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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000003:6038646..6046716- Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >Blg00977.4 ID=Blg00977.4|Name=Blg00977.4|organism=Branchiostoma lanceolatum|type=mRNA|length=8071bp|location=Sequence derived from alignment at Sc0000003:6038646..6046716- (Branchiostoma lanceolatum)
CTCAGGTAAAATCTTCAGTGGAACAGGTGATCTGCGGACGACAACAGCTA
ACAACATCTTTAACAAGTGTTACCAAAAGGACGACTGAGAGAACCAAGGC
GTCAACTATGTCTCTGGATTCCTCTTTGGAATTTTTCTCCCGTCGGTACT
CATTAAAACCAGAGTTTCCACTTGATCACGTGACTTCTCTTCTATTGTGA
TAATTGGTGGAGATAAGCTGAATCGTTTGCCATAAACTTTGGAAATTGTC
AAATTGGAATGTATTGCACCAATTTGGCAAAATTGGCCTCGTGTGGGCAG
TCGGACATTTCCCTCGCAGATTTGGACAAACGGCAAATGATCAACTGGTT
TTGACCAATTAGCACAGTAGAATTAGAGTTGTGGACACTTAAACTATAAC
TGTTATGAGTAGAAGCCATGTGATCAAGTGAAAACGGGAGTTTTACCGAG
CAGGTGATATTTCCCAAGAATACTAAAGCGATTTTCGCGCTAACAAAAAT
ATATTGTCCATACAGCCGCCATAGATACAAGTTATGTGACTGGGTGAAAA
CAGTAATGTCGACAAATCTGAAGACAGCAGTGCTAACAACAACAATTAAA
AATATATTGCCCTCTGGGGAAGTGAATTAGGAACCATTACGTCCCGCCCA
ACTAGTATAATTACGCCCACCACTCGAAAACAATATAAGTCAGGCGACTC
AGGTAAAATCTTCAGTGGAACAGGTGATCTGCGGACGACAACAGCTGGCA
ACATCTTCAACAAGTGTTACCAAAAGGACGACTGAGAGAAGCAAGGCGTC
AACTATGTCTAAGGTAGAATTTGACTTTTCACATTGCTGGTCATGCACAG
GCTCTGAAGAGGAACAGTGTTAGGTATCGAGATAAAACTATGAATATTCC
GGCGCTAGATTCTTCAACTAGAACAACATTACCGATCGATTTAACCCTGT
AAAAGAACGATCTGAATCCGTTTAATACGCAGGACACTGGTTTGTCGTGC
GGTAAAAAAGTTTATTTGCCAAAAGACAAAATGCCAATAAGCATAATTGT
TGTTTCCTTATCAGTGCACAGTTAGGATCATAGTAGACTAGACTTATGTT
TTTTTGTTAAGGATAAGCTAGTCCATTCCATGATAGCTCAAATATGATGT
TCAATATGTGGATTCCCAGAAGATCTAAGTTTGTTTTAGTATATGTAGAT
GTTTTGCCGTGTTCGTCACGGATGAGAACAAGATTGAAACCTATTATCAA
CACGCATGCTTTAGCTTGAAAGTCCAGTTGTCGACGATGGACGCCCATTT
TAAGATGTAGTCTATTCAGCTTAGATTACCACTCAGAGTTTAATGTATCC
TCCGGACTTCGTGACAGAATTCCTCTTACTTTCTTTGCTTTTTTGCTCCT
TGCAAACATCTTAATATATGCTCACTTTGCAATCGAAATTAACCCTCTCT
TAAACTTAGACATATGAAAAAAAGAAGGGTGATGCCTTTGTTTAACAAGC
ACCATTATGTCTAGGGTAGGGTTTGACTTATCAAATTACTGGTTATGCAC
AGGCACTGAAGAGGAACAGCGTTAGGTATCGAGATAAAACTATGAATATT
CCGGCGCTAGATTCTTCAACTAGAACAACATTACCGATCGATTTGACCCT
GTAAAAGAACGATCCAAATCCGTTTAATACGCAGGACACTGGTTTATCGT
GGCGTAGAAAAGTTTATTTGCCAAAATACAAAATGCCAATAAGCCTAACT
GTTGTTTCCTTATTCGTGATCATAGTAGACTAGACTTGTATTTCTTTGTT
AAGGACAAGCTAGTCCATTCCATGATAGCTCAAATATGATGTTCATTATG
TGGATTCCCAGAAGATCTAAGTTTGTTTTAGTATATGTAGATGTTTTGCC
GTGTTCGTCACGGATGAGAACAAGATTGAAACCGATTATCAACACGCATG
CTTTAGCTTGAAAGTCCAGTTGTCGACGATGCATGTCGATGAAACATGGC
ACGCCCATTTTAAGATGTAGTCTATTCAGCATAGATTACCGCTCAGGGCT
TAATGTACCCTACGGACTTCGCGACAGAATTCCTCTTACTTTCCTCTTAC
TTTCTTTGCTTTTCTGCTCCTTGGAAACATGTTGATATATGCTCTCTTTG
CAATCGAAATCAACCCTTTCTTAAACTTAGACACATGAAAAAAAAGAAGG
GTGATGCCTTTGTTTAACAAGCACCATTAGTTGTATCTTTAAACTTTTAA
TAAACGTGTACTGATATTTTTTATTCTGTAATTGCAGGAGAAGTTTGTGC
GTACCAAGCCCCACTTGAATGTTGGAACCATCGGCCACGCGGATCATGGA
AAGACCACGCTTACTGCTGCCATATGCACAACACGTAAGGGACTTTTAAA
ACAAGGGTCCATAATGATTGTTAATTATTATTTCTATAACGGTGAGACTA
CATGTATCTATTCCGTTGTCTAACTTAAGAAGTCTATTCTTAAACTCACA
CTGGATTTCGTTCGAACGCCTACCTATAAGTAAGTTCTAGCTTGGCAAAA
ACTAAAAAAAGACCGTTCTCTCTCTTCCTAACTTTCCATATCCCTATTTA
TAATTAGTTTGTTGAAAATAGGTCACAGTTCGTAACACAGTACATCGATT
TTTTTGTTCATCTAGTGGCTAAACGGTATGGTGGCCAGGCAAGAGACTTT
GATTCCATTGATAACTCTCCCGAAGAAAGAGCTCGAGGAATAACCATCAA
CACTGCACATGTAGACTACAACACTCCAACAAGGCATTATGCTCATATTG
ACTGTCCGGGACACGAAGACTACGTCAAGGTAATAACCCCTTGTTTCATG
CATAGAATTACGTCATACGTGTAGTGCAGGTTAGTGTCAGCACACATGGT
AGACATTCTTATCGGACAGTCATGAATGTTTCGTGCAGACTATACCTTTC
TTTTGACGGAAAATGTTGTCTGAGAGACTTGTCGTTTTTTAAAAAATGGC
AAAAAATACGTCGTACGTATATGTACACGCGCGCGGCTTACGTTTTTTAT
GCTTTTTGTGTCTAACACACCAACATCAGAGACTGAACGTCATCGTCATG
CTAACGACCAGGTATCTGCCTTGAACTTTAGCCGTTATAGGTCGTAAACT
TGCATATTCTATTAAATGACCTATGACTATGTACAGTACTGTTAAACATC
CAACACTATCATATTTCCAAGAACATGATCACTGGCGCAGCAAAGATGAA
CGGGGCTATTCTGGTTGTATCCGCTGCGGACGGACCCATGCCGCAGACCA
GGGAACACATCCTACTGGCCAGACAGGTGAGTTGAAACACAACTTGGCAA
CTGTAAAAGCCTTTATGAATACCGTTCCTAATTAGTATCTGAATCTTTGA
AACCTTTAATAGAAATTAAACATGTAGCAACTTTAATTACCTTCGATGCA
AGTGGGAGTTCGTACATACTGGTGTTCATGAATATGTGTGACATGGTTTC
AGGTGGGCGTTCCGTACATAGTGGTGTTCATGAATATGTGTGACATGGTT
TCAGGTGGGCGTTCCGTACATAGTGGTGTTCATGAATATGTGTGACATGG
TTTCAGGTGGGCGTTCCGAACATAGTGGTGTTCATGAATATGTGTGACAT
GGTGGACGATGAAGAACAACTGAAGCTGGTGGAGATGGAAGTTAGGGAAC
TTCTCAGCGATTATGACTTCCCTGGGGACAGCCTCCCGGTCATACAAGGA
TCTGCATTAAAAGCCCTTGAGGTAAGTACATACAAACATACACTGCTGAA
TTACGTTGATCTTACGAAACAAATCGTTACACACAATATTACACATCGTT
CATGATACGCACAACAACTATGACGCAGTCTGCAATTGTCTGTTGTACAG
ACGGATAGTTTAGGGTAGAAATGAATTGTACAGTCTATTTGTCCTAGCTA
ATTCAGTTATTTCACTTCGGAATGTTCGTTACCCTTGGTAAGCACGTATG
TGGTGAGTTGAAAGACCAGACTGTTGTTGGAACAAATTAGAACACATGTG
TGACACCACGTATACTCTAGGGTGTGCAAGAGTGGGAGGAGAAGATCGTT
GAGCTGGCGGCGGCTCTTGACCGCTACATCCCTGAACCTGAGCGGGCGGT
AGACAAACCGTTCCTGATGCCAGTCGAGGACGTCTTCTCCATCCAAGGTA
AGTGTATTAGTAAGTGCCTAATAGTATGTTCAATTCAATTCAATGTTGAG
TAATATGTGAAATAAGATGCATAAAAGCACTGACGAAAACATACAAATTG
CTTGGATATCAATAGAAAATATCCAAAACTTAAGAGAAGCTTGTGGCTTT
GTATGTGTTTATTTGAATATCCTATCAAGCCACATTCTGTTAGCTAATGT
CGTTGGGTGCCATAAACAGAATTAACACGTTACTAATAGGACTGAACCAC
TTTTTGAGTTGACTTTGTATGCCTCCTATGCCATCATCACTGGCAAGAAC
ACAAAACATTAAGCATTCTCACGTGAAACCAGATTTTGAGATGCTGTTCG
TCTGTAGATTGGGTAATAAATTTAGTGCACTACATCTAGAAACAAACATA
TTTTGTTTTACAGGTCGCGGCACAGTTGCGACAGGCAGGATTGAACGTGG
GATCATCAAAGTTGGAGAAGAAGTGGAAATAGTTGGGATCAAGGAAACAA
CTTCAACGGTTTGCACAGGTTAGTAAAGCAACCATGACATNTGTACGACT
TGCACAGGTTAGTAAAGCAACCATGACATTCTCATTCGTCACTGAGAACC
TTCCTGTCACATTGTTTTGCTTTTTTAAAAGAGTGAGATGAATTACTGTT
CGCAGGCGTTGAAATATTTCGGAAACTGCTGGATGACTGCAGTTGCTCCA
CCATACCAAGCAACCATTCATCAAAACGATGTCCTTGTCACAGAACCTAC
CTGTCAAATTTTTCTGTTTTTCTTTTTCGTAGAGAGTAAGTTAATTCAAT
TACTGTTCCCAGGTGTTGAGATGTTTCGCAAACTGCTGGACGAAGGCAGG
GCTGGTGAAAACGTCGGTGTTCTGCTGAGAGGTACGAAAAGGGATGAAGT
GGAACGAGGTCAGGTGTTGGCCAAGCCTGGAAGCATCACTCCTCATACCA
AATTTGAAGCTGAGGTGAGGTGTAGTGAGTGTGGCTTTCAGATAAGGGAT
ATCGCCTTGTACTAACACATTGTGAATCCGTGCTCGCGCTGTGCCACCAT
GTTGGCATACAGAAGTAATTTAAAGGAACAGCTTTCTTACCTAGGGCAAG
TCATAAAAGAAATGTTCCTACTGTGACATGTCCAACAGTTTGAGGGGTGG
ATTGATCCCCATAACCACATAAATTCATAAAAGGATTAGACTGTCTTCCC
AGCCAAGAATAATGGCAGGGACAGATTACCATAATAACTATCAGAAAATT
CAATTTTTCTAGATCTCTGTACTGGTTTCCATAGGAACATTGCCAAACCA
TGCAGAATAGATTAATTTTTTATATAGTTTTACTGGGGTCTTTGAATTAA
GTTATACACTGAATCAGGTTCAACGAGTTGTGAAGATGACATCTTAAATC
TACGTTGTTGTTCATGTACTGACACAGGTGTACGTTCTGAGTAAAAAGGA
AGGCGGACGTCATACGCCGTTTTTCAAAGGATACCGACCTCAGTTCTATT
TCCGGACCACGGACGTCACAGGAGACATTTCGCTTCCCGAGGGGGTGGTA
AGTTGTGCAAACATAAGTCGTCATGTTTACCTCTATTTAAGCAAAGCGCC
GTTTCTTCCGTTGCTTCTCTCTCATAGTCATAGTTTGAGCTTTTGTCCTT
AAGATATAGATTGAAGCCGTGACCTCGTGACCCAATAGTCACATTGTGGC
AAATCTTAAGACGAAAACATACAATTTTATCTTACATTACAAGCATACTA
GACGTGTCGACGGGGGCCCATTGAGGTACAGACAATCCTATTAAGTATTA
AAAAAGCCTTACAAATCGGTTTTCCCGACCTTTCTTACTGAGATACAAAC
CTAAACCACTAACAAGTAATCATGCAAACCGTCTCAAGACCTGTCTCAAC
TTCTGACGAAAAGTTCAGATATGAATAGAGTGACGAGTTACTGACACTGT
TCTTGCTATATCTAATGGAAACGATATGGCATAATCTACTTCGCTGTATA
TAACTTCGTGAAGATTGGTTTTTGTTTGAAAGATAATCTGAGATTGTTAC
TGAAATGCGGAAATATACCATCTTGTACTATGCCCATGATGCTCCGGCAC
CCTACATGTTAGAAAATAATTAATAAGTTTGCCTTTCTCTGGCTTTCCAC
AGGAAATGGTGATGCCGGGAGATAACGTCCCGATGACTGTAGAGCTGATC
GCCCCCATCGCCATGGAAAAAGGCCTGCGGTTCGCCGTCCGTGAGGGGGG
CCGGACAGTCGGTGTCGGGACCGTGGCTAAGATATTCGACTAGGATTAAA
GGTACTTAGAGCCTTATATCGATCTATCATTTCTAATCTTCACCTTTTTT
TATACATGCTTAGCTGTATGCATTTGCGTATATGCTATTCTTAAGCCACG
TGTAAGCATGCTTAAACGGTGAAATATATAGGAAAGAAGACAATGTTGCC
TCTTATGTATAAAGCCATAAGATTAATTCAATATTTGCACAAAGGCTGAA
AATGTGTGCAGACAAATCTTAATGAATTCTAATGAAGTCTTTCCTACTAA
TGTAAACGTTGTTGAAATATTCTCCCTGGACCCATACCAAAATTGAAGCA
CAACATGAAACTCAAAGCACACAAAANTGAAACTCAAAACACACAAAATT
GAAGCACAACAAGAAAACTCAACATGTAGTTCGACGATGCCCCTTCAGTT
ATAAAAATGACACCTGTATTGTTCAGTAACATTTGTAACATTTTTCATTT
ATGGACATATGTGCTGTATCCGACCGACAAATCTATGTACNGCTATGTAC
AGATAGTTCCTTAAATTACTTGAAATCTGCTGTTCTGATTTTTCAGGCTT
TTCGGGTGACAGAGGACTCCCTCCGGCCGGTAGCTGCCTCGACTGCTGAG
CTGTTTGATCCCAGTAACTAGTAGTAAAGTAGAGTGGCATGTAGTCAGTT
GGGTTATGGGTGCTTTCTAGCCAGATATCATCTATATTATGAGCGTGTTC
ATTCGTTACTATCGTCTCCATGCATATCTTTTTCTAAGATTTAAGCTTTG
TACTTTGTGGTAAACAGAATAATACAATGTTCTTCACCACTGACATTGTC
TATCAGAATGTCTTTGATTGCAGTAGTCAAATAGTCTCTGCGGTCTCTAT
CATTAAAGTACATATTTACAGCAGAAAGTTGTGTCACATTACATTATGTT
TAATGTGAGTACTTGTCTTTTTAGCCTATTCATTGAGATAAGCTTTACAA
AGAGTCAACAGGGGTCAGGTCATCAAAGAAAGCAACAACTGTTAAAACGA
AAGCTTAGCTTACATTAATCTTCTTTCTTTTACGGATCTGTTCTTATGCT
GAAGTAAATCATGAAAAAAAAACTATCTGCAATCCAAATGTCAAGACCCG
ATTCTTCAGGACAACAGATACATTGAAAAAACTGCTACGATAGAATTTTC
TCTTAAATCATGCTTATGTGCTCCTATTTTGCATATGTCATTGTGTGCAT
CTTTGTCTAAGCTACCTACATGCCTAAAATCATGAAAATCAGTTGTTCCT
TTCTTCACTTATCCTCTTCCTACATTTCTTACAAAAACACCCTTGCAACT
CCAGAAATAGCCGCTAGGGGGTAAAACGTATGTCACTCCTTTCCGACCAC
AAGAGCTATCTACTACCCAAAAAGTATGACTATGATAGGTCCAGAACGCC
AGATATCAAAACCAAAGGTTCCGCTGCAGTACCTAGGGAACCAACGAGGG
GGCCCAAACTCGAGTCATTTCCAGTGTTTACCACATCACACCAAATATGA
AACCAGTACATTTAGACGATCTCGAGTTATCTTCTTGACCAACACACACA
CACACACACACACACACACAC Coding sequence (CDS) from alignment at Sc0000003:6038646..6046716- >Blg00977.4 ID=Blg00977.4|Name=Blg00977.4|organism=Branchiostoma lanceolatum|type=CDS|length=1185bp|location=Sequence derived from alignment at Sc0000003:6038646..6046716- (Branchiostoma lanceolatum)
ATGTCTAAGGAGAAGTTTGTGCGTACCAAGCCCCACTTGAATGTTGGAAC
CATCGGCCACGCGGATCATGGAAAGACCACGCTTACTGCTGCCATATGCA
CAACACTGGCTAAACGGTATGGTGGCCAGGCAAGAGACTTTGATTCCATT
GATAACTCTCCCGAAGAAAGAGCTCGAGGAATAACCATCAACACTGCACA
TGTAGACTACAACACTCCAACAAGGCATTATGCTCATATTGACTGTCCGG
GACACGAAGACTACGTCAAGAACATGATCACTGGCGCAGCAAAGATGAAC
GGGGCTATTCTGGTTGTATCCGCTGCGGACGGACCCATGCCGCAGACCAG
GGAACACATCCTACTGGCCAGACAGGTGGGCGTTCCGAACATAGTGGTGT
TCATGAATATGTGTGACATGGTGGACGATGAAGAACAACTGAAGCTGGTG
GAGATGGAAGTTAGGGAACTTCTCAGCGATTATGACTTCCCTGGGGACAG
CCTCCCGGTCATACAAGGATCTGCATTAAAAGCCCTTGAGGGTGTGCAAG
AGTGGGAGGAGAAGATCGTTGAGCTGGCGGCGGCTCTTGACCGCTACATC
CCTGAACCTGAGCGGGCGGTAGACAAACCGTTCCTGATGCCAGTCGAGGA
CGTCTTCTCCATCCAAGGTCGCGGCACAGTTGCGACAGGCAGGATTGAAC
GTGGGATCATCAAAGTTGGAGAAGAAGTGGAAATAGTTGGGATCAAGGAA
ACAACTTCAACGGTTTGCACAGGTGTTGAGATGTTTCGCAAACTGCTGGA
CGAAGGCAGGGCTGGTGAAAACGTCGGTGTTCTGCTGAGAGGTACGAAAA
GGGATGAAGTGGAACGAGGTCAGGTGTTGGCCAAGCCTGGAAGCATCACT
CCTCATACCAAATTTGAAGCTGAGGTGTACGTTCTGAGTAAAAAGGAAGG
CGGACGTCATACGCCGTTTTTCAAAGGATACCGACCTCAGTTCTATTTCC
GGACCACGGACGTCACAGGAGACATTTCGCTTCCCGAGGGGGTGGAAATG
GTGATGCCGGGAGATAACGTCCCGATGACTGTAGAGCTGATCGCCCCCAT
CGCCATGGAAAAAGGCCTGCGGTTCGCCGTCCGTGAGGGGGGCCGGACAG
TCGGTGTCGGGACCGTGGCTAAGATATTCGACTAG
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg00977.4-exon-Sc0000003-1570713199:6046619..6046716 | Blg00977.4-exon-Sc0000003-1570713199:6046619..6046716 | Branchiostoma lanceolatum | exon |
| Blg00977.4-exon-Sc0000003-1570713199:6045904..6045921 | Blg00977.4-exon-Sc0000003-1570713199:6045904..6045921 | Branchiostoma lanceolatum | exon |
| Blg00977.4-exon-Sc0000003-1570713199:6044333..6044429 | Blg00977.4-exon-Sc0000003-1570713199:6044333..6044429 | Branchiostoma lanceolatum | exon |
| Blg00977.4-exon-Sc0000003-1570713199:6043888..6044051 | Blg00977.4-exon-Sc0000003-1570713199:6043888..6044051 | Branchiostoma lanceolatum | exon |
| Blg00977.4-exon-Sc0000003-1570713199:6043391..6043495 | Blg00977.4-exon-Sc0000003-1570713199:6043391..6043495 | Branchiostoma lanceolatum | exon |
| Blg00977.4-exon-Sc0000003-1570713199:6042946..6043110 | Blg00977.4-exon-Sc0000003-1570713199:6042946..6043110 | Branchiostoma lanceolatum | exon |
| Blg00977.4-exon-Sc0000003-1570713199:6042520..6042646 | Blg00977.4-exon-Sc0000003-1570713199:6042520..6042646 | Branchiostoma lanceolatum | exon |
| Blg00977.4-exon-Sc0000003-1570713199:6041999..6042103 | Blg00977.4-exon-Sc0000003-1570713199:6041999..6042103 | Branchiostoma lanceolatum | exon |
| Blg00977.4-exon-Sc0000003-1570713199:6041553..6041704 | Blg00977.4-exon-Sc0000003-1570713199:6041553..6041704 | Branchiostoma lanceolatum | exon |
| Blg00977.4-exon-Sc0000003-1570713199:6040970..6041089 | Blg00977.4-exon-Sc0000003-1570713199:6040970..6041089 | Branchiostoma lanceolatum | exon |
| Blg00977.4-exon-Sc0000003-1570713199:6040216..6040364 | Blg00977.4-exon-Sc0000003-1570713199:6040216..6040364 | Branchiostoma lanceolatum | exon |
| Blg00977.4-exon-Sc0000003-1570713199:6038646..6039670 | Blg00977.4-exon-Sc0000003-1570713199:6038646..6039670 | Branchiostoma lanceolatum | exon |
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000003 | genome | Sc0000003:6038646..6046716 - |
Properties
| Property Name | Value |
|---|
| GeneID | Blg00977 |
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