTTTGACGA
CGACAACGAATCAACAGATGTGATTTCAGCTGATCTCCCGTCCCATAATC
CAACAGTAGAACGTAGTTTCAGTAGACGACATCCAACCAGACAACTTTCG
CGGCAGTCGCGGATCGTAGGAGAAGAGGAACACGGTGATTCAGCGGATAG
TGTAGCGGGGACGAGGGATAGCGTAGAAAATAGCGAGGAGGAAATGTTCG
ATATTGGGGAACCAAGGGGACAACCGGTTGGTGGGAATACTGTAGGCAGC
ACTACTCCTGAAGCGGTAAGGTCCATTTGTTTTGAGAGACTAGTCAAGCA
AATATACTTGCTATATTCTAGGTATGTAAAAATGATTCATAATTTTATTT
CTATTTTGATTGATTTGTAATTTGAAATCATCAATTTTACAATTTTGACT
CTTGATCTATAATGCTTGTAAATTTACAACATTTTGAAAAAGTTGGTCGA
AAGAAATTCATAATTATCCTCTGTTGCTTGATCTTTTTTAGCCTTTTTTG
ATTGCCAACAGCAGAGGCGATTTTATACAGTAACTGTGACATACAAATGT
ATAGAAGTTCAACAAATCCACTTGGCATGCCTTACCATAGACATGCATCA
TGTTCAAGGTTGTCATACTCTAGCTAAAGGCACTTCTACATGTCTATCCT
ACAGGATGCCCCAGGCACTGCCAGGATGTTTAAGGTGGTGTTTGTCGGGG
ACTCCGGTGTGGGAAAAAGCACCTTCATCTACAGGGTGTGTCACGATGAC
TACAAGGCAACGTTTTCATCTACCATTGGTGGGTTATACCAACACATCAT
ATAGTTAATGTGAATGTTAATGCAATTCATAGCCCAATGAGGGAAACCCT
GCTTATACTAAGTCTGTACAGTTTTGAAAACCAAATAAAACCATTATTAT
TACACTTAACAATAAATAATTTATGATTTCTGTCCACTTGAAGTACAAAA
AAGTTGTAACCTGCACTTATTGAAGCTATCATTTTATGGTACACAAAAAT
TTCAATAATTCTCTTAAGAGGATTTTTCGTTAAAATGCTAAGAGGTCAAA
GTTATCAAGTAAACATAGTGAACTTAGACATAACAAATCAAAATTGTTCA
AATTTCTGGCCAACTTTGTGTTTCTTTCACGGTGAAATAGAAATAGGGAA
AAGGGACAAAACACTGTACAAAACGATGCTTTTCTATTGTACCGACCATA
TTGTTATCATGATATTATTGTTATTTACCTTCAGGTGTGGACTTCCATCT
GAAGACAGTGGTAGCAAAGAACCAGAAGATCACTATGCAGCTGTGGGACA
CTGCTGGACAGGAAAGGTGCGCCCCCTTGCTTATCTTGTTGGTACTACAT
TATATAGTGACCAAAAGTTCAAAATTTACTGCAGTTCAAACAGTACTGCT
GCAATACAATTCATCAATGGCCATTTTCTTTTCAATGAAGTATATTTCCC
TATTAAGTATGAACAAATGAATTCAAAGTGGAACAGACTTAATGAATTAT
CCAATTTTTATGAACATAAATTAAGTAAAATTGGTGGAGAACAAAAAATC
ACACTGAATGATTGTGCTTTTGTTCTATGAATAGTTTGATCAGGTTAATG
AATCTCTGGATAACAAAGTTGTACAGACAGCTTTCTCTGTTTCAAAGCAC
TCAGCATTTGGGAAAGAGTTACGGTTACCGTAGTTAAACACACACCACTA
CCAGCGGACTAACCTCCTGCTGTTACGTGATTGTTATGTGGCCCAGTGGT
TACAGAAACATAGATGGGTGCCACCCTTACCATCTGGTGCAGGAAGAACT
TTAACTTTCCCAACTGTCTTTGTTTCCCAGGTTTGGTAGCATCACGAAGT
CGTACAGTAAGTTGTACTTCCGGAAGGCAGATGTAGTGATCATTTCCCTG
CTGGAGTGATTGCACAAAGTTGTGTGGCCCAAGGGCTGTCGATGATGTGC
GTTGCCCTATGCACCATCTAGTACAGGAATAACTTTTTTCAATCAACTTT
TTTGACTTTGTTTGTCTCCCAGGTTCCGCAGCATCACGAAGTCGTACTTC
CGTAAGGCGGACGGAGTGATCATCATGTACGACGTCTCGGCCGAACCAAC
CTTCACCAGCGTCAGGAGCTGGATGGAGAGCATACAGGTACAGTATGGAC
TTGGGGCAGACTTTCATAATTCTGATGCATTTCATGATGTTCATCCATCG
TACATAGATGAGGGCCTTGACTTCATATCAGTTGTTCTTGTACCTCATGT
TATTTCTTAGTTTGATTTCCAAATGAAGTACAAGTTACCTTAAAATTTGA
ACCTGTCATTAAGTGACCACCTCTGCACCTCGATAGTGATACTGTATAGA
CAAACCTGTACTTAGTGTCCACTTCTGCATAAGGAACACCTAGCCAATGT
GGCCTGTGGTACTGTAGATTATTTTTCCAATTGACACAAGCATTAAAAAT
CCTGTCTATAGTGGTCCAGTCTGCTGTAACCATTTTCTTTAAGATCCTTG
AGTTATCAGTATAATTTCAGGTTTGTATATTCTGTAGAGGTGACATATCT
TTGGCTCATTTTTTAATTGTAAGGAGCAGTGAATGTAACATAGCAATTGC
AATAAGTATTGTCTTTCACTTTTTTTTGCTTGGCAAGTTGGTACGTAATA
CCTGTTATGATCCCTGTTCACCAGGAGGGGACATCAGAGGACACCGTTCT
GATGCTGGTGGGGAACAAGGTCGACCTGCTTCTGGAGAATGACATGTCAG
GGGTCAAAAGTCACGTGGCAAAAAGACTTGCACAGGTCAGTGGAGGTCAA
TGTCAAGATTTTGAGTGTCCTGATAGAGATCCAGGAATGAATGTTACAAT
GGTATTTGAATTGGACAATACGCAACTTTGCATTCTAGAGTTTGAAATCT
CCCAGACCAAGTGCATTTCCCTTGTTTTATGGTAAAAGTACAATATATGC
TTTCATAATATCTTTAAAGAACCAATAATTTCTGTATCTTCCAGTACAAT
TACTCAGTCTGTTGCATTGCAAAATTAAAGTGTTCTTTTGAGTGGGTGAT
CAGACTGTTTTTCTTTGCATATGTATAGGAATATGATGCCTTGTTCTTTG
AGAGCAGTGCCAAGACTGGTGTCAACATTACAGAGGCTTTGCTACACATG
GCAGGGTAAGTAAAACTGTGAATCTATATAGTTACCTTACAACTGTCATA
GTTTTTCTCATGAATTTGTTTATTGAAGATCATTGATGTTGTAGCCATAG
CTACCAAAATGAATCAAGTACTAAGTAAACTATGTAAAATCTTGAGCGAA
TTTATTGAAAAATATTTTGTCGGATTGTGTGAAGGTGACTCAGATTTTGT
CTTTGTTTTGAATGTATAAATGAATGAATGGTTTGTTAAGAGCATTTTGA
TCATCTATAAAAAGTATCTGGCAGACACAGGTTGATTTTCATACTTTACA
GATACTACTTAAGACTAACTGTTGACTTCTAAAAGGGGGATTTACAAAAT
TATCATTCTTTCACAGAAAACTGTGTGAAAAGGAAGACCAGCAGATTGAG
AAGGCTCTAAACCTAGAAGAGGCAGTCAGGGAGAAGAGATGCTGCAAGAT
GTAGATAGAAATAGCTTCCATCGGGCTGGTACCTGTACAATAGTACTCAT
ACGTTGATGAAGGTTAGATCCAGGTAATAAGATACGCCAAAAATAGTTTA
GCTCATCGACAAGCAACTGGATAAAATTTCGAAAATTTATTTTTCGACAA
TTTCGAAATTTTATCTAGTTGCTTGAGTAACTATTTTTAGTGTATGATAT
TAGCTGGTGTGTTACGCCTATTGGCATTTATACTGGCTATATAGATACAG
AATGATACAGAATATTACTCATACTCATAGTGATAGTTATCACTATGGCA
TGGATGTAATTTTTGTGTGGTTCATGACGTTCCCATAGTTTCTGCAGTAT
TATGTTGTGTATTTATGATCAGTTCCACAGGCAGCTAAGAAAGCGCCAAT
GCCAACTTATCTAGACGTCAAGAAAGTGAAACC Coding sequence (CDS) from alignment at Sc0000003:3363718..3369400+ >Blg01063.5 ID=Blg01063.5|Name=Blg01063.5|organism=Branchiostoma lanceolatum|type=CDS|length=1146bp|location=Sequence derived from alignment at Sc0000003:3363718..3369400+ (Branchiostoma lanceolatum)
ATGAACCAAAAGCTAAGAGATGACAAAGATGAGTATGAAACGATAAGAAA
GAACAGTCGAGGTGAGGCTCGTGAAGTCCCCGTAACCATGGAAACCAGAC
CAGCCCCGCTAGCCCGACAAGGCTCCTCCCTCAGTAAATACCTACCTGCA
TCTAGTGTTGGGAGGACAGAAGGTGTCCTCCACAGGCACAGCTTCCCCCC
GCACTTAGACCCGCTGGAAATAGAGGATGATGGGATAGAATACGACCTAA
TTATGGAAGAATTAACGCAGAGTTCCTTTGACGACGACAACGAATCAACA
GATGTGATTTCAGCTGATCTCCCGTCCCATAATCCAACAGTAGAACGTAG
TTTCAGTAGACGACATCCAACCAGACAACTTTCGCGGCAGTCGCGGATCG
TAGGAGAAGAGGAACACGGTGATTCAGCGGATAGTGTAGCGGGGACGAGG
GATAGCGTAGAAAATAGCGAGGAGGAAATGTTCGATATTGGGGAACCAAG
GGGACAACCGGTTGGTGGGAATACTGTAGGCAGCACTACTCCTGAAGCGG
ATGCCCCAGGCACTGCCAGGATGTTTAAGGTGGTGTTTGTCGGGGACTCC
GGTGTGGGAAAAAGCACCTTCATCTACAGGGTGTGTCACGATGACTACAA
GGCAACGTTTTCATCTACCATTGGTGTGGACTTCCATCTGAAGACAGTGG
TAGCAAAGAACCAGAAGATCACTATGCAGCTGTGGGACACTGCTGGACAG
GAAAGGTTCCGCAGCATCACGAAGTCGTACTTCCGTAAGGCGGACGGAGT
GATCATCATGTACGACGTCTCGGCCGAACCAACCTTCACCAGCGTCAGGA
GCTGGATGGAGAGCATACAGGAGGGGACATCAGAGGACACCGTTCTGATG
CTGGTGGGGAACAAGGTCGACCTGCTTCTGGAGAATGACATGTCAGGGGT
CAAAAGTCACGTGGCAAAAAGACTTGCACAGGAATATGATGCCTTGTTCT
TTGAGAGCAGTGCCAAGACTGGTGTCAACATTACAGAGGCTTTGCTACAC
ATGGCAGGAAAACTGTGTGAAAAGGAAGACCAGCAGATTGAGAAGGCTCT
AAACCTAGAAGAGGCAGTCAGGGAGAAGAGATGCTGCAAGATGTAG
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg01063.5-exon-Sc0000003-1570713199:3363718..3363873 | Blg01063.5-exon-Sc0000003-1570713199:3363718..3363873 | Branchiostoma lanceolatum | exon |
| Blg01063.5-exon-Sc0000003-1570713199:3364198..3364310 | Blg01063.5-exon-Sc0000003-1570713199:3364198..3364310 | Branchiostoma lanceolatum | exon |
| Blg01063.5-exon-Sc0000003-1570713199:3365248..3365632 | Blg01063.5-exon-Sc0000003-1570713199:3365248..3365632 | Branchiostoma lanceolatum | exon |
| Blg01063.5-exon-Sc0000003-1570713199:3366022..3366145 | Blg01063.5-exon-Sc0000003-1570713199:3366022..3366145 | Branchiostoma lanceolatum | exon |
| Blg01063.5-exon-Sc0000003-1570713199:3366602..3366683 | Blg01063.5-exon-Sc0000003-1570713199:3366602..3366683 | Branchiostoma lanceolatum | exon |
| Blg01063.5-exon-Sc0000003-1570713199:3367390..3367504 | Blg01063.5-exon-Sc0000003-1570713199:3367390..3367504 | Branchiostoma lanceolatum | exon |
| Blg01063.5-exon-Sc0000003-1570713199:3368042..3368152 | Blg01063.5-exon-Sc0000003-1570713199:3368042..3368152 | Branchiostoma lanceolatum | exon |
| Blg01063.5-exon-Sc0000003-1570713199:3368446..3368522 | Blg01063.5-exon-Sc0000003-1570713199:3368446..3368522 | Branchiostoma lanceolatum | exon |
| Blg01063.5-exon-Sc0000003-1570713199:3368884..3369400 | Blg01063.5-exon-Sc0000003-1570713199:3368884..3369400 | Branchiostoma lanceolatum | exon |
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000003 | genome | Sc0000003:3363718..3369400 + |
Properties
| Property Name | Value |
|---|
| GeneID | Blg01063 |
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