Blg00950.1 (mRNA) - B. lanceolatum

Overview
NameBlg00950.1
Unique NameBlg00950.1
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000003:4323277..4326702-

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg00950.1 ID=Blg00950.1|Name=Blg00950.1|organism=Branchiostoma lanceolatum|type=mRNA|length=3426bp|location=Sequence derived from alignment at Sc0000003:4323277..4326702- (Branchiostoma lanceolatum)
TTGCGTCCTATCTTGTGTACACGGATATACAATGAGATAGATTACAACTG TCAAGTTCATCTTTAGAAAACCAGGCACCGTAACTGACTCAGGAACTACA GCACTCGAATCTTAAGAAGAAAGAAAATTGAAGATTAAGTTGCTAGGGAA AGGTGACTTAAGGTCAAGACGCCATGCCGCGCCGTCTTTATTTTGTTTGG GCAGACGTTAATCTTGTGGTGTAGTCAGACGGCCTGGGGTCGACAGGAAA AGTGGTATCGAGAAAATCTCTTCCGGTTGGGGAGTTTTCACAGCTGGAAA TGGCGGGAAACGTCTGTTGAGGACGAGTCCATTTTGCGCGTTCTGTGGGG TGTTCTACCTGTGTTTTTGTTTGGTTATTACATGTTTGGATTTTTTTACT TATATATGTACAATTTACAATAAATATACAACTTGCAGTAAATGTATAAT CTAGGTGTTGTGGTGTATATTGTTAATGTCACTGTTTTTAATGTTCAAAC AGGATAACCTAAAACAGGTCTAATAGAACAGAGCTGCAAATTCCGGGATA AACAAAATCAAAGTGAAAGCGAAAGAATGGTATGATGATAACACAAAAAA AATGGTATAGATTATTTCTAAGCATGGGAATTGGTCTTCGGTGTGCTATC ATTTAAAAAAGTTAGAATACGTCAATGTTTAGGGTTTTCTAATCCACCTA GCGACTCCTTCCCAAACTGCACATTGCATGATGTATATGTTAATGCCTCT CTTTTTTTCAAATCCGTTTCAGAAGCTGAAGGGGCCGTCATTGGTAGGTC GGAACCCAGTCTGGACAGAGTGAAGAGGCAAAATGCTGTGGCAAAGGATG ATGGTAGGTTTAGTATGATACGATGTCTTTATAAGAATTAGTTTGAAGAG GTGCTTTCTGGATATACAGAATTGATAAACCCAACAAAGTTCATGCCTAA CACACTTCACCCCTCCGAGTCATGTATGTAGAAACATTCGTTAGATTTTT AGAATGGACACTTGTTACCTTTAATTGTTTGTACTCTTGCAATCTTGAAT TTGTAAGTAAAGGTTGCTGTTGTATATGATCCTCTTGCTGTCCTGGACTA AGAAACCACACACGAAACTATCCTGCTAACGCTGTTTTAGCGTTGATGTT GCCTCTTTATCATTTTGCCGATATTGCTTACACCCAACTGAGGCGGAAAA AATTGCATCTTTACTGTTAAGGGTCGAATTTGGCATTGGAAGAAAAATTA CAGATAATAAAAATCGTCCTAAAACTATCAACAAAACAGTATACAAAGCC ATGTCTAAGCTACTCATCGGTGCTACAGAAATGACGCCACCTTCATCATG CCATCCTCTTCTCCACAGCTCTGATGAAGCAATTCATCTGGACGCCAGGG GTCGCTTTTTTCGGATGGGACGTAAAATGGGGGTCCCGTGATCGAGGAGG TGCCGTTAAAGACGTTAAAAGGCACTACAGCCTCTTTACTTAGACGGGTA TCTACAGACTGTACTTCAGATGAATTTGACTTCTCTATTTGACCCCACAG CTCTGATGAAACAATTCATCTGGACGCCAGGGGTCGCTGCCTCAGTGAAG GATGACATGGAAACGCAATTACAGGCAGAGTCTCCCACAGACTGCGCCTC TCGCTGTGCGGAGAAGGGTCGGGCCGAGTGCTTGTCGTTCGAGTACGTCA AAGTCCGTAAGATGTGCCTCCTGAAGAAGGGGAACTCTTACACGGTAGGG CTGCGACTTCGCCTGGAGGCTGGCTCAGACTTCTACGAGTTACGCGAAGG TGGGTTTTATGTCAATACAAAGCCAAAGGTTACTCAAGCAACTGGATACG TTTCATAGAAGGTCAGGCGTTTCGGTCAGGATCTGCTTTCTTTCGCTAGT GACTAAACAGAATCTGGAGTGAAGCATGTATTCAGCCATGTATGAGCATA TGAGGTACATGTATAAACAATTCTTAGACGGTTCGACTTCGTTTGTCGTC GTTTTTCAAAACGTACATTCCAGTTGCTTGAGTGACTTTTGTATTGAGTA TCTCATTACCTGGATGTCAGAACCTTTATCGACGTAAGTTTTATCTGTCT TCATCACTGTACACTCAGTATAATCTAATGAATCAAATCAACTTGTGCAG AAGAGTAGATATAGCACTGAAGTTTTCTCCATCAATTTGGTAGATTTTGA AGAAACATTTGCAACGTCACTTTCACAGTTATATTAAGTAAAGTATTTTC ATTTCATTTCTGTAGGATTAAAACCACAAGTCATGAAGTTTATATCATTG TATACAAGCAGCGCCTAGCGAATCGATTTAGCACAATAGTTTTTTCTCCA TTGGAAAATGTTTTCGCAGTTATATGTAAAATAGAGTTTTTTCTTCCGCA GAACTAAAGCCACAACTCATGAAGCCGAATGAAGAGGAATCTTCGGTCGC TCGTGCAAAGTCGGAGCCGAACCGAATGGACCCGAGCAAACCCGAAAAGA AAGCCGAGAGCGGCGGACGAAGGGGTGGTGGCAAGAACAGAGGAAAGGGA AAGGGAAGAAACCGCGGGAAAGAAAGGAATCGACAGGATGAAGACGTTTT TCTGAGGAAGCAAGGAGAGCGGGATGGTGAATTGGATGACACGCAACAGA CCACTCCTGCGATAGAGTTCACAACGCCCGGGAAAGAGATGAAAAAACTT GACGTTGTTCCAACAACCATCCCGACCCCTGCAGCGAACAAACAACCGGC TAAAGTGGACAGGAAAAAGAAGGGAGGCAAGAAGCGAGAGAAAGGGAAGA AAAGAAAAGATGGAAAGAGGAAGGGCGGGAAGGGTAAGAAGAGGAATGGG ATAGAAGACAACAACCGGGTTGCATCAAAGTTCAAGGAAGCCGGCGTCAT ACCGGATGTGCTGGACAACCCTCCCGTGGAGAAAGCGGAAGTGAAGTTTG ATGATGTCAGGGTCAGTCTCGGTAAGACTTTGACCCCTACGGACACTAAG AACGAGCCAAAGGTCACGTGGCCTGCCGAAGACGGTCAGCTGTACACGCT GGCCATGCTCGATCCGGACTCGCCCAGCCGGGCAGACCCACGCTATGGGC AGTGGAAGCACTGGCTTGTGGGTAACATTCCCGGAAATGACGTCAGAAGA GGTGACGTCATTTCCGAATACATCAGCCCAATCCCCCTGGTCGGCACGGG ACTGCATCGCTACGTCATTCTGGTGTACAAGCAGACGAAAAGGCTGGATT TTGACGAACCGAGGCAGACGAGCATAACGGCTAGGGGCAGGGGGTTGTGG AAAATCCGGGCGTTCGCAGAAAAGTACGAGCTAGGGGACCCCGTGGCGGG AAACTTCTTCGAAGCGGAATGGGACAAGTGGGTTCCGAAGGTGTATGACC AGCTGGCGACCAAAAGAAAGAAGTAG

Coding sequence (CDS) from alignment at Sc0000003:4323277..4326702-

>Blg00950.1 ID=Blg00950.1|Name=Blg00950.1|organism=Branchiostoma lanceolatum|type=CDS|length=1368bp|location=Sequence derived from alignment at Sc0000003:4323277..4326702- (Branchiostoma lanceolatum)
ATGTATAATCTAGAAGCTGAAGGGGCCGTCATTGGTAGGTCGGAACCCAG
TCTGGACAGAGTGAAGAGGCAAAATGCTGTGGCAAAGGATGATGCTCTGA
TGAAACAATTCATCTGGACGCCAGGGGTCGCTGCCTCAGTGAAGGATGAC
ATGGAAACGCAATTACAGGCAGAGTCTCCCACAGACTGCGCCTCTCGCTG
TGCGGAGAAGGGTCGGGCCGAGTGCTTGTCGTTCGAGTACGTCAAAGTCC
GTAAGATGTGCCTCCTGAAGAAGGGGAACTCTTACACGGTAGGGCTGCGA
CTTCGCCTGGAGGCTGGCTCAGACTTCTACGAGTTACGCGAAGAACTAAA
GCCACAACTCATGAAGCCGAATGAAGAGGAATCTTCGGTCGCTCGTGCAA
AGTCGGAGCCGAACCGAATGGACCCGAGCAAACCCGAAAAGAAAGCCGAG
AGCGGCGGACGAAGGGGTGGTGGCAAGAACAGAGGAAAGGGAAAGGGAAG
AAACCGCGGGAAAGAAAGGAATCGACAGGATGAAGACGTTTTTCTGAGGA
AGCAAGGAGAGCGGGATGGTGAATTGGATGACACGCAACAGACCACTCCT
GCGATAGAGTTCACAACGCCCGGGAAAGAGATGAAAAAACTTGACGTTGT
TCCAACAACCATCCCGACCCCTGCAGCGAACAAACAACCGGCTAAAGTGG
ACAGGAAAAAGAAGGGAGGCAAGAAGCGAGAGAAAGGGAAGAAAAGAAAA
GATGGAAAGAGGAAGGGCGGGAAGGGTAAGAAGAGGAATGGGATAGAAGA
CAACAACCGGGTTGCATCAAAGTTCAAGGAAGCCGGCGTCATACCGGATG
TGCTGGACAACCCTCCCGTGGAGAAAGCGGAAGTGAAGTTTGATGATGTC
AGGGTCAGTCTCGGTAAGACTTTGACCCCTACGGACACTAAGAACGAGCC
AAAGGTCACGTGGCCTGCCGAAGACGGTCAGCTGTACACGCTGGCCATGC
TCGATCCGGACTCGCCCAGCCGGGCAGACCCACGCTATGGGCAGTGGAAG
CACTGGCTTGTGGGTAACATTCCCGGAAATGACGTCAGAAGAGGTGACGT
CATTTCCGAATACATCAGCCCAATCCCCCTGGTCGGCACGGGACTGCATC
GCTACGTCATTCTGGTGTACAAGCAGACGAAAAGGCTGGATTTTGACGAA
CCGAGGCAGACGAGCATAACGGCTAGGGGCAGGGGGTTGTGGAAAATCCG
GGCGTTCGCAGAAAAGTACGAGCTAGGGGACCCCGTGGCGGGAAACTTCT
TCGAAGCGGAATGGGACAAGTGGGTTCCGAAGGTGTATGACCAGCTGGCG
ACCAAAAGAAAGAAGTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg00950.1Blg00950.1-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg00950.1-exon-Sc0000003-1570713199:4326249..4326702Blg00950.1-exon-Sc0000003-1570713199:4326249..4326702Branchiostoma lanceolatumexon
Blg00950.1-exon-Sc0000003-1570713199:4325850..4325930Blg00950.1-exon-Sc0000003-1570713199:4325850..4325930Branchiostoma lanceolatumexon
Blg00950.1-exon-Sc0000003-1570713199:4324904..4325152Blg00950.1-exon-Sc0000003-1570713199:4324904..4325152Branchiostoma lanceolatumexon
Blg00950.1-exon-Sc0000003-1570713199:4323277..4324301Blg00950.1-exon-Sc0000003-1570713199:4323277..4324301Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000003genomeSc0000003:4323277..4326702 -
Properties
Property NameValue
GeneIDBlg00950