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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000003:1364320..1369570- Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >Blg01001.0 ID=Blg01001.0|Name=Blg01001.0|organism=Branchiostoma lanceolatum|type=mRNA|length=5251bp|location=Sequence derived from alignment at Sc0000003:1364320..1369570- (Branchiostoma lanceolatum)
TGTGAATCTTAGTACGTAAAAGGAACGCAGCGAGGTGAGTGTGCTGTTGT
GTGTTTTAATGGTGTTTATTTACACGTTCTTGCTTGAATGGCTCTTGAAT
GGGCTAAAAGCAGTAGTTTGAATATCGTATGAAAACAACAATAAGGTTGT
TTACGTCGCGAGTTTAGATTCGGCAGTGTTGGTCATTATTGATCCCGAAG
AAGGCGACAGTGGTCGTCGAAAATTCGATCCGTGAATACCTTAGTGTTGG
AAGAAAGTTTAGCATTGTATTATGAGTACTACCAACACAGATGAGCTTTC
ATTATAACAATAAGGTTGGTCAGGCAAAGGTTGCCCCATAGCCTTTGTCA
AGCCAGAGGGGCAGTTGGTTGCTATCCGCTGTGTCTAGGGCTAGCCTCCT
TTGAAGACTTCCTGGAACGGCGGCGTATATATTGGGGTGGGGGGTGGCGG
TGTTACTTGATTTCTTACGTGGGCCAAGGATCTCTAATGCCGGCTGAGGG
ACTTTCACCGCCGAGGGAATTATGTCGCCGGAAGTCCCCAAGCCGCCATT
AGAGAACCTTGGCCAGTGTAAGAAATCTAGTACCCCCCCCCCCCCCNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGCCAGT
GTAAAAAATCAAGTCCCCCCCCCCCCCCCAATATATACGCCGCCGTTCCA
GGTAGTCTAGTATAGGGCACGGCATTGGAAGTAGGCGGAGCCTAACCTTC
TCTTTTCACCAACTTCGAGTCAGGTTCCCTTTTGATACCTGGGTGGAGTG
AGGAAAATCGTGTAAAGTGCCTTTCCTAAGGGCACAACATCAGTGACAGG
GGGTTCGAACCCAGGACCTCTGGGCCAAACGCCCTATGGCCATGTTGATT
TGATTATACGGATGGCATCCCATGAGAAACCCAAAACTGATGCGAGCGTG
CGAATAGATAGAAAAGTTTGCCCCCTCCCCCCAAAAAGTTGCCTTCATTA
TGAAATCTAAGTGGTCAGGAAGGTTGAACAAATATATAATCACATATGGT
TTACCTGATAATAGATTCTTATTTTTTCCCTCACATCTTCTTCTTGCACT
TTGAAATTTGCTTTGGCATGCTACGACATTGCTATCCGTTTCCCGAGTCG
TTTTTTTGGAAACGGACAAAAATTGATGCGCGCGCGGATATCATCCATAG
AATCAAATCAACATTGCCTAACCGCCAGCTGGTTGCCGGTATGGTACTAC
TACTACTAATAATAATGGTTTATTGTTCAGAAATTATCCGTTCAATGTGC
TGAATTGCTGCAGGGTTTACAATCACATAATACACAAAAGATACATATTT
GCTCCACACTTGCACTTTGTGAAACTGTTGCAAGGGTCTGGGCGCCAGCC
ATTCGGCGCCAGCAGGTGACCTCAATACGACCTTCCCCAACCGAATTCAG
GTACCCATTCACACCTGGGTGGAGTGAGGAAAGTCGTACGTGTTAAGTGC
CTTTCCCAAGTGGTACTGTTTGTAATATAAGACATGATGTGGTGATTATC
ATGCTTCATCTCAATATGAGCATGGTTGGTTTACTGGATATCATTATTTT
ATCACACTAGGACATGATTAACCGCTGCAAGGTCCATGGAATCCGTAAGA
GGGCGCTGTTACTGGTGCTGACGCTTATGGTAGCCACGGTGACGTATCAG
GCATGGCGGTCGTTCGACATGTCTGCTGTGGCACAGACTCACGGTGAAAC
CCAGAACAAAAGGTTTGTCTTTTTTTTTTTTTCTTCTTTTTTTTAAATAT
AAATCCGTTTATTGAATGTTGTATATTGTCCAGTTACCAGGGCTAACCAT
TTGTAATAGCTAGTTGGGTGGCACTGGTTGTATATTTTTCTACTTTCAAA
TCAATCAATCAATCAATCAAATTGTCGCCCGAACACTGATGATCACAGAT
GCAAAAAAAATAAGAAAATAAAAAACAGATTTTCGAATTGTTGCCATACG
CTAGACCCTACCTTATAGGCCGAATAACGACCACGTCGCACGTTAAAATC
AGACCTCCTTGTTCGCACGCATGGGTTTGGACACGGTCAAAGGTGCAGGA
AGTCTGTATCGCCCCCCGCCCCGGGAGATCGATGACTTGAAAGGTATGAA
TAAAGTTTACGTTCATTTCTTTTTAAATGTAGATTCCGCCTTGACTTGGC
TGCCGGTATCAACGCCCCCTGGCGAAGAGTTCAGGAAGATACAAGTGACG
TCATGAAGGACCGAGCCAATAGTAAAGGTGCATTCAATGACGTCATCAAC
ATCGGCGTTGGACGCAAGGTCATGGGTGAGTTTCATGTATCAAAAAACGG
CGGGAAAACGGAATACGACAGAAAGGACGTTAGGAACACTGCACAAAACT
GCCGACCGAAAACGAACGTTGTGTTTCTGAAGACGCACAAAACGGCAGGC
TCTACGGTACAGAACATACTGATGAGGTACGGACTGGCCAGGAACCTCAC
ATTTGTTCTACCCTATGAAGGGCATCTTCTGGGCACTCCTCACCCCTTTT
CCAAGTCAGCTGTCCTCCAGGAGCGTCTCCATGGCGACCAAGATCATCCC
CATGGCAACCGCACGTCTTACAACATCCTCTGCCATCACACACGCTTTCA
CTACGCCAACATCCGGGACCTGATGCCAAACGATACCATGTACGTCACCA
TAGTAAGGAACCCGGTAGACATGTTTGAATCGTCATTCCAGTACTACAGA
TTCGGTCCGCGGTACAAGATCTCCTCGCCGAACGCCTTAAAGACGTTTCT
CGACAATCCTTCGCATTACGTCAAGAAATTCGGGGAGAAACCTTATTCCC
ACAATGCCCTGTTCAACGACCTTGGGTACTACAGCGAGAACCTGACGTCA
CAGCAGACGATAAAATCCGCGATTGACCAAATTGACCGGATATTTTCCGT
TGTCATGGTAGCGGAATACTTTGAAGAATCCGTCATCTTGCTGAAACACG
CTCTGTGTTGGGACGTCGATGACGTCACATTTTTCAAAATCAACTCCAGG
AACGAAAAGTCAGTACGTCACGTGACTACAGAAATGGCGGGAAAGATACG
TCAGTGGAACAAGGCTGACGTCATGTTGTTCGATCACTATAACAAAACGT
TGTGGTCGAAACTTTCCCGCCTTCCAAAGACATGGCGAAAAGAAGTGGAG
GAACTGAAAGAACGGAACTTGGAGCTGAGAAACGCGTGCGTGAAATCTGA
TCAGGCGACAAGCGAAGAAGTGGAAAAGGAGTTGCGAGGTTTTCAGCCGG
AGGGAGTTTCTATCAATGGCTTCGTTTTGAAGGACGTTGCCAAGGACAAC
CCAACGTGCCGGAGGATGGTGACCCCGGAGGTCCCGTTCACAGAAGAACT
CAGGAGAAGGGAACTTCGTAAACTTGGTATCAACTGAAACAACCCGAATG
AACGAACATTACTCACTTTCGTTCTGTTATATGTTTCTGTAATACCATGT
ATGCATAAGGTTAAATGTTTTTGGATTTGTTAGGACTAATACTTCTATCA
CGTAATCTGTATCTTTCTTATATTTTGCCTGACCTCTATCTGTTCTCTTG
TGACCTCAATGAAAAGCGTCCAGCAGGCCGTTTTTTTCTTAACGAAGGCT
CAAACAAATAAATATCATGGGTAGGTGAGTGTAGCTCCCTCCAGGAGCGA
TAGCTGAGTGTAATGGGTTCGAATCCCAGTTACTGTGTTACTTGGCTACA
ACGGAAACTTATTGTTAGTTGATTTTGACTTGCGCTGTTGTAATCTATGT
ACGCACTGTACACGTGTTATACATATAACAGAGTAGTACAATTTAAACTT
TACTTCTGGACAAAATTACGATAAAAATCGGACGTTTCGGGTGCCCATCC
GACTGCCCTTTTTCAACATTCTTCTCGTTGAAAAAGGGCAGTCAGATGGA
CGCCCGAAACGTCCGATTTTTATCGTTATTTTGTCCAGAAGGAAAGTTTA
AATTGTACCACTCTATTTGCTTACCTGGATGTTTAACATTCATAAACGTA
TACATATAACGCTACACGTCTTTATCATTATGACAATGGCACAAACCAAC
CAATGAGAAAATAGATATCTAAACTAGGTGGCTGATATATCGTTAGTTTA
GCACCTATTGCATGTATTAGATAATTTAGCTAATCAAGTTCCGCCAAAAA
TTTTTTTAGTATTGCGGTCAAGCTATCTAAGGGTCAAATGACATTATTAT
CTTTTTTTATTGATATTAGTGCAACTTTAAGAAAATGCTACCTAAAAGGT
TTTCATAAATGTAAAATGTTTACTCAAAAAGCCTAGAATCCTTCACCCAA
GCCAGGCTGAGAGGTCAAAGACGAAGGTCACGCGTTTGGAGTTCCAGGAA
CTCCACTTGCTAGGCAACCCTTCGACGCGTGCAGACAGACAGGCACTGAA
TAATTTATTTCCAGGCCAGCCCGACCTTAATGACTTACCGCAACAAGACA
TGATTCAGCGGAAACAGAAGGTTACTAGCGGCCACCAGACGTCTGCAAAA
CTTACAGGAAAGTCCCCTTACTTAAGCCCCCCTCTCGCTGGACCCGCGGC
AGGCTGGCGGCGTCGCTGCGGCAGATCGAATTGACAAAGCACTCAACGAA
TTTCATGGACAAAAAAACAATCTTTTAAACCTTTGTGTGTTTTGTTGTCC
TTTTGGTCATACTTATACTTTTTTAATGATATTCCCATTATAAAGTCAAG
GGTAACACAAATCTAGTTTAGCCTACGGGCAGGAATTTGCAATAAACTTT
CCTATAATCCAACAAAACAAGCGTCCGTGGGTAGTTTCAGCCTTGAAGTG
ACACGTGCCATGATGGCCTTCGGGTGTCCATTTCTAAGAAATGGTGGGCA
ACAACGGAGCCGTGTAATATCCGCATTGTTCATCGTCAGTCAACGATGTA
ATGCCATTCCACTTGGACGGCTCCCTCGCCGCACGCTCTCTGACAATCAA
T Coding sequence (CDS) from alignment at Sc0000003:1364320..1369570- >Blg01001.0 ID=Blg01001.0|Name=Blg01001.0|organism=Branchiostoma lanceolatum|type=CDS|length=1404bp|location=Sequence derived from alignment at Sc0000003:1364320..1369570- (Branchiostoma lanceolatum)
ATGATTAACCGCTGCAAGGTCCATGGAATCCGTAAGAGGGCGCTGTTACT
GGTGCTGACGCTTATGGTAGCCACGGTGACGTATCAGGCATGGCGGTCGT
TCGACATGTCTGCTGTGGCACAGACTCACGGTGAAACCCAGAACAAAAGA
TTCCGCCTTGACTTGGCTGCCGGTATCAACGCCCCCTGGCGAAGAGTTCA
GGAAGATACAAGTGACGTCATGAAGGACCGAGCCAATAGTAAAGGTGCAT
TCAATGACGTCATCAACATCGGCGTTGGACGCAAGGTCATGGGTGAGTTT
CATGTATCAAAAAACGGCGGGAAAACGGAATACGACAGAAAGGACGTTAG
GAACACTGCACAAAACTGCCGACCGAAAACGAACGTTGTGTTTCTGAAGA
CGCACAAAACGGCAGGCTCTACGGTACAGAACATACTGATGAGGTACGGA
CTGGCCAGGAACCTCACATTTGTTCTACCCTATGAAGGGCATCTTCTGGG
CACTCCTCACCCCTTTTCCAAGTCAGCTGTCCTCCAGGAGCGTCTCCATG
GCGACCAAGATCATCCCCATGGCAACCGCACGTCTTACAACATCCTCTGC
CATCACACACGCTTTCACTACGCCAACATCCGGGACCTGATGCCAAACGA
TACCATGTACGTCACCATAGTAAGGAACCCGGTAGACATGTTTGAATCGT
CATTCCAGTACTACAGATTCGGTCCGCGGTACAAGATCTCCTCGCCGAAC
GCCTTAAAGACGTTTCTCGACAATCCTTCGCATTACGTCAAGAAATTCGG
GGAGAAACCTTATTCCCACAATGCCCTGTTCAACGACCTTGGGTACTACA
GCGAGAACCTGACGTCACAGCAGACGATAAAATCCGCGATTGACCAAATT
GACCGGATATTTTCCGTTGTCATGGTAGCGGAATACTTTGAAGAATCCGT
CATCTTGCTGAAACACGCTCTGTGTTGGGACGTCGATGACGTCACATTTT
TCAAAATCAACTCCAGGAACGAAAAGTCAGTACGTCACGTGACTACAGAA
ATGGCGGGAAAGATACGTCAGTGGAACAAGGCTGACGTCATGTTGTTCGA
TCACTATAACAAAACGTTGTGGTCGAAACTTTCCCGCCTTCCAAAGACAT
GGCGAAAAGAAGTGGAGGAACTGAAAGAACGGAACTTGGAGCTGAGAAAC
GCGTGCGTGAAATCTGATCAGGCGACAAGCGAAGAAGTGGAAAAGGAGTT
GCGAGGTTTTCAGCCGGAGGGAGTTTCTATCAATGGCTTCGTTTTGAAGG
ACGTTGCCAAGGACAACCCAACGTGCCGGAGGATGGTGACCCCGGAGGTC
CCGTTCACAGAAGAACTCAGGAGAAGGGAACTTCGTAAACTTGGTATCAA
CTGA
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg01001.0-exon-Sc0000003-1570713199:1369537..1369570 | Blg01001.0-exon-Sc0000003-1570713199:1369537..1369570 | Branchiostoma lanceolatum | exon |
| Blg01001.0-exon-Sc0000003-1570713199:1367559..1367710 | Blg01001.0-exon-Sc0000003-1570713199:1367559..1367710 | Branchiostoma lanceolatum | exon |
| Blg01001.0-exon-Sc0000003-1570713199:1364320..1367138 | Blg01001.0-exon-Sc0000003-1570713199:1364320..1367138 | Branchiostoma lanceolatum | exon |
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000003 | genome | Sc0000003:1364320..1369570 - |
Properties
| Property Name | Value |
|---|
| GeneID | Blg01001 |
|
