Blg00997.0 (mRNA) - B. lanceolatum

Overview
NameBlg00997.0
Unique NameBlg00997.0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000003:610183..613862-

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg00997.0 ID=Blg00997.0|Name=Blg00997.0|organism=Branchiostoma lanceolatum|type=mRNA|length=3680bp|location=Sequence derived from alignment at Sc0000003:610183..613862- (Branchiostoma lanceolatum)
CTTAGTCCATGTTGGTGGGTAGAAGTACCTTTTTTTCTGCAAAAGGATGA TTTTGGTGAGATGAAGTAAAATGTGCTTTTCAAGCTCAAGTTGCTTTGTC TGAATAGGCATGGTGGTGTTGGGTAACGGCGGGAGTGTTGAGGCAACAAC GCGTTTACAAAGACGCGTTCATATAATGTTACGTGCTGCGAACTTTGAAT GTTTGGACGCAGATCAAACATTGTACTTCCTCAGCTCAAGTAGCTCAATC TGAATAGACCTGGTGGTGTTAGGTAACTTAGAAGTGTTGATGCAAAGCCA TGTAAACAAAGACATGTCCGTACAAAATTACGTGCTGCGAAGTTGCAAGG TTTGGTCAGGCTGCCGGACACGTTTTAGATTGTTACGACTTCAGCTCTAG TTGCTCTGCCTGAATAGACCTTGTGGTGTTAGGTAACTGGGAGTGTTAAG GCAACACTGTTTACAGTCACGCGTCCCTACAAAAAATACTTACTGCGTCA TTACAAGGTTTGGTTCAGGAGCCCCACACACAGAGTAGATAAGACGGCTT TGAAAAGTCTTATATCTTCCAACAGGCGGAATTAAACGACTGAAGATTGT GCTGGGACTTGTTTAAAGCTTCTAGAAAACAGCTTCTCGGTAAGTTTCTC GTTTATATTTACTAGAACAGGCAAGATGCAACGTTAACATTACGCTTGTC TTTGCAATTGGTGGGCTTAGACCATTTTGTCAGCCATATGTTTCTGCGTT TCTGTACTCTACTGAAATACATTCAAGATGTTTCCACGGAGACTTCACTA TCACTATTTGGGAATTCGTATTCAGTTAATACAAATACAACATGTAGAAT GTATAGTCATAATCATTGTTGAAGTGAACTTGCACATAAAACCGCATTTC CACCTAATACAAGACATTGCGATGTGTATCATCCTGTAATCATTAAGGCG GGTGAACCAGAGAATGCTATAGAAGCTTAGATTCTGTCATCTTAAATGTC CTAGAAAAATATGCATGAACATAACAATAGCTGTGAATCATTGGGCCATA TTTCTTATCAACTATGTAGTCAACATGTTAATCAAGACGAAAAGGATGCT GGTTCTTCTGCTGATCATCCTGAAGGAAACTGGACCGACCGCGGCCTGCA GCAGCAGCTGTTCATCACGCTGTGACTGCAGCGAGAGAGGCCTCAGCAGC GTTCCTCAGGACCTGCCCACATCCATCACTCATCTTCACTTGGAGCGAAA CGTCATCACAACCTTAGGTCCATCCGACTTCTTCAGTTACAACAGCTTGA CTCACTTAGATCTTCAAGACAGCCAGGTTTCGGTAATCAACAGTGGTGCG TTCGCCTATCTAGACAGGTTAACTCACCTGAAGCTTGACTGGAACAAGTT AACCAGCCTCCGAGCTGACATGTTGACGGGACTTGTAAACCTACAGTACT TTGAACTGCGTGAAAATCTGCTAACCAGTCTCACGGCGGATTTGTTTGTG AGACTTGAAAAGTTGTTGTACCTTGGCCTGGATCACAACAGCATCCACAG TATCGAGGCAGGAACATTCAGTGCCAACCCGCAGCTCCAACACATTGACC TTCAGCACAACAACATCAGCAACATCGCAGCTGAAAGATTTGTAAATATG ACCAGACTCAAATTCTTGGACCTGAGTGTTAACAAGATAAGCACCATTTC AGCTCGCGCATTTGCGAATCTGCCCCGGCTCGAAGTGCTGGACCTTTCTT ACAACAGCATCAACATGTTTCCTGCTGATCTCTTGTCAAATTTGAACCTG GATTCTAGATTGCATACTCTTCGTGTTGACATGAATGACCTTGAGACACT ACCAGTGGAGGCATATGATATTCTGGTCTCAACAGGAGATGTACACATTC TAGACAACCCCTGGCAGTGTGACTGCAGGATGCTCCCCTTTAGGCAAAGA ATGGCCGGGTCTCATTCATTCGAAAGCGAGATCAGTTGTTCTGGACCTCC CAATCTGCCAGAAAATAGCTTGCTACATGACCTTAATCCTGGCGATCTAA TTTGTGAGAATACAACAACAACACGAGAAGTTTCTGACCCAACAGCTGAC CAAACAACTCCCCAAACAACTGTCCAGCCAATTCCCCAACCAAGTCCCCA AACAACTGCCCAACCAGCTGACCAACCAACTCTCGAACCAATTGTCCAAA CAACTGCCCTAAACAACTGCCCAAACAACTTTCTAAACAACTGCCTTAAC AAATGTCTAAACAACTGCCAAAATAACTACCTAAACAACTGTCCAAACAA CTGACCAAACAAGCCCTCTAACGAAACAACTGCCAACAACTGACCAAACT GCCAACAACTGAACAAACTGCCAACAACTGACCCAACGACTGACCAAACA ACCGACCACAAAACTGTCCAAAAAAACTCCCCAAACAACTGCAAAAAGGA AACTCCCCGAACAACTGCCAAAAAAAACTGCCCAAGACTGCCCAGACAAC TGACCAAACAACCATTCCATGTGAGTTCCACTGCCGTCCATAAAGGTGCA CGTGCTGCTGATGCTGTAAACAAATACGTAACTCTTAGCAGGCATTGCAT TTATCAGCAAACCTGCCTATTTGGTCTACCTAAGGGTCTGTCTGGGTTGT AGGAAAAAAGACGGCCAATGTCCCCTCCCCCAAATAAATTAGAAGTTGAA ATTGAACCGAGATAGAAGTACGACATGTTCAAATATCCCAGATAAAGGAA AACTAGATTAGGACTTTGTAAAGATTGGAATTTTTCACGATCTATAAAAT TCCGGAACGTTAAAACTGTTTTATCATCATTTTGATGAAATCTGTATCTA TGACTACGGCGTTCATCTATTTTGAGAGAAAAACGGAATATCATTTTTGA CTGCTTTGATATTTGTGTGAGATTGAGAATTCGTACACTTTAAGAGAGAG AAAAACGTATCTTTCATTGTTGTGATATTTTCGTGAGACTTTATAGAATT ATATGTATTTTGAGCAGAATCGCATTTTTGTAATGACGTGATATTTTCGA GAGACTTTGGAATTCAGCTGCCAGTTGATATTCCGTTATAGAATAATGTG TTTAGTCAGTACTACACTGTCTACTGCGTTCTGAAGTTTGTATTTTTATT GTTATGATGTTTGAGTGAAGCTTTAGAATCACTTACCATTGTGTGGAATA ATGTGTTTCGCCAGTAATAAACTTAATCCTGCGTGATGAAATCTTCAAAT GTTTGTTTTACGACGGAGTCTCCAGCAATAGTCAGCTGGTTACAAGGTTT CATATGTTTTGAAAAAATAAGTGATCTGTGTTTGTATTGCTGTGATGCTT GCGTGAGACTTTAGAACTCACTTGCCATTGTTTTCTCGACTAAGTTCTAT GCTGTATATTATGTGCTGAAATTTCAAGCTCCGACTTTGGCTCGATACAA GCCTTGATATGTTTTGAAAGATAAAGCCATATTTATTTGCATTGTTGTGA TGACTTGGAATACTTGTGACATGCAGAATGATGTGTTTTATTGTTTTCTG TGCTGTGAAACAAGACAATATTGAATTGTGTGGTAGAAGTTTCTGGTGTG TCAAGACGAAAGTTGCAGCTATAACTACAAAATGCTGCTCTTGGTATCGT TCCAAATAAAAACAAAGGAAATTGAATGTA

Coding sequence (CDS) from alignment at Sc0000003:610183..613862-

>Blg00997.0 ID=Blg00997.0|Name=Blg00997.0|organism=Branchiostoma lanceolatum|type=CDS|length=1230bp|location=Sequence derived from alignment at Sc0000003:610183..613862- (Branchiostoma lanceolatum)
ATGTTAATCAAGACGAAAAGGATGCTGGTTCTTCTGCTGATCATCCTGAA
GGAAACTGGACCGACCGCGGCCTGCAGCAGCAGCTGTTCATCACGCTGTG
ACTGCAGCGAGAGAGGCCTCAGCAGCGTTCCTCAGGACCTGCCCACATCC
ATCACTCATCTTCACTTGGAGCGAAACGTCATCACAACCTTAGGTCCATC
CGACTTCTTCAGTTACAACAGCTTGACTCACTTAGATCTTCAAGACAGCC
AGGTTTCGGTAATCAACAGTGGTGCGTTCGCCTATCTAGACAGGTTAACT
CACCTGAAGCTTGACTGGAACAAGTTAACCAGCCTCCGAGCTGACATGTT
GACGGGACTTGTAAACCTACAGTACTTTGAACTGCGTGAAAATCTGCTAA
CCAGTCTCACGGCGGATTTGTTTGTGAGACTTGAAAAGTTGTTGTACCTT
GGCCTGGATCACAACAGCATCCACAGTATCGAGGCAGGAACATTCAGTGC
CAACCCGCAGCTCCAACACATTGACCTTCAGCACAACAACATCAGCAACA
TCGCAGCTGAAAGATTTGTAAATATGACCAGACTCAAATTCTTGGACCTG
AGTGTTAACAAGATAAGCACCATTTCAGCTCGCGCATTTGCGAATCTGCC
CCGGCTCGAAGTGCTGGACCTTTCTTACAACAGCATCAACATGTTTCCTG
CTGATCTCTTGTCAAATTTGAACCTGGATTCTAGATTGCATACTCTTCGT
GTTGACATGAATGACCTTGAGACACTACCAGTGGAGGCATATGATATTCT
GGTCTCAACAGGAGATGTACACATTCTAGACAACCCCTGGCAGTGTGACT
GCAGGATGCTCCCCTTTAGGCAAAGAATGGCCGGGTCTCATTCATTCGAA
AGCGAGATCAGTTGTTCTGGACCTCCCAATCTGCCAGAAAATAGCTTGCT
ACATGACCTTAATCCTGGCGATCTAATTTGTGAGAATACAACAACAACAC
GAGAAGTTTCTGACCCAACAGCTGACCAAACAACTCCCCAAACAACTGTC
CAGCCAATTCCCCAACCAAGTCCCCAAACAACTGCCCAACCAGCTGACCA
ACCAACTCTCGAACCAATTGTCCAAACAACTGCCCTAAACAACTGCCCAA
ACAACTTTCTAAACAACTGCCTTAACAAATGTCTAAACAACTGCCAAAAT
AACTACCTAAACAACTGTCCAAACAACTGA
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg00997.0-exon-Sc0000003-1570713199:613224..613862Blg00997.0-exon-Sc0000003-1570713199:613224..613862Branchiostoma lanceolatumexon
Blg00997.0-exon-Sc0000003-1570713199:610183..612793Blg00997.0-exon-Sc0000003-1570713199:610183..612793Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg00997.0Blg00997.0-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000003genomeSc0000003:610183..613862 -
Properties
Property NameValue
GeneIDBlg00997