|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000003:5060627..5068441- Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >Blg00959.0 ID=Blg00959.0|Name=Blg00959.0|organism=Branchiostoma lanceolatum|type=mRNA|length=7815bp|location=Sequence derived from alignment at Sc0000003:5060627..5068441- (Branchiostoma lanceolatum)
AACGATTTCACACGGATTCTAAACAGTTTCTGAAGTAAACATGTACCCAC
CATTTTGGATCAGCTGGAAAGGACCGATGACGAAGTCACTCCTGATTGGT
CAATTTGTGCCGTAAGTCTGTCGTAAAATACTATAATGTCGTAAACTTCT
GCATAGACTATGCCGTAAACTGGGCTGGTCCATAGTCAAAAAAATGGCGC
CTGTTTTGGTTTTGGATAATGGAGCTTACACGGCAAAAGTCGGGTTTTCC
ACAGAAAAAGAGCCGAGGTGTGGGTTTGTTTGTGCGTTTCTTGATAGCTA
GAGAGTTGGTGTGTTAATCTTGACTTTGATATAATTCTGCAGACATATTG
CAAGGCTGTGAGCATCTGATAAACCTCACTAAAACTAGCATCCTAAAATT
ATTTCAGGTTAATTCCCAACTGCGTTATGAAGTCCAAGGCCGAGAGGAGG
AAGACTTTTGTAGGTAACCAGATAGACGAGTGTAAGGACCTGTCGGGGCT
TTTCTATGTGCTACCTTTCCAAAAGGTGAGGAACATCAAGTTTTAAATGT
TCTTCTGTGATCATAGCATTGTCAATACCCTGGGACTATTGGTTACAGCC
CTATGTTCCGAAATCCCTATGTTCCGAAATCCCTATGTTCCGAAGTCCCT
ATGTTCCGAAGTCCCTATGTTCCGAAATCCAATTAGTCATTATTTATTTA
CTAAGTACTTCTTACAACGAACGGTAAAAGAAAGTACACTTTAGGCTTGA
CTTTAGTGACTTCAGTTACGACGGTATAGGAGAAAATCGCAAAATTCGCA
CCGACATTTTGCGTGTATCCAAATTATTATGACGCTGCGGGCGTAAGGAT
GCCGTCCTCCGTCAGAAAATCCAACTCCTTTGTTTTTTTGGTATTGTTAT
TCTTGAATACAATCGATGTCGGCACCTTTCGCATATGTTGTTCACATTAA
AAACTTGTTTGTCAAGATTGAAGTCGGTCTTTCTAAGTTTATACAAGCGT
CATTCATGTTATACTTTTTCTGCAAACTATTTCCTGCGACTAAAAGCCGA
AAACCTCAAAAGAATTTGTATCGAAGGACCAGCCATCGATCAATTCCATT
TCTATCGGGATATATAAAAGATAAACTTGAAAAATGAAACGTATTTCCAC
CGCTGTAATATTCAGTACACAGGCCGACTCAAACATCCGAGGACGCCATG
TTGAAGTCATGAATATGCAACATGCCCGCATGTTCTGAGCTCTGATTAGC
TCAAATTATATAACCTGTGCTCTGATTGGTTGATTGAAAAAAGCATTAGT
GTTTCACGTGATCAAGATGCGCGAGTCTTTCACAACAGTTTGTAAGTTGT
AGCAAAAGCTACCCAAAATAAACCGCGTTTTGGAACAATTAAAGCAGTTT
TTTGCGGCCTTCGTTTCGATATCGATGAAAATGTAGCCAAGCCTCTTCTG
CAGACAACATTTGCTTAATTTTCGAAACAAAATTAAATACATGTATATCG
TATATGCGTGGCGGGAAACTTCCGCAAGCGCTCCTCGGCGTAAAATTATG
TTGCAGCATAAGACATACCTTTACTCAACAATTTTGCCTCTCAGAATGCG
GAAATAGCGCTTAAGAGGTTTCAAAATATCAACATTTTACCTTGCGCTAC
CGAAAAAATTGATAACACCCGTTTGCTCAAAAACCTCGCGAACTCCTGTC
TTGCTAAGTTTCGCGAAATTAAGTGCTCGCGAACATAATAGACTTACAGT
ATACGAAGAAAAATTTTCAGTGCGGAATGAGGTCAAATATGCGATGTATA
TGTGTGATGGAACATTCACTAGGATTTCGGAACATAGGGACTTCGGAACA
TAGGGACTTCGGAACATAGGGATTTCGGAACATAGGGATTTCGGAACATA
GGGCGGTCACCGGGACTATTGACATGTCCAGAATCATCTTGTTACTATTG
ACAGGAACACTATAACAAAAACATGAGGCTTTTGACAGAATGATCCAGTC
AGTGGTAGAAAAATTTGCAAGTTGTTGTCGGGATAATTGTGTCAATATAT
GATCCTGTCAATAGTGCAAATCCTTTCACTATTGGCACGATGATGCTGTG
TTATGTGTTATCAATGTCAGTGCAGTTTTAAATGATGTTTGGTTTTCCAA
CACATCTTCGACAGTAAGTGATCAATTGTGCTGTGTACTGGACTCATCGT
TTTATGTGTTTCTTTTGTCCTGTTTACACACATTCTATAACTTTTTCTGC
AGGGTTACCTGGTGAACTGGGATGTACAGAGACAAGTGTGGGATCACATC
TTCAGTAAGGATGTCCTGAATGTGAGTTTTCCTCTCCTGTATTTGCACTC
AACTTACCTCTTTGTTTTGGTGGTTTCTGATGATGTTCTTACAGCTTTAT
TGACAGAAATGATCTAATCCCACTGTCAATTGAATTAATTGTAATTTTCT
AATTTTTCTGCAGGTAAACTTTACCGACACTATTGCCATGGTAACAGAAC
CCTTCTTCAACTTCACCTCAATCCAAGAGTCCATGAATGAAATCTTTTTC
GAAGAATATCAGTTTAAGGCATTGCAGAGGGCAAATGGTGAGCCAATTAA
ATATGACTGCTTCTAGTAATAAAAAGATGTTTCTGTCATACCTGTTGCTA
TGACAGCCTAGCTGTAGCCAGGTATAACTTGCAGTTCTTAGTATCATGCC
ATACATATGGCCTCCTTCGGTTAAGATTCACCATGGTAAAATCCTAATTC
ACATTACGCTACAGCATTGGCTATATAGCTGAAAAGTCCTATATGAGAAT
GACAGTTTTTGCCACAAACTTGTAAGTCACATCTGTAATTATAAGCTGAT
TCGTTTCTGTCTGAGTTGCAAAGTTCTTTTCTACAGATCCACTTTTATTC
TAGCTATCACAGTATCAGTCTAGCTTATCATGATTTTAATTGCCCAGACA
ACATCATGCAACAACTACTACCGTGAACCTAAAGTTCTGTGAAAATTTCA
AATTCTCTTATACCGTGAAATTTTGGTACCGTGAACCTAAAGTGAATTAC
AGTATGTGATTTGGGTCCATATGATCATGTGATGGTCATATAATGATGAT
CACATGTCACTCTTTCCTTCAGGTTCCACCTGGAGTGCTCACAAGTACAG
CAGTACTCAGCAGAAGAAGCCCCTGTGTTGTGTTGTGGTGGATACTGGGT
ACTCCTTCACTCACATCACACCTTACTGTAGGGGCAAGAAGATGAAGGAT
GGCATTAGAAGGTTTGTTCTATTAGAAGGATGGCATTAGAAGGTTTGTTC
TATTAGAAGGATGGCATTAGAAGGTTTGTTCTATTAGAAGGATGGCATTA
GAAGGTTTGTTCTATTAGAAGGATGGCATTAGAAGGTTTGTTCTATGTTT
AAATCATCTTTCCTCAACCCAGGATTGATCATGAGGTGTTCAAAAGTTTC
TTTTTCCCTTAAACTGTCGTAGAGTGGAAGTTGTTGCCACCAAGTACAGT
AGGGGCTCCTCACTAGATAGCTTGAAGCAATGCTTGCAGCTAGATGTGCA
AAGGTTAGGTGTGACAGGTTCATTCAGTGTGATATAACCAGCTGCTGCCG
CGCCGCACCGCACCATATGCCTTCACAGCAGGATTGAGGTGTTCAAAACT
TTGTTTCTCCCTAGAACTATCGCAGAGTCAGAGTGGAAGTCGTTGCCACC
AAGTCCACGGCCAGTAGGGGCATCCTCACTAGATAGCTTTAAACAATGCT
TACAGCTAGATGTGCAACGGTTAAGTGTGACAGGCCGTCCTGTGCAATAT
AGCTAGTGGCAGCCTTACATGTGTGTGAAACTGGTGTCCTATGCTGAAGG
GCGGTTATAACGGCTATACAAATACAGAAGCTGGTGTATATGTGTTTCCC
CAAAGTGAGGTTAAATCGTCTATACAGAATCTGTATTACAGACACAGATC
ATGTTCATTGCATTTGAATGTAGAGAATAGCTTACTGCCATACATGAATG
TAGTTTCATGTTTTCTTTCCTTATTTTCGTAGATTGAATGTTGGCGGTAA
GATGCTGACCAATCATCTGAAGGAGATCATCTCGTACCGACAGCTCCACG
TTTTGGACGAGACGTACGTCATGAACCAAGTCAAGGAGGATGTCTGCTAC
GTTTCCTCGCAGTTCTACAAGGACATGGAGACAGCCAAGTAAGTGTGTTT
GTTCTTGTTTATGAATATTGTACATGTACGTGTCCAGGGACACTGCAAAA
ACAGGCTGCAGGCCTGAGTAGTTATTTTCCCCTGGTAAAATAGATAAAAA
TGAAACATCTCCTCACTTTTCTACAAGGACATGGAGACAGCCAAGTAAGT
CATGTGGTCATCACATGATCATCACATGACTAGTGCATGATTGTCACATG
ACGGGCACAGGCTTCAGGGTCTTTGATATATCAATCCTCCTTTTGTACTG
TTTGTACCCTTGCAATTAACTTACGGGTAAAAGAAAATTTTATGGTTTCG
TATCAAAGTGCGAACCTTTTTTTGAAAATGTCTTAACTACAAGATAGCTT
GTTTGAAGAGTAACTTAAACTTAAACTGTGTTCCTTTTTTTGCAGACTTA
GAGGGAAAGACAACACGGTGCTAAGAGACTATGTCTTGCCAGACTTTTCA
CAAATCAAGAGAGGTTATGTAAAGGTACGTACATGTAATTCTCTACCACA
TTTTATGACAGACTTGTTATTATTAGTTTTTGAATTGTTGTCTTCAGTGG
TATTCTTTGCGTTGTATTGGTCAGAAGATATGCTTTGCTATTCGAAGATC
CTTTGCAAGACTCAAAGAAAGGAAAATAGATAATTCATGAATAGTTCCAA
ATTGTTGTTTCATCTGTATTTTGCTTTCTACAGCCCGTAGAAGAAATGAA
CTATGCTGGAAAATACAAGGGAGGTGAACAGATGATCAGAATGGCCAATG
AGAGGTTTGCTGTTCCAGAAGTTCTCTTCCACCCCTCTGACATTGGCATC
CAAGAAATGGGTATCCCAGAATCCATTGTGCACGCTGTAGAAGCCTGCCC
GGAAGGTGGGGGCAATGCCTCTTCTGATTGGTTGACATAACAGCAATAAT
GTTTACTTGAAAGCTGTATAGCCAATCGTAGATTGGTTTAGATTCCATGA
CATCTGGTGATTTTTCCTCTTTTATTTTCTGCAGAAATTGTTTCGCCTTC
CTTTCTTAGGGCTCCCTTGGGAATCAGTTACATGTACTTAAAGTTTACTA
CAATGAAATAGATAAAGTAAAATCTTTGAGTAAGACTGTTGAGATCTGTA
CATTGTACTAGAAATGACTACCAAGGTAGTACAGATTGTCTGCTTATTTT
GATTGTGTCCACGTTTTGTTTCTTAAATGTTGCAGTTGTTGACTACGAAT
ACCATTTTCCCCTTTTCTACAGAAATGCACCCCCACATGTACATGAACAT
CATACTGACAGGAGGAAATGCACTGTTGTCAGGATTCAAGGAAAGAGTGT
AAGTATAAACCCTGTATAAGCCTATCAATCCATCTATAGTATGTGCAAGT
CAGACAACAAACAGTTACTCAAGCAACAGGATAGATTTTGTAAATGGTCA
GACGTTTCAGGTAGCGTCCACTATCTTTCGTCAGTGACCGTTTCCAAAAT
CTATCCAGTAGCTGGAGTAACTGTTATCTTGCATATCTATTTACATATTT
GTACCCGGATATCTAGCCTTTATCAACACATCTATTGTATAGCTATAATT
TGTCAATGACCAAATTTAAAGAAAAGCATTAGGTTTGGATATGATGAAAG
GGATGTATGAAAAAATGGTTAATGAAGTCCTATATATCCTAGGAATCAAA
CCAATGACGTCTCGATCCTGTATCTGCTAGCCTAAGTGCAAGTCCATCAG
CGCAACTGTGGTACTGTGAAGCACAAGAAAAACACTTGATCTTGCTTCCC
AAGAAAATAATCAAGAAGGGTCTTACAATTTTATAAGTTTTACTGAATGA
AGATTATTTTGTACTTTTGACAGATTCTCTGACCTAAGAGCACTGGTGCC
ACAGCAGCTGGATGTCAGAGTTCACCAGCCTGACCGTCCAATCACGTACG
CCTGGGAGGCGGGCGTCGCCCTTAGCAACACACCTGGCTTTGACAAGATG
CTGGTTACCAGGCAACAGTACGATGAATATGGACAGAACATCTGTTCTGA
GAAATTTGATGTGTGATATTGTGTCATGTGTTTTGGTTGCTTAGGAAGGA
CAAAGCTGATGAGGACTTCAATTTGTAAACTCTAAAACATCTGGCTGTCC
AGGCCCAAAGAAACAGAGCTGTTGTTAAAAGTACATTTTCTTGCCTTTTT
TTATTCAGCTGGCCTGTCCATTTGAACCTATAGCTATTAAAGAGTAAAAT
TAATTGGAGTAACTATTTGAACATTCCTAAGTGTCTGTCTGTAATGTAAG
AATTGTGTATTTCTAGTTTGGACCAAATAGCAGCCAATACATTTGCTCTA
TCAAACCTTTTTGTCTTGTTGTTTTTAACTACCCTTTGCAAATTCTAATA
ATCAAGATAATGATGTACAGGGCTTTAAATTTGTGAGTCCTATGTCCTAA
ATCAGCATTCAGAGAAAATCATGGACTACAAGGCCCTCATCTCGTATCTT
CCACCTTTATTGGACTCTATCATCATCTGCAAATATTATCATAATTTTGA
ACCATACATGATTATCATGTAATATCTTATAGATCATATCAACTATGTGC
ACATGTGGTATGTTCAGCTTCTAACTTACACCGTAAGAACCCGTGAAACC
TATCACTTACAGATAGCATACTCTTTTTTTGTATTTTGGTTAAATATGAT
GTAAGATAAACACTGGTCTTCCACCTTACTTTTGGGCTTCTTACAAAAAA
TCTTAAGGAACACAATGAGCACCAAGTTGAACACAAGTGAAAATTCTTCA
CACAAAACTTCTTAACAAACATAATCATTGATAGATTTTTTTCTAGCTTT
CCACCCCATGTAAAGGCGATGTCTTTCTTAGAATATCAGCATACACCAAC
AACCTAAAAACACCAAAGCTACAAAAGTAACAAAAGATCCTTAACTTAAT
CTGAAGGTTTACTTTCGAAGCAAAAATTATGCTTGACTTTCCTCACTATC
TGCAACAAAGTTACGATGGATTTATAATCCATCAAGTCGTCCATGGAAAA
TACAAACTCAGTAACAAAAATCTGGTCCACTTCAAAAACAGTTACGAATA
TCAACAAGTCGGTGAAAGTAGGTGCTCACTGGTTAAAGCTTTCGTTAAGT
CAAATAACTTAAATCTTAACAAACTTGTACAAAAGAATGTTTCCTATAAA
AATATGCTCTTATAAAGCCTCTTTGCAACACCAACACAATGTTACAAACT
GGGTGTAGTTGTAACAGTTTCCAGACTTAATTTTCTTTGTCCATTCATAT
TCCAATATTTTTAACCTCCTCCAAGCTACCTATCCCTGGAACCAATACAA
TCTTGGTGCCAAAAGGTTGGCTCAACAGGGAGAAGGTTAAAACCGTAGGT
TGTTGTGAGTAAAATGCCTGTGAAGATGGCATTTCCTTCAGTGTGCATAT
CAGCATTTGCTTCTGTATCAGTCTTTTTCTCCAGTCTTTGTCAAAATAGT
ATCGAAAATACATCTCGTTCTATAGTTTCCACATCACAAAATATCCCAAC
AAGGCAATGACCCTACTTGTACGCATCACCCCAAGTAAGGGGACAGCAAC
GCTTCTCTGGAAACTCTGAGGTAGCTACTCCAATACAAACAAGAACAGAA
CTAGACAGTTGTTAT Coding sequence (CDS) from alignment at Sc0000003:5060627..5068441- >Blg00959.0 ID=Blg00959.0|Name=Blg00959.0|organism=Branchiostoma lanceolatum|type=CDS|length=1200bp|location=Sequence derived from alignment at Sc0000003:5060627..5068441- (Branchiostoma lanceolatum)
ATGGCGCCTGTTTTGGTTTTGGATAATGGAGCTTACACGGCAAAAGTCGG
GTTTTCCACAGAAAAAGAGCCGAGGTTAATTCCCAACTGCGTTATGAAGT
CCAAGGCCGAGAGGAGGAAGACTTTTGTAGGTAACCAGATAGACGAGTGT
AAGGACCTGTCGGGGCTTTTCTATGTGCTACCTTTCCAAAAGGGTTACCT
GGTGAACTGGGATGTACAGAGACAAGTGTGGGATCACATCTTCAGTAAGG
ATGTCCTGAATGTAAACTTTACCGACACTATTGCCATGGTAACAGAACCC
TTCTTCAACTTCACCTCAATCCAAGAGTCCATGAATGAAATCTTTTTCGA
AGAATATCAGTTTAAGGCATTGCAGAGGGCAAATGGTTCCACCTGGAGTG
CTCACAAGTACAGCAGTACTCAGCAGAAGAAGCCCCTGTGTTGTGTTGTG
GTGGATACTGGGTACTCCTTCACTCACATCACACCTTACTGTAGGGGCAA
GAAGATGAAGGATGGCATTAGAAGATTGAATGTTGGCGGTAAGATGCTGA
CCAATCATCTGAAGGAGATCATCTCGTACCGACAGCTCCACGTTTTGGAC
GAGACGTACGTCATGAACCAAGTCAAGGAGGATGTCTGCTACGTTTCCTC
GCAGTTCTACAAGGACATGGAGACAGCCAAACTTAGAGGGAAAGACAACA
CGGTGCTAAGAGACTATGTCTTGCCAGACTTTTCACAAATCAAGAGAGGT
TATGTAAAGCCCGTAGAAGAAATGAACTATGCTGGAAAATACAAGGGAGG
TGAACAGATGATCAGAATGGCCAATGAGAGGTTTGCTGTTCCAGAAGTTC
TCTTCCACCCCTCTGACATTGGCATCCAAGAAATGGGTATCCCAGAATCC
ATTGTGCACGCTGTAGAAGCCTGCCCGGAAGAAATGCACCCCCACATGTA
CATGAACATCATACTGACAGGAGGAAATGCACTGTTGTCAGGATTCAAGG
AAAGAGTATTCTCTGACCTAAGAGCACTGGTGCCACAGCAGCTGGATGTC
AGAGTTCACCAGCCTGACCGTCCAATCACGTACGCCTGGGAGGCGGGCGT
CGCCCTTAGCAACACACCTGGCTTTGACAAGATGCTGGTTACCAGGCAAC
AGTACGATGAATATGGACAGAACATCTGTTCTGAGAAATTTGATGTGTGA
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg00959.0-exon-Sc0000003-1570713199:5068175..5068441 | Blg00959.0-exon-Sc0000003-1570713199:5068175..5068441 | Branchiostoma lanceolatum | exon |
| Blg00959.0-exon-Sc0000003-1570713199:5067917..5068034 | Blg00959.0-exon-Sc0000003-1570713199:5067917..5068034 | Branchiostoma lanceolatum | exon |
| Blg00959.0-exon-Sc0000003-1570713199:5066121..5066189 | Blg00959.0-exon-Sc0000003-1570713199:5066121..5066189 | Branchiostoma lanceolatum | exon |
| Blg00959.0-exon-Sc0000003-1570713199:5065855..5065978 | Blg00959.0-exon-Sc0000003-1570713199:5065855..5065978 | Branchiostoma lanceolatum | exon |
| Blg00959.0-exon-Sc0000003-1570713199:5065181..5065319 | Blg00959.0-exon-Sc0000003-1570713199:5065181..5065319 | Branchiostoma lanceolatum | exon |
| Blg00959.0-exon-Sc0000003-1570713199:5064268..5064409 | Blg00959.0-exon-Sc0000003-1570713199:5064268..5064409 | Branchiostoma lanceolatum | exon |
| Blg00959.0-exon-Sc0000003-1570713199:5064098..5064111 | Blg00959.0-exon-Sc0000003-1570713199:5064098..5064111 | Branchiostoma lanceolatum | exon |
| Blg00959.0-exon-Sc0000003-1570713199:5063768..5063846 | Blg00959.0-exon-Sc0000003-1570713199:5063768..5063846 | Branchiostoma lanceolatum | exon |
| Blg00959.0-exon-Sc0000003-1570713199:5063387..5063558 | Blg00959.0-exon-Sc0000003-1570713199:5063387..5063558 | Branchiostoma lanceolatum | exon |
| Blg00959.0-exon-Sc0000003-1570713199:5062944..5063019 | Blg00959.0-exon-Sc0000003-1570713199:5062944..5063019 | Branchiostoma lanceolatum | exon |
| Blg00959.0-exon-Sc0000003-1570713199:5060627..5062418 | Blg00959.0-exon-Sc0000003-1570713199:5060627..5062418 | Branchiostoma lanceolatum | exon |
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000003 | genome | Sc0000003:5060627..5068441 - |
Properties
| Property Name | Value |
|---|
| GeneID | Blg00959 |
|
