Blg00963.6 (mRNA) - B. lanceolatum

Overview
NameBlg00963.6
Unique NameBlg00963.6
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Full-screen view
Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000003:4265086..4281516-

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg00963.6 ID=Blg00963.6|Name=Blg00963.6|organism=Branchiostoma lanceolatum|type=mRNA|length=16431bp|location=Sequence derived from alignment at Sc0000003:4265086..4281516- (Branchiostoma lanceolatum)
GTTCGAAGTCAGCCATGTTGTTTCAGACGACACTTTGAATCGGCTAGGGT
TCAGATGAATTCCCGCGTGGTTTCTATGCGGTCATGATATACCGTGCAGA
TAAGTTTACAGAACGACTATCTCTTGGATTAGGGAACCGACCAGGCGCAA
TGCCACTCAACGGTAAGGTTTTAAGATTGATTTTTCGTGTGTTCAGCTAC
TCCAAAAGGTAGCATTTAGTATCTTTTAAATATTTGTCTTATGTGTGCCA
ATACCGCCTGTACCCGGAGGGAAATTTAGAACGATATCCATGTTCGAATT
CCATGGCTATAACGTAATGGCGACCGCTTGAAACTTCAGTCCCAAAATCA
AACTTATCTCATTAATGTTATATTGATAGGGATACATAGATATTCTTTAT
AAACCTTGGTTGTTAGAAATACATATGTTAGAAATATGAGGGATTTCTTT
TCTAGATTAGATAGCTAGCGGTGTATTTTATAAATAGATATCTCCTATCC
CGTGTGGGCCGCCATGACACCAAAAATGGCAGGCACGCTGTCTGGAGAGC
CATGGGTGGGGAAATCCGGGCAGATTTGCAGCGAGAAAGCATTCCTGCCT
GGTTTAACTTCACTTGGCATCCAAATAATCCTTTCTAAGTACTACATGTA
ACGTTACATAATCCCCTTACATCAAAGTAAGCGGCGCCCGATTGTTATGT
CGTAAAGAAGTCTCAGAAGCAATAAAAAATTGCGCCTTACTTTATCTCAT
GATCAACTACGCAAACTTTGGTATCTTGTTGACGCAAATCCACCCTTTAG
TACACGTTTACTTACTCTTAAGAAAATAGATTTATGATGATCCAAGAGTA
TTAGAATAGTTTGCGTACATATAGCCTTAAGGATGACGAAGGCATTTTCT
CCTTATCAGACGGCGGTTTGTGTTATCTGTCATTCAGGGTGCCCCAGTTT
ACTCCAATGTTTTTCCCACATTGCTGAAAACACAGTTCACCCCAGGGAAA
GTTTCGTTATTAAACTATTTTGTAAACAGCTAGCTTTGGTAAAAAGACTG
TTTAGCATATGCGCCCCCTCCCCCACAGAACATCAGTCAGACTAATGTGC
CAAATATGGTACCCACTGCTTGTGGCTCATGCTGCTCATAAGGCTAGAAA
AATGAATGGAAACATTGTAACAGTTGACGTATATAGTTTCAGAAGTAATG
CTTGTTTGTTTCATACATGTAGTTTCTTCTTCTGTCGGTCTCGAAGCATA
ATGCTTTTTCGGTAGTAGATAAAATAGTGAAATTATGCATATGCGACTTC
GATATGTCTACACAACGGTAGAATAGAGTCCTCGTTTAGTTAGAAGTATG
TTAATTAAGATAGCCTTTATCAAAAGTGTGATTCGGACTATGATAAGGGC
GCATAGTATTACACATTTGTTGGGGTGTTTTTCGGTTTTTAGAAAGACTT
GTTGAAAATATAGTCTGTTTTCATCAATCAAAGGTAATAACAGCTGATCA
CACAGTGTTGTGGGAATTGAGAATGCGGAGCGTCTAGATAACGGCGCACG
TATTGCTGTCACTTTACGTCATTTGAAACATAGCCTAAGGGTGCCTAAAG
CATGATCTGATGTAAAACATCGTATTATCATTACTAAACACGATAAGCAT
CGCGTAAACATCGCAGTATCATCATATTGAACACGATAAGTCAGTAAACA
TGACGTTCACGATGTCCCAGATGCGCTACCAGTTTTGCGCTTGTTTATGA
GTCATGTTCTATTTTCTAATTTCAAAACAGTGCAAAAATATATATAAAGG
ATGAATCTTGTATACCGCACCCTTTATCATACATATATAAATACGTGAGC
TACTGTTTGATTCAGAGAGCAAGTTGGTACCGGTACCGAACCGTTGCTTG
TGAGAATCATGCCGAATACTGGAGTATTGCGAACCACAGCCGCACCATAA
ACTAGAGGGGACGAAAAGGTACAAACTTTTATTACTTCATAATAGATGAT
AAATTTATTGCTCCACAATTGTATATATGATACAATGTATATAATCGCAA
CTGGTATAAGGATTATGGAAACTAATATACTCTACAAGTACTAGATTTAC
ATTTGGTCATAGCCGTTTTCAGCCTAGAATGCGTTTTGAGATAGATTTCA
ATTTCGACAAGAAACGGGCCTTCTTAAACTGTTGAAAATATGACACGTTC
ATTTCTGCACCCTTTGCATCAAAGTCGACTTTGTTATTTTCAATTCTGTA
AAACGGATTTTCCAGCATGCTATTCGTACGAACGGTTTATAGTTGTTCAA
TAATTGACATAAGAAGACAGCTGTGCCTTCAGCTTTTAGCTTGGTAAAGA
TTCAGGCCAAATCACTGAACACAAAAAATCGTCAATGCACAATGTTGTCC
CAATACAAGAAATGTTCACTCATTTTCATATGATAATACTATCATTATAA
ACCATTCATCTGAAAGCTAACGTGAGTTTGTAAGGGGGTGGGGGGCAGAT
TAAAATGGCGGATATAAAAGCTGCTGACTCACAGACACGCCGTTGAATTT
TCCATGACAAAACTCCCATATTCTATTTTGATTCATACAGAATGACACAC
ATTGGCCTATTTGCTGAAATTGTGAAATTGAATCCATTCTTTAGCTTTGA
CTGGCTGGCTACATTGTTTTGTTTTTTGCCTTTTACATCATGATATCTTT
AGCTCTCACCCCCCACACTGAACTCCCTTCGTATACGGAAACACTACGTA
CGTGATCAGGCAAAGAATTAACTCCAACATCAACCTTTCTACCACGTCTT
CTATGTCGGAACGATATCAGATCCAGTAATTTTTGTCTCCGAATTAATTT
GTCAAAAATCATCAGCTATAAAATTCCGCAAACCGACGTCATGGTGCTTA
CAGCTGTCGTTGTTTATGTACATCGTTCTATCTATTCTTAATTTTAAATT
CTGTTCTTATTAAGTTCAGAATAAGTGTAGATGGGAAAGATTAGAAACTG
TTAAGTTCAATTTATCACATAGATTATGTCATAGCGGTAGGAAAGAAAAA
AAGACTCGTCAATTTGATTGTTTTGTTTCTTTATGTATAGAGCACGTCTT
GACGATTTCCTCCTCGTCCAATTTTCTGATTTGTTTCTACGTTTTACATG
TAGCCTTGCGAATCGGTAACAGGGTACTTGGCATTTTTTAAAGCTTTTCT
CACTTAAAAAAGGGGAGATGAATACTCAGATGATACTGAATTATTTATTA
ATGTTAGAATCAAAGTGATGTCTTTACAAGCATGTAATGGTATTTTGTTT
GATTATAACGTTGCCTTTAGCATGTAAAAATCATCAGACATGATGGAGCC
AAGTATGATCTATTTAGCGACAGAATTTTACTTTGCATACAGAAATCAAG
CTATATTTCCCGAAATTAGTTCTGACATTGACCTTAGATAGTACCGCATG
GTAGCCTAGTATTAAGGACAAACAATGCCGTAAATAACATTTGTCATAAA
CTTTATTTTATGTACTTTGGATAATCAAAATGTGTGCTTAAGCAATAAAC
ATTTGATATTTCGTAGCATACGTTCTAGAAATGCAATGAGATCAGAAGAC
TCATAGAATTAACGTACAACTACATATTCCATTGTGGTCTCGAAAGTTGT
CGAGTCAGCGTTTGTTTTCAAAGCCAATCAATAGAAACTTGATACCCCAC
TTTTAAACTAAAACAATATGTGAATACTCTCGTTGTTGCCGAACAAATTT
GTATCGCGAGAGTTTATATGCGCGAGATTTCGGACGAGATCTGAAAATCG
GCCTTTTACAGAAATTTGTCTTTGAACTATTATGTGAGAAAACTGATCAT
GAATGGTAACGTTAAACTTGAACATGAACCTCACTGTCCGTGACTTAAGA
TCTGACTCGGGGACATGCCGGGTGAAGACCTTGCCATTAGAGACATTAAA
ACCATAAATAGAAGCCGATGCCACAGGCGGGAATGCATGATTGATAGACA
ACAGTTGCCATCTGTTCTGGCTGAGACGCTTTTGCATAATGCCCAGACGC
AGGGTTAACGCTGAATGGTGTAAGCGGATCTGGAATTCCTCGAGAGCAGA
AATTGAAGTTATTAGGTTTAACGGCGTTTTTCTTTGGAATTTTTCGAGAA
ATAGCACAGGTAAATTGACTTTTGTTTTTTCATAACTTAGATTGCATATT
GTGCTTTGTTAAATGGGTGTGCATCTATTCATCATAACGAATGGATAGTA
TTTAAGGCGGGTTCATGGTTGTTCATTGTTCAAGGTTAATGCGTGCGGCG
TAGCCTTAAGGTCCATAGAATTACACTAAATTTAGGAAGGAACCGCTACG
TTTTTTCTCACCTCGCAACGAAGTACGCAAAACTTTCCCTGGGAATAACG
GGAAGTCAAACTAGCTTGCACATTGCTTGGCAATGGGTCTTATATATATG
CTGGCTCCAAGCAGAAGCTAGCCCCTGTAAATGAACTTGTGTACAAAATA
CTTACCGAGGTGTTTCCCGTTCCCAGGACGGTGATAGTGCCGACATGCCC
CCAGTTAGCAGCCGGTCATCAGTAGACGCCATGAAGCCAGCCACGGCAGC
AGGAGGGCTACCCCAAGTACAGGTAACAACACATCTTTACTTCAATATCT
AGTATAATTGAGTATAAAGTAAACGTAAAAGGTACGAAATATGGAAAATA
TCCATATCAAAATGCAAAATGCAATGATTGTACTCAAACGAAAAATCCAA
AGTACAGGTAACGACGAATTTATCTCAAAGGACTTAAATAGCAATTTTAA
GTACATATTGTAACAACCCCTGTATGGTATACATAGAAAAATATATCAAA
GCAGATCTAGACGTTTGAAATTCTTCCAATGATTGAAAAAACGCTTGATC
CCATCTATACACTCTTGTATTAGGTAGAGCAGCCTTTAATACAGAACTGT
AGATAAGTACCAGTAGATGCCATACTTTGTACCTTGTACAACTGTTGTGC
AATAAAGTGATATATTATCTTTTCTTCCATATGTAGTATACTTGAGTATA
AAATCAACATAAAGATACAAAATATGTGCTATATAGTACTGCAAAATGCA
ATGATTGTCGTCAAAAGAAAAATCCAAAGAAGAACATAGTAAGAATGTAT
AAGTTGATGTCGTCTCAGCGCTGTCAAATGTTATCTCGTTCTCCTCTTTA
TAATGATGATGAACTATGTTTATGAATATCATTCGTGATTCATTCTAAAG
AGGTCCTCTAGATGTCACTCTAGATGAGACTCATGTCACAAGCATGATAT
CATTCACCACCAATGGCTACCATGTGTCATACTCCATTTACTCACACGTT
CATTCATTAATTCATTCATTCATTTATACATCCATCTATCCACCCATCCA
CACATTAACAGGTTGGGGTTGACGTTGCACAGAAAAAGGAGGAACCAGAC
GACGGAGGATTTGTCGGGTTGCTGAGAGCGCAGGCGCAAGAGTCGGGAGC
CTCTTCAGGGGCATCTGAGTCGGCGCAAACACAGGTGAGTCAGGGTTATG
GAGTTTTAGCTTTCTTTGCGGCGACGGTACCAAACTTTCCTACGGCCTTA
TCAATATTCAAACAGAACATTATCTTAAACCAACCCAGTGCACATGCGTA
CCAGGAGTAGTCATGACTACAAATATCAGCGTATCCTTCCTAGCACTGAC
TGTTTCGGATTTTCTTTTTTTCCCACGTATACGTACTGTAAGAGCATACT
GTCATCTTCATCATGGCATCACTGACTGGTTACACTGTGCACTGAATCGA
TGTGTTACTGGTTCATAATGTAGGTGTTACTGCTAACAATGCAGTCCCAA
ACGTATAGTATTGTTAAATTGATAGATATACTGCAACAATGGTGAGATAA
TGCGGTTCAAAATAGTACTGTTCTATACATACATATTACATACATTCACA
GATGTACAATGTACGTTGTATTTTACAGGGAGAGAAGCCCGCCGCTGTGG
TGGAACCAAACATTCATTCAAGCTTACCTAGGAGATTACCTGAGAGAATT
CTGGTAAGTAGCTTTTTATGTACATGTATATGGCACTAACGGTGACATCT
GTAATAGTGTTTATTATCATTAATGGCACCAAAATACCAGTGTCCAAAAA
AAAAAATGAAATTAGAAATTGCTTACGTTTTGAATATCAATTATGTCCTC
TTCTGAAATACATAAACTCATCACACGTGCACCGAAGGTTGCATTATTAC
AATATAGATTTGTTGTCATAGGTTTCCAATGAAAAAGAAGTATTACTGGG
TATCAAGCAAGAGGCAAGTGCACAGAGGTGAACATGACTCCGCCCCTGAT
GTGTCGCTAAAAAAGCAAACGATGCATGCATGGTAGTGTGCTCAAGCATA
AATCTATTATGTTTATTTCAGTATGGAGACTTGTGTAACGCCGCCCTGAT
AGGGAATCACGACGTGGTAGAGAAACTGTTGAAGGAAGGGGAAGACGTGA
ACGAGAGGGACAAGGTGAGAACAATATCCTGGGAACGAGACTCCGTCGCC
ACAGAACAGTAGTAACAGCTTGTCTTCGATCTACGTCTTAAGTTATGGCA
GAATTTATCCTTATTTCTATTGTGCCAATATAAATGGTAAAATGACCCAC
CTGAATATAGAAGGCCTTTGAGTAGCCGTTTCAAGCAGCTGATTGACCAG
CCGATTCCAGCAGTTGATTAGGCTGATCGCTGAATTTGAAGGAAAGCTAG
CAACACATCGGTTGTACATTACTTTTGTGTTTTTCAGGATGGTGAAATAG
CCTTGCACATTGCCGCACAAGAAGGACATTCCTCCATTGTGGACCTTCTG
TTGGAGGCCGGCGCACAGGTGGAGGCTAAAAACAAGGTACGAGGCTAAAG
AGTTTGCAAATAGATACAATTAGCAGCAATAAAATCAAATATATGTCACA
GTAGAGATTAGAATTCAGGAGAACTTGGGCATGAAAAAGTTATTTANACG
TTCACCGAAGTTAAAATTCTTACAATATAGATTTGTTGTCATAGGTTTCA
AATGAAAAGACGTATATGCAAGAGGCAAGTGCACTGAGGTGAACATGCCT
CCGCTCCTAAGGTGTCGCCAAAAAAGCAAACGATGCATGAAAGATGTACG
TGTATGGTAGTGTTCGTGATCATAGATTTACGATGTTTATTTCAGTATGG
AGACTTGTGTAACGCGGCACTGATAGGGAACCACGACGTCGTGGAGAAGC
TGTTGAAGGAGGGGGAAGACGTGAACGAGAGGGACAAGGTGAAAACATTA
CCCTGACAACGAGACTCCATCCCAACAGTAGTTACAGCGCGTGTGTTCGA
TCTATGTCAAAAATTAGATACAAGAATCCATCCAAGTGTTTATTCTGCAA
ATATAGATGGCAAAATGGCCTACCTGAAAATAGAAGGCGTTTGAGTAGCA
GATCCTAACAGCTGATTCGAGCAGTCGTTTAAAGCAGCCGATTGACCATG
GTAGCCGATTCTAGCAGTGGATTTCAAAATTCTAAATTCAAAGGAAAGTT
AGCATCAGATTATGCTGATGAAGGTTAGACATCCAGGTAATAAGATACGC
CAAAAATAATTACTCTAGCCACTGGATAAAATTTTCCAAAAAAATTCAAA
ATTTTATCCAGTTGCTTGAGTAACTATTTGCTAGCATCAGATTGGTTGTA
CGATGATTTTCACATTATTTATGTGTTTTTAGGATGGTGAAATAGCCTTG
CACATTGCCGCACAAGAAGGACATTCCTCCATTGTGGACCTCCTCTTGGA
GGCCGGGGCACAGGTGGAGGCTAAGAACAAGGTACGAGGCTAAAGAGTTT
GCAAATAGATACAATTAGCAGCAATAAAATCAAATATATGTCACAGTAGA
GATTGGAATTCAGGAAAATTTGGGCATGAACTTGCAATAGAAAATGTTAG
TTAGTTATTTATCATTGGTATTGAGCCGCAGAACACAGTGGATCATCATC
ATTGGTGTTGGCTGTGAACAAATAACTCCCATGATTTACCATGAAACTAA
TAATAGATTAGTCAAAAGTTACTATTTGACTATTTTTTAGCACTAAAAGA
GATTCAAAATGTCTTTTGTTTTCAGGATGGGGATACCCCGCTCCACAACG
CCTCACGGGAAGGCTACGTGGACATAGTGGAGAAGCTTGTCAGTGCCGGG
GCTGATGTTGAGAGTAAGAATCAGGTATGCATATGATCACCTTGATGACG
ATATAATTTCCACTGCGAAATATCTTTGGTATGACTCAACATCAAAACTA
AGTCTTTCAAAATGAACGTTTTACACAAACAATATAATGGGATACAGTGT
ACTTTAAGCAAGAAAAACAAAACCGAGTACAAGTCATCGCTAGAAATATA
TAGATGGTATTCGGAGAGGTATCCATCATATCCACTTTCCATTTCAAGTT
ATTTGTCTGTTATGAATGTTGTACAAGTTTGAAGGAAAGCTGTTGAAACA
TCAGCAGTAGTTCCGTCAACTGTTCTTTCAGGTCACTTGGCTGCAGGGTT
CGTACGATTACTGGGAGTCAATTTTTGAAATGTGGTACCGTTTGGCCGTC
AAGTATCAGGAATTGAATTTGTATATTGATGCTGTTAAATTATGCAATAT
TTTTTCATTTAGCTTTTCATATAACCATGGAAATATTTGCGAACTTTTTC
ATATTAAAGGTGCTTTTTATGGGACTTTGAAGGCGCACTTTTCGCAAATT
CCAAGACGTAAAATTCAAGACACTTCCAAGAAGTGCACGAACCCTGTTCC
GTTTCTTATTCCATTTTTTGCACCCACGCATTCCACAGAAAGGAGACACA
TCCCTTCATCTAGCCGCCGAGAGAGGGCACTTCGGCGTGGTTCAGAAACT
GGTGGACAGAGGGACAGACTTCACCATCAAAAACTTCGTGAGCACCCTTG
TCCTCTCATCCTTCCGTCACGAGTGTTCTCACCATTAACCTTGCATCTAT
CCACTTATATAATTAGTTAAGTCATCAAGTCTATAAGAGGCGCGCTTGCT
TGGGATCAGGGCTGTTCCAGACCAAAGCAAACAAAAGACAAAAAAGTTTC
AAACATATCAATGCATAACGGAAGAATATTTCAAAAGTACCATCTCTAGC
CCTTTGGTGGAATAGCCCTTGGCTATCATGCAAATGCTAATAATAAATAA
TCTCTTTTTCCAAATATCAGATATGCCTTATAACATTAATGAATGAAGTT
TGTACCAGCTATTATTTTTGCTTATATACTTATCATAACTTGATTCATTA
AAGTAACTTCTTTGGCTTTGCTGGAGGCAATGAATATATAACCGCTCTGC
TTCCATAATTAATTTTGAGAACTACATTAAACATCCCGAATACATTGGAC
TCTCGCAAGGCTACACACGAGACTTCATGCAACTATTGATGTTCTCTGGT
TAGTAAGCGCTGGAATCGTTAACGTTTGGTCTGTATATGCGTTTATGTAT
TTACTTGACTATATAATTATGTACAATAGCATACAACAAATTTGCTCGCT
TCCGCATCAGACAACAAAAATGCAGACGAAAATGACATTTAGAAAACATT
GCATTGTCATTATAAAACTCCAACCGTCTACAAGTTAAAAATTTATTCAA
ATTCTAGAAAAAGTAGGACTTTTCGTCTTCCATTGTCTCCAAAAAAGAAG
TCAAACCCAGCTTGTCTGGATATAGCCAACAGTCGTATTTAGTATTAGTA
GTCTATTGTTACGACAAAGTCAGTCACAGTTCACTGACACATGTATGTTT
TCCCTATGTTTATGCCATGTATATGCAATTAGCCCACGGGCGTGAAGTTG
CAATAAAACTTTCAATTATGATCATTACGCATTCCAGAACGGCATCACAG
TGCTTCACGCAGCCTCAGATGGCGGACACACCAATGTTGTGGACACCCTG
ATCAACGCTGGGATAGATGTCAACTACAAAGATGTGGTAAGATAGAATTG
ATATCGTCCCTGGAATCCAGCCAGCATACGGCCCAGTTGTAGCTGATACA
GTTTGGCTGGATTCCAGACTAAATATGCATATACCTACACTGCCAGTTGA
AGTCTTCAACTACCATTCACAACTACCATTCAAGGTTTACAATAGAGTTA
TGATACTTATGGCTAAGGGTGTGGAATAGAAAATATAACATTTCATGAAT
ATATATGGCAGAAAACTACCTTATGTTACATCATTGTGAATGTAAATGAT
TTGTTAATGTTTCTGTTGTATCCTGATTTGTTCTGATTTTGCTAAGGTCT
CAGTTATTATAACTGCAGGGACTGCCATAAAGGCTAGCCTAGCAAAAAGA
CGAGAAATAAATACAAACGTCCTCTAAGGTTGATAGGCTTAATGTTTCCA
TGTTCTTCTAGAATGGCGAGTCGTCGTTACACAAGGCTGCCATGAACGGT
CACGTGGGCTGTGTGGACCGACTGATGAGAGCAGGGGCAGACATGGTCGC
CAGAAATGACGTAAGCTCTCAGATACGGACAGCTTTAAAATTACAACATA
AAGCTAGACTATAACCATCTCACTACTCATGAACGAGTTCTTGGATAAGG
AATACCTACAAAGAAAATTAACATTGGGATTGCAAGTAAAGAAAAGAAAA
TCAGTGAAGTATTAGGTAATGCCCATTGAAACAATCATTTAAGCGTATCT
AGATCAAGATGTGCGTTTCAACTTTTATGTAGTACTACGTTAACGTTACG
TTAAATGAATTCAGTTGCAGCCAGGCACTGCGATTGAAAGTTAGTACTTC
TTTTCCAGATACATTGAAAAACGCAAATACAGTGATAATGACATTGTCAT
TTGATTTTATCGTTATTTTGCATGTAAGAGTACACATTACCAAAAGACAG
TTACTCAAGCAACTGGATAAAATTTTGAAACAGTACTAGTCATTTGACTG
TCAGAATTTCATCCAGTTGTTTGTCTTAACAGCCTTTTGGCGTATCTTAT
TACCTGGATTTCTAACCTTCATTGGCGTTTTCATTGCCAAACTTTGCGAC
GTAGAGATCTTGTAAACTAGTTGTTTTGTGTTATTCTTATCCTCCCAGAA
TGGCCACACTGTCATTCACTGCGCAGCGATAGGAGGTCACGTGGGCATCG
TGGACATGCTCATCAAGAATAACTTCGACATAGAAATCGTGGACGAGGTA
AGAAACTTTATGTTTTCAAGATAAAACTATTCTGAGGACAAGATTTGATG
ATGGTTAAGTACAGCCAATCCAGCAGGCAGCAAGTTTTAGAACGTAAAGA
ACAGAAATGATAATGGGAATATAATGAAATAGAAGCTTCCACTGAAGTGA
GAGACCATGAAGAGTGGTAGGAGAGTGTGTGGTCTAGTTGCGTCACTTCT
GTATTACAGTGACGACCAATCACAGTACTGTATGGAAGAGAGGCTCATGA
ATAGGTCCAAGCATGCATTGCACCCCCTAGCGGAGGTTTTCTGATAAGCA
GCAGTCGACTACCTCCAACTTCAGCTTACCTTACAAGGCACAAGCACGTG
ACTCTAATGTCTATTGAAGATAATGTAAAAAAAAGTTTTTAGGGTGTTAT
AATCCAGTTTATGACAACTCACCACAAACGGTAGCCCGATATATGTCTTA
AGTGTCCGAAAAGTTCAAGTTAAACATCTTCTATACAGCCGAGTTGTACG
GCGACAGTCCGACTTTCAAACAAATGCCGCCATTTTGATTCTTATGACGT
TAAATGGCCTTTGCCCTACAGGACGGTGACCTTGCGCTCCACAAGGCCGC
GACAGAAGGACATGTGGAGGTGGTGGACAGGCTGGTGAAGGCAGGGTCAG
ATGTCAACGCCAAGAACAATGTATGTGAATTATGTAAACCTTTAACCTTT
AGCATGCCAAGGTAGCCGGTTGGTCCAAACTATGTATTCATTATAGGGCC
AGGCAACAGGGGAAAGGTTAAGCCTCGGTGTATGAAATTGCCAAGTTTGA
CGCCATCCAATTGAACTGTATAGCTCACTACATGCAGTTTCTTTCATTTC
TGCGTATTAGCAGTATTATTATTATCGGGTTAATGTCGTTTGGTGTGATA
GATTAATGATAATGTTCGATGAACAAGCTAACAAATATTTGTCCTTGTAG
GTCTACCTAGATAACAAATAGCTTTAAGAGAACAATGGAAATATACATCG
TCTATGCAGAAAATTATACCCTTGAATGTAACACAAAAGTGTGTTAAAAT
TAAAATGCCATCTATCGTCCAGCAATGGTGATTACAAGTCTGGAATTTCA
ATGGATGTCGTAGGCAAAATCAGACAGAATGGTCATTTTCCGAATAGATG
TATAGAAACTGTACGATTTGTGGGTGTTAACAACCTTCTTGACCCCCTGC
AGTACGAATACACACCGCTGTACAACGCGGCGTTGTCCGGTAACTTCCAC
GTGGTGGAATATCTCATCGCTCACGGGTCAAACGTCAATGAGAAGGACGG
AGTAAGTTCATCGGTTCTCTGTTTCAGAAAAAAACTGTTTCAGAATGTAG
TAGTGTTGTTAACAACATTGTCAGTTCTACTTAACACTCACTAAATTGCC
CAGATGCCCTAATGTATGTATTGAGAGGCAAAGAGACCACTAGCGGGCAC
TGAATCAACACTCAACACTGAAGGCAGCATCTCTTCTCCCTGATTTACAA
ACATCGTGGTTGCCACGAGCTCATATAATTAAGAGTGAGATTAAATGACC
CAATGGCATAACCAGGGGTTACGAGAGCTGCTCAGAACATTCGCTACCCC
ATTTAGACGGAACGGTTTTGATCCACTCACACTTTGAAGGACACGCTTTT
CGATAAGTGTGATGGGTTCTTAAATGTGCTTGAGGTGTGCCTCTCTCAAA
CATATATTCTCTGTAGACATCAAAGGTAGCCATGTGTCGTAAAAACTTTT
GATTGTTGACTACATACGTTTTGTAATAAAGACTAATAGTATGATGGTTT
TACTTCAGAATGGAAACACTGCCCTGCACGAGGCCGTGTCCAGACAACAC
GCTGCCGTGGCCAAGAAGCTGATTGCAGTTGGAGCAGACATCACTGAGAA
AGACGTGGTAAGGTTATGATAACTTTGAATTTACAAGTGTTTGTACTGGC
CACATAAACAAACAAATAAAACATACACACACGAACACACAAAAATACAG
ACATACACACACGCACAGACACACAACACAAACACACGGACAAACAAACA
TGCAGACACATACGCAAACACCGACCGACGTTCCACAGCTGATAATTAAT
TTTCTCCTAAATACAGTTGTGCGAAGTAAAACATATCTGAGAAAGCTATA
ACACAGTAATAATATAACTTTACATGAACATAATAACCATTCCATCAGTA
CTGTTCTAATAGTGGTTATCTATCCTGTAGAGTATCTATTTCATCTCATA
TTTTGTATCTTATATATAGTACGGAAGCAGCATGTTGTTCAATGCTGCCA
TCTGGGGAAACGTTGACGTCGTGGACAGCCTGATCAAGACGGGCGCTGAC
GTCAACACTAAGAATAAGGTCAGTTAAGCCAAACCTGCTCAAAACGACCA
CTTAGGGGGCCTGAGAAAACGTGGGTGGTCAATATAGACAGGATTCGTAA
TGTTTGTGCCAATAGGAAAATTATCTAAAGGAGGAAAAAAGTTGGCCACA
CTGGCCAGGTGGTCCCTATGTAGAGGGGGTGGGGTCACTATCAACATTTG
AAAAAATGTTTTTACTACATAATGATTTTTCTTCATAATATTTTTATAGC
ATGGACGTTCATCTGTGCTGGTATCTAGCTAGTTAACATAGAATAGAGTT
GGTAGTTAACATAGAACGACTTTCAGCTCTCTACTACATTTATCATTTAT
TTTCGTTTGCTTTTGAACACTTTGCACCTCTTACACTTGACATGTATCTT
GTCAAATAGGGAGACAGCACTGCACTTCATGAGGCAGCCGCCAGGGGTTA
CGTGCCCGTTGTGGACCGTCTTCTTGGGGCAGGGGCTGATGTTAACGCTA
AAGACAAGGTAGAGTATTTCAATTTAAAAACACTTCTATGAGCTTCTCTT
ATGATTTACATAATCTAGCACCAGCAATGATCATTCTAGCCCCTTCATGT
GAAGAGGAATGGATACCATAGAACTTGATACTTAAGATAAGGTAATGATT
TTATTCCAATCAATATATAGTTATAGTTACTTGGCAGTTCGAAGTTTGTT
TCCACCTTTTATGTATTTTCCACCGTAATTCGTAACTTCCTAGTTTGCCT
TTGGATCCGTGGTTTACATTTATCTCTGTTCTCTTTGTATACCAATTTTG
TGAACAGCAATGAATAAATAAGAATTTAGTGAGTAACGGAATATTCGTGT
TTTATATAGTACAACCACAGCGTCCTACACAAGGCCGCATTTGGAGGCCA
TGCAGACCTCGTCAGCACACTGATCAGGTCGGGAGCCAACCCAAACGCAC
AAAACAACGTGAGTCGGTTATTGTACACACCTTCGTAACGCTATCTTCTT
TCTCGTAAGTCGACTACTCCTGATTAGTAATAAGTATTATATATACATGT
AGCACATGTACTTTGTATAATCGATCGAAACAGAGATAGGCACTGCCTCT
ATACACTGAAAGGTATGGGGAGGACCTTAACTTGTTACTAACTTAACCCT
TTGTTTTGTGGTTTCTTAACGTTTTGCTGCGGTCCTACCTACAGGACGGA
GACACGCCTCTTCACATTGGGTCCTGCATGGGTCACGTGGGCGTGGTGAA
GAGTCTCATCCAAGGTGGGGCTGATCCAAACGTCGTGAACGAGGTGAGGC
GACATGTGAGAAATAAGTAAAACGTAGTGGAAAAAAAGAGAAGTTCGTAC
ACTACCCAGCAGAACATCGGTTTGGAAATGTGACAGAAGGAAACCCCCTT
CAGAGCCCAGCCTCAAACCCCTTACGGACCTCTTTGCAAATGTCACCGAA
GAGTATAGTTGCAATAATGGATATTTTCATTCTACCATATGAACTTTCGA
TATCGATGGTAAGTCAACCGGGTAACGATATCTTTGAGACAATATAGATA
ATCCAACTCCACAGAACCTTAAAAATCATACTTCAAGTTGGTAATTCTAG
AAATTAAAAAAAAGAACCACTATGAGAATGTTTTTTGCATGACTAATTTT
TCATCTATTCTATTAAAATGGTGGCTCTCTTAGTCTAGTATCTATTAACA
ATAATAGATTCAGACCTCATGCATGACTTGAATATATTCAGGTTGCTGTA
TTTCTATGTATTTTGGCGACACCTCCAGAAGGCGACTTTGAGTTTGCAAT
AAATAAGCCCGGCTGTATATATCACCAAGTTACCATGCAGGTTTGACCAG
ATCATATTTGCTTTTCATTACAGTACGGAGGAATTCCAGCAGATGACGCA
GAGGATGAAGAAATCCGCGCCCTTCTGATGTCCATGATGTCAGAACCAGA
GACAGAGTAGGGTCAGAGGTCAACAACCAGGCCGCCATTTTGAAATATAG
AAAATTTACCAAAATCCGTGACTTTTGTTCCTAGACACACTGATACAATT
ATCACTTTTTAGATGACTTGACAACTTTTGAAAGCTGAAATATCTTGCGA
TGCTATAAGGAAACTAAAGTACGATTTCATCATTAGATTTAAGTAAAATC
TAAGAATAGAAATACGTGAAGGCTAAGAGTTGTATGTTTTCACATTACCT
CATTATATTAACCAACAACCAATGAGGGGAGAAATAGTCATTGTCATTGT
TGGTAATAACATTTTTGTATTTCATTACATGTTACACAATTTATCGGTAA
TGAGGTAATTGGTTTCTTGTCGAGTTGGTCCACAAAGTTTAGATTTAAGT
CTCCATCTGTACTCATCGTGTATAGATATCTTCTAGCTTTTGAAGGCCCT
CTCTACAGACATGTGACTTAAGCCAAAACGATTAACATTTATTCATAACG
GACTTGATAAACAGTTTATAATTTATGCAACTTACACTGCAATAAAGTTA
TTATTATCATCAGCTATTGATTTAAATTTTTAGAAGACCGTTGGTGCTAG
TATCATCAATATCATTTATCATTGTTATCATTTATTCATTTACGCCATTG
TAAGACTGTTGGTGCTAGCATTAACATTCATACAGCATGTTTTGAAACAT
TGTAGCTCTGAAAACGTAATTGTACGTTCATTTTGGGTGCTATCATGAAC
AGCCTTTTCTAGGGGGCGCAACGGTACTTAATTGCATACTAGATTACACC
ACGGACGACTCTTCTAACTGTGGTATTACTGTATAGACCAGTGGCAGTTT
ATTGCTGAGATCAACCAAATGGAATTGCTGATACCCAAACAGTTTTCTGT
ACTTTATGAAATAAAATAAATAATCACACAC

Coding sequence (CDS) from alignment at Sc0000003:4265086..4281516-

>Blg00963.6 ID=Blg00963.6|Name=Blg00963.6|organism=Branchiostoma lanceolatum|type=CDS|length=1743bp|location=Sequence derived from alignment at Sc0000003:4265086..4281516- (Branchiostoma lanceolatum)
ATGCCCCCAGTTAGCAGCCGGTCATCAGTAGACGCCATGAAGCCAGCCAC
GGCAGCAGGAGGGCTACCCCAAGTACAGGTTGGGGTTGACGTTGCACAGA
AAAAGGAGGAACCAGACGACGGAGGATTTGTCGGGTTGCTGAGAGCGCAG
GCGCAAGAGTCGGGAGCCTCTTCAGGGGCATCTGAGTCGGCGCAAACACA
GGGAGAGAAGCCCGCCGCTGTGGTGGAACCAAACATTCATTCAAGCTTAC
CTAGGAGATTACCTGAGAGAATTCTGTATGGAGACTTGTGTAACGCCGCC
CTGATAGGGAATCACGACGTGGTAGAGAAACTGTTGAAGGAAGGGGAAGA
CGTGAACGAGAGGGACAAGGATGGTGAAATAGCCTTGCACATTGCCGCAC
AAGAAGGACATTCCTCCATTGTGGACCTTCTGTTGGAGGCCGGCGCACAG
GTGGAGGCTAAAAACAAGGATGGGGATACCCCGCTCCACAACGCCTCACG
GGAAGGCTACGTGGACATAGTGGAGAAGCTTGTCAGTGCCGGGGCTGATG
TTGAGAGTAAGAATCAGAAAGGAGACACATCCCTTCATCTAGCCGCCGAG
AGAGGGCACTTCGGCGTGGTTCAGAAACTGGTGGACAGAGGGACAGACTT
CACCATCAAAAACTTCAACGGCATCACAGTGCTTCACGCAGCCTCAGATG
GCGGACACACCAATGTTGTGGACACCCTGATCAACGCTGGGATAGATGTC
AACTACAAAGATGTGAATGGCGAGTCGTCGTTACACAAGGCTGCCATGAA
CGGTCACGTGGGCTGTGTGGACCGACTGATGAGAGCAGGGGCAGACATGG
TCGCCAGAAATGACAATGGCCACACTGTCATTCACTGCGCAGCGATAGGA
GGTCACGTGGGCATCGTGGACATGCTCATCAAGAATAACTTCGACATAGA
AATCGTGGACGAGGACGGTGACCTTGCGCTCCACAAGGCCGCGACAGAAG
GACATGTGGAGGTGGTGGACAGGCTGGTGAAGGCAGGGTCAGATGTCAAC
GCCAAGAACAATTACGAATACACACCGCTGTACAACGCGGCGTTGTCCGG
TAACTTCCACGTGGTGGAATATCTCATCGCTCACGGGTCAAACGTCAATG
AGAAGGACGGAAATGGAAACACTGCCCTGCACGAGGCCGTGTCCAGACAA
CACGCTGCCGTGGCCAAGAAGCTGATTGCAGTTGGAGCAGACATCACTGA
GAAAGACGTGTACGGAAGCAGCATGTTGTTCAATGCTGCCATCTGGGGAA
ACGTTGACGTCGTGGACAGCCTGATCAAGACGGGCGCTGACGTCAACACT
AAGAATAAGGGAGACAGCACTGCACTTCATGAGGCAGCCGCCAGGGGTTA
CGTGCCCGTTGTGGACCGTCTTCTTGGGGCAGGGGCTGATGTTAACGCTA
AAGACAAGTACAACCACAGCGTCCTACACAAGGCCGCATTTGGAGGCCAT
GCAGACCTCGTCAGCACACTGATCAGGTCGGGAGCCAACCCAAACGCACA
AAACAACGACGGAGACACGCCTCTTCACATTGGGTCCTGCATGGGTCACG
TGGGCGTGGTGAAGAGTCTCATCCAAGGTGGGGCTGATCCAAACGTCGTG
AACGAGTACGGAGGAATTCCAGCAGATGACGCAGAGGATGAAGAAATCCG
CGCCCTTCTGATGTCCATGATGTCAGAACCAGAGACAGAGTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg00963.6Blg00963.6-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg00963.6-exon-Sc0000003-1570713199:4281355..4281516Blg00963.6-exon-Sc0000003-1570713199:4281355..4281516Branchiostoma lanceolatumexon
Blg00963.6-exon-Sc0000003-1570713199:4276895..4276990Blg00963.6-exon-Sc0000003-1570713199:4276895..4276990Branchiostoma lanceolatumexon
Blg00963.6-exon-Sc0000003-1570713199:4275983..4276105Blg00963.6-exon-Sc0000003-1570713199:4275983..4276105Branchiostoma lanceolatumexon
Blg00963.6-exon-Sc0000003-1570713199:4275464..4275538Blg00963.6-exon-Sc0000003-1570713199:4275464..4275538Branchiostoma lanceolatumexon
Blg00963.6-exon-Sc0000003-1570713199:4275003..4275095Blg00963.6-exon-Sc0000003-1570713199:4275003..4275095Branchiostoma lanceolatumexon
Blg00963.6-exon-Sc0000003-1570713199:4274631..4274729Blg00963.6-exon-Sc0000003-1570713199:4274631..4274729Branchiostoma lanceolatumexon
Blg00963.6-exon-Sc0000003-1570713199:4273293..4273391Blg00963.6-exon-Sc0000003-1570713199:4273293..4273391Branchiostoma lanceolatumexon
Blg00963.6-exon-Sc0000003-1570713199:4272580..4272678Blg00963.6-exon-Sc0000003-1570713199:4272580..4272678Branchiostoma lanceolatumexon
Blg00963.6-exon-Sc0000003-1570713199:4271531..4271629Blg00963.6-exon-Sc0000003-1570713199:4271531..4271629Branchiostoma lanceolatumexon
Blg00963.6-exon-Sc0000003-1570713199:4271007..4271105Blg00963.6-exon-Sc0000003-1570713199:4271007..4271105Branchiostoma lanceolatumexon
Blg00963.6-exon-Sc0000003-1570713199:4270320..4270418Blg00963.6-exon-Sc0000003-1570713199:4270320..4270418Branchiostoma lanceolatumexon
Blg00963.6-exon-Sc0000003-1570713199:4269647..4269745Blg00963.6-exon-Sc0000003-1570713199:4269647..4269745Branchiostoma lanceolatumexon
Blg00963.6-exon-Sc0000003-1570713199:4269016..4269114Blg00963.6-exon-Sc0000003-1570713199:4269016..4269114Branchiostoma lanceolatumexon
Blg00963.6-exon-Sc0000003-1570713199:4268410..4268508Blg00963.6-exon-Sc0000003-1570713199:4268410..4268508Branchiostoma lanceolatumexon
Blg00963.6-exon-Sc0000003-1570713199:4267949..4268047Blg00963.6-exon-Sc0000003-1570713199:4267949..4268047Branchiostoma lanceolatumexon
Blg00963.6-exon-Sc0000003-1570713199:4267459..4267557Blg00963.6-exon-Sc0000003-1570713199:4267459..4267557Branchiostoma lanceolatumexon
Blg00963.6-exon-Sc0000003-1570713199:4267009..4267107Blg00963.6-exon-Sc0000003-1570713199:4267009..4267107Branchiostoma lanceolatumexon
Blg00963.6-exon-Sc0000003-1570713199:4266674..4266772Blg00963.6-exon-Sc0000003-1570713199:4266674..4266772Branchiostoma lanceolatumexon
Blg00963.6-exon-Sc0000003-1570713199:4265086..4266093Blg00963.6-exon-Sc0000003-1570713199:4265086..4266093Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000003genomeSc0000003:4265086..4281516 -
Properties
Property NameValue
GeneIDBlg00963