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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000003:8523004..8531409+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg00948.1 ID=Blg00948.1|Name=Blg00948.1|organism=Branchiostoma lanceolatum|type=mRNA|length=8406bp|location=Sequence derived from alignment at Sc0000003:8523004..8531409+ (Branchiostoma lanceolatum) AAAACGTTTAACTGCGGAGGCCAGCCTTACTCATTGAGACACCTGTTGAG
TCTAAGATCTCAAACCGACTTCTGAAGATGTCCTGGCTACAGAGAGTAGT
CAGACAGCAGGGCCATACTTTATTCCGCGTCTGTGGCGCACGAAGTTTGA
CTGCTCTGAGAACGACCTACCGTCCACAGAGCACCAAGACTGAAGACAGC
GTTGCGAACATGACAACCGCCAGGCCGTTCGAAGAGATCCCTGGGCCGAA
GGGTCTTCCCTTCATCGGGACGGCGTTGGAGTATACCCCGTTTGGTGAGT
ACAGACAAGATAGCCCCATGTAGGCCATATTTTACTAGTACCTTGTGGGA
CAAGATACTGGTAGTATACAAAATGTAGGTGAAAACTCCCTTTTGAGACA
CCTACTTTCGAGATTTCCCGGTTTTCCCAGTTTCTGTGAACCGTTTCAGC
ACCTTCCTCAGTGACTTTCGGTTGCCAAGTATGTCATGCGTTGTATGGTG
CGTTATATACTTCGCTTGTCTTAAAGTAGGGGACATGTAAAGGATACGAC
GCCCTCTTGCTTACGTGGCAAGGGCAAATCAATTATATTGTTGACACACG
GACAATGTCCTTGGTTGACATATGATGTGGGTCATGACGTCACAGTAACC
GTTCAACCAGTGGAGCTGATCTCCAAGCAGATATTTGTCTCATTTACTTG
TTACATTAAAGAAAAAAGAGGTTGTATTTGTCTGTGTGTGTGTGTGTATG
TGTACGCGCGTGTGTATGTATGTGTGTATGTGTGTGTGTGTGTGTGTGTG
TCTTTTTTTTGGCGAACAAGAAAACAACAAACAGACCAAAAACATTATAC
CTCCCCGTGAATTTAATAGTAGCCTTTTCCACGATCCATTGACCCCACGA
CCTGGGCTGTTTTGTCTGATTAATAACGATTTGTTCTAAAAGCTCTGAAC
TATACTTCCTTTCACTTTTGCTGTCATCTTTACACTCATGTCCTGCTACT
CAGTACTGACAATGTATTCAAATAGCAACGGAAAGACACTGACCCACCGT
ACACAGTCCCTCCGTTTTCATGGAGGCAACGAAGAAAACCATCATTAGAT
CTATACTTTTTCTTTAACAAGTTTGCTAAGTGAAAGGCCACCTGGACCGC
CTCAGACTGGGCACTGAATTAACGCTTGATGAAGCAGCATCACTCCTAAG
TCAGAAACATCTCTCCTAAGTCAGAAACATCTCTCCTAAGACAGAAACAT
CTCTCCTAAGTCAGAAACATCTCTCCTAAGTCAGAAACATTTCTCCTATT
TAAGTCAGAAACATTTCTCCTATTTAAGTCAGAAACATCTCTCCTAAGTC
AGAAACAGCAAGTTTTACTAACTGACTCAATATGCGAAGCAGGGGTTACG
AAGGCTGCTCGCGGGAAATTCCCTATTCCATTTTAGGCCAAAATGGTTTG
ATCCACTCACACTCTGCCATTTATACGCCACACGACCCCACAACACTCTT
AGTATTTTGTTTTCACATAAAACTCGGACCACCCATAGAAAGTTGTATAT
TTCTCTCTCAGGTCGGTTTGCTGTCAAACCAAACTTCCGGGGCTCATTCA
GGGAGAGAACGAAGACCTACGGGCGCATCTACCGGGAGAAGATCGGGCCG
AGGGACTGGGTGGTCGTCAGCGATCCCAAAGAGATCGTGAAGGTGTTCCG
CAATGAGGGGAGATTTCCGGAGCGCATTGAGCTGACGAGCATGAAAATTC
TCCGGGAACAGAAGAAATGGCCGCTTGGATTAACAAACCTGTAAGTATTT
ATTCACGAACGCGCGCACAAGTGGCACACACACGTGTGTGCATGTGTATG
CGTGTGTGTGTGTGTGAGAGGAAGAGGGGGAGTGTGTGTGAGTGCGTGTC
TGTATGTATGTGTGCGTGTGTCTGTGTGTGTGTGTGTGAATGAGGACACA
TTTTTATCTGTTTTAATTAATCATCTAAAATAATGTTTTTCTCCAGTGAC
ACCTGAGAAACAGGTCTTAGTAAGATAAGTAAATGAAACAAAATTTAGAT
CCAGGCTTTGCAGAACTGAGGAAAACAAGATCAGACATTTTCTTTTCCAT
TTTACATCTTAGAAACGGCGAAGAGTGGCAGCGTGTGCGCAGCTCGGTTC
AGAAGGACCTGAATCGACCCAAGACTGTTCGCGCGTACGCCTCAAGGCAG
GATGACGTCACCAGGGACTTGGTTGACGTCATCAGCGCTCTGATAGAGAA
GGAAGGGAGCGGAGGTCAAATACACAACTTCATCAACTACGTGTACAGAT
GGGCACTAGAGTGTGAGTATGAAACCCCACGCTTGAGAAACAATCGTTTT
CAATGGAAGAGTCCTAGTTCACTATCTTGCACCGGGTCTGCAATTATGTG
TATTGACTGTTTAAAGAATGAGCAAGGGTTTACTTCGAATTCACGACTTA
ATCAACTCTTACATGATTGACTAAAGTTTTTCCCTTACATATAACATGTA
CTAACATAATTCCACCGTATGCTACTACGTCCAAACAGATGTCCGGCCCA
ACAAACCCAGTGAAATACACTCATGTATATCTGAACTGTGCATGCACTAG
AGATCTCTCAAACCCTCTGTTTTTCAAAGTGGTGGATTTACGTAACCCGT
CAGATTAATGTTAATGGAAGTAACATATTCCCACCCAGCGATCAGCGTAG
TTGTGCTGGACAAGCGTCTCGGTTGCCTGACCTTGGGTGACCTTGAACCG
GGTTCCGATGCACAGCTGATGATCGACGGGGTCAAGGACTTCTTCAGGGC
ACTTGTCAAGCTGGAGCTGACAGGAGTCGGTCTGTACAAGTACGTCAGCA
CGCCAACGTGGAGGAAGTTTGAGAGGGCAATCAACCAGTGGCAAGTGTAA
GTATTGGTCTGTGGTCACTAATTCTCCAAGCACGGTCAGGGGGCTAGTTG
TGGCCGGGATTTCTTTCGTCTGTTTTCTGGATATAACGAGGTGAGGGCGG
AAGGGCTAATGTTAACACGGACTGTAATAACATAACAAGGATTTGTCAAT
GATCCTATCATGCACGTGTTCGTTTCTCATGAACAGTATAGATGCATCTC
TCATCCAAGTATGTTCTTCAGCTGAATGTGTTCAAACTTCATTCATCAAA
GCCTGACCACTCTCTGGCACTATACCAATGGAGAGCGCGTTGTGTTAGGG
CCCTTCCCGTTTGCCCTTCCACTTTTCAGGCATTTAAAAGCGTGGTGGCC
AACACCTCTAAGCCAGAAAAATTGGTAACATCCTAATCCTGTTGATGTAG
ATGCTCTAACATGGACCAATAATTGTCCAACTTAACTGAAAACTGTCTGT
TACCATGGTGTTGGAAGCTGCTATGACCAACTTCCATAGTTACGGAAAAT
CCTGATCTCCTATTGGACAAAGTATTTAAGAACAATGAGCCCCTGTACCT
AAGATCTACCAAAGTGTGAAACTATTAGCTCTTTGATGTTTCTTTCACTG
TCTTTTCCAATTGGTATAAGGTGCCATATACAATTTCTGCTGCAATCGTT
TGGCCGATTCAGAGAATCATTAAGTGATTTTCGGTAGATTTTGTGTTTTT
TTGTTTTGTTTCCTATGGCCTTCATAGATTGGGAAACACAAAAATGTCAT
TCGTGATTTTTGTCCAGGAGCCTGATATACTAGTAGTGTAAATCTTTGTA
CAGCAGCTCTCAATATGACAAGTTTATACAATAATGTAGAATATTTCTGA
CATTACAACCTGCCCTTTGTTTCTTTGGATACCTAACTTTAGTATTGCTG
CCAAGTTACTGAAGGAAAAGCTGACTAAAAGTGAAAATGAGGGAGGAGGG
CCCGGTGATTCCGACACGGACTTCCTCTACAGCCTCCTGTCCAGGAAAGA
CGTCTCGTTCGAGGAGGCCATGATAATGGCCGTGGACTTGTTGGCTGCCG
GGATCGACACGGTATGTTTAACCTTGGTCACAGTTGCAAACAGGGTCCCC
GTCGGGTAGCTTACGTGCTGCAACAAAAAAAGTTAGTGTATATCATGAAA
TGTTTACAAATTATTCTCATGACTTTTTTTTACGTTTTTACGTTTTCTTC
AACGACAGCTAAGAAATAGTCAAAATGACAAGTTTTGGTTGCCATTGATA
GAAGGCTTTGTAGATTCTTGTTTTGTGATGAATTTGAGTTACGTCCTTTT
TTTTTAGGACCAGAACTCATTGAACGCCCTTGTACTGCCATTTAAAAAAA
TTAGTTGCTAGCGTAGTTCACATATTTATCTTTTTATTTCAGACAGGGAA
TACGTTGATGTTCAACCTCTTCTGCCTGGCGAAAAATCCGGAAGCTCAGG
AGAAATTTTACCGAGAGATAATGGAGGTGGTTCCACCAGGCCAGCCCATA
GACGATAAGATGTTAAACAAGATGCACTACCTTCGTGCCGTGGTGAAGGA
AACTTTCAGGTATGCATATAACACTAGTTCATCTAGATCCGCAGGGTAAC
ATATATCCGGTATTTCTAAAAACAAAGTATTCATATGCTAGATGCAACAT
CAGTGATACCGCCAGAAATGCAAACTTGACAGACTAACGTATTCAGTACG
CTGTCTGAAAAACTTTGATAACCCTGCATGGGACGACGACGTCAAAAAAA
TGTCTACCCCAGAATGGAACAGACTGTCCTCCTCATGGGAGGATTCGAAC
TACGATATTCTTTTTTTTAAAGAAAAATGTGTCAAATGCCACGCCTACTC
TTAAGTTATTTGTACATGTACAGAGGTAAGTGTGGTGGGTTCTGCGACTT
ACTAAGTTGTGGAAAGGTAGCCGTAATAGAGGGTGCTTCATCTGTCGAAC
CTCACTAAGCTGAGGACGCTGGCAGAAGGGGGTTTGGTTCATTTGTTTTA
AGGTGGGCGTATTCACTATCTGTAGTTTGACTTCAGAAGTACATGCCAGC
ATGTTTCTAACTACTGAGTGGGCAGAGACGCCACTCCTTTAATCTCCAAT
CAGATCTATCGGTGGCAAGGCAGTATCAAAAGGGCCAATGGGTATCCAAA
GCCACAGGAGATCTGCCATTTTTGAAAAGAAATGCTCCTCCCTGTTCGAG
TCATGACAGATCTACGGTGGTTTTGAATACTCAATGGTACTTTTTATACT
TCCTCGACACCGATAAATCTGCTTGGAGATTACCGCTCCATGGCCGCTAG
TCTACCAGGTGATGGCAGGTGCCCGTGACATCTTTAAGTTCATTTTTCTC
CTTTTAAAAAAATCTTTCAGGCTTTATCCAATTGCCCTCAACAGCCTGAG
AATGCTGGATCGAGACATCGTGCTGTCGGGGTATGTCGTCCCTGCGAAGG
TATGTCAGCTAGTTCGAGCATGTGGCAATAAACTACATTAATCATAGTAA
CATTTAGAACATGCACACGTATTTCCAAGAGGGAAAAGTAATGAGTAGAA
AGTATGTTAGATCAATATCTAGTCTAAGTTGTCGACTTAACTTCACAGTT
TGGAAATCAGCTTTCCTCTTTTTATAGTTTTTTCGTATAGTCTTTACGCA
ATTGTAAATACCTATTAAATCTTTTTTCATCAGCCACAAGAGGCATGGAT
ATGCACTCATAATTGCATAATCATATAATATCAGCTAGCTGGAAACATTT
GACGTTGTACATTTATGAAAGTTTGACACCAAGTTAACAGTTTAGTATCG
TTTTCAAAAGTAATGTCCGCATTTTATGCCGTTGTAGATGTTGAATTGTT
TAATTTGAAACAAGTAGATTCTGACCAAGACATTACATTCTCAATATGAA
ATGTTGAAGTACCATACAATAGTATATGTATTGGTAAGTGAATGTTTCTG
TACCTGAACGGTATTGTGACTCTACAATGAAAAAATACACTCAAAAACAC
CTTTCTGTTGCTTCTTTCTATCGGTAGCCTTCTTCTGATCGAATGACCAA
TAACTATGGGCATGTGACCCTATGGACGTCATCCATTGGTCAATGGTGAC
AGAAATGAAGGGCATCGTCCCCCAAGTAATGTCTTTGCAAAAATTACTAA
GAATTTTATGACATNATGTCTTTGCAAAAATTACTAAGAATTTCAAGACA
TTCTAAACCAAAGATCATGTCCATCAATGATGTACGATGTACTTCTCTCC
AGACCAAGATCTTAATGGCACATGACGTCATCAGCTCGCTTCCGGAATAC
TATCCGGAACCGGAGGTCTTCAAACCGGAAAGATGGCTTCGTGATGACGC
GTCCAGCAGTGTCCAACCGTTCAACTTACTGCCGTTCGGATACGGACCGA
GGATGTGTCTCGGTTTGGATTTCTCCCGGCGTTTCTGGAATTTCGTTCTG
GAATTTTGCTCTATAATTTTTTCTTGGAATTTTACTGAAATTTTTCCTGG
AATTTTTTCCTGGAATTTTTTCCTTTTTTTTTCTGAATTATTTCTTAAAT
CATTCCCAGGATTTTCCCTGGAATTCTGTTATGAAGTCTTGGCCAGTNTT
CCCTGGAATTCTGTTATGAAGTCTTGGGCAGTTTTTACTGTCAACCTTTT
AAAATGAATATCTTGATTCATTCATTAGGTCGGCGTTTAGCAGAGCAAGA
ACTGCATCTCGGATTGATCAGGGTAGGTACCGTCGACTTTGAAGGGTTAA
AGGTATGTCGTGTAACAAACGATAATCTTTGACCCTTGTTGCAGTTTTGA
TACATCGGTATCATAGAGACCTCTTTTTATGATAAACTTGCATGTTCTAT
ATAATACCTTATAATGGCATACACCATGGCATCTTAAGCAAAAATAGAAC
GCTTATTTGGTCTTGTCCTTTCTTTTATGTCATCAATCTACCATGTTTGC
ACTGTACTGTCACAAAACTAGTACCGTTTTAGTTTTGTCTTCTTCTTAAC
CATCATCAATAATACTTTATCATATAGCATTCTATATGATAAAGAAGTCA
AACTAGCCTAAGTAACAAATTTAGCTGATATTATGTTTTCATCTTGCAAT
TGTATACCATCATTTCGCTTTGGTGGCAAGTATCCGTCAGGCATGAATTT
GCAATAAAGATATTGTTATATTTCTATGTAGATTGTGCAAAACTTCCACC
TTGGATGGGCAGGAGAAGACATGAAGCAGGAGAACAGATTGACTCAAGCT
CCGGACAGGGACAGTGTCGTCTTCTCTGAAAGAACTTAAAGATAACTTTT
ACTAAGCACTCCATTGAATTCCCTTTACTAATGAGAAGCCAGTTGAGGCA
CGAAGAAGTGCTGAGGTCTTTTTAAGACTGTGGAATTAGTTCAACACGAT
TTGGTACAACTTGGTCAAGACTCTGTACCGGAGGATTAGCCGTTTTAGGC
TTTTGAACATTTATGAAGAGTGTAGTTCAGACAAGATTTCGTGTCAACCA
CCCCCTGCTACCTAGCTGGGTGCTGCATTACAACGCGTAGTTGACACGAA
ATCTAAACGATTTTGAGGTGTCTAGAGTATGTTATCCACAAAATCGAGTA
AGTGTGGCCTAAGATGGAAAAAAAATGACAATCAGCCTGATGTACACTCA
CACACTTGATTTATTTGTTGCTTCAATAATACCCGAATAATTGTGACCAT
GAGAAATGTTCATTGATCAAACATATATATCAAGTTAAATCTTAGATAAG
GAACTGTTACAGGTACAAGGGTGTGTGTATGACAGATCTCCAAACAGAAG
ACACTTCTTGCCATGGCTGAAGGCTTTGGAATGACATGCCCCCATCTTCA
AGCCCTTGTAACACATACAAATAAATGTAACCAACCATGGCCTCCTGACC
TTCTTCAGACCATGGTTGGGAGTTAGTTGTGAGTAGGTCTAAGGTTGGGA
GATGGTTGGCGAGGTTGCTTACCAGTCTTTACAAAACCATCTGCTCTAGC
CAACTACATATTTTTTATAAGTCATGTTCTGCTTGGATGCGATCAGAGGA
GTGAACTAAAATGATATTTCAGGCTACACAAAAAACAGCACTGAAGTGGT
TTGGGAGTGGTTAGGAGCAAAGTCTTGGGAATGTGTGACACTTTTTTCAT
GATTTAGAGTTAATAACTGATAGTTTGTTGCTGTAGCAGCAAATGTCCAA
CACAAAATGCAAGTCCTTACAACACAATATAAGACATGTAGTTACATTTG
TAGGTAACGTTATATCATATATATATATATGGAACGAATTATTCAATGAG
ATTGTGGAACTCATTAGACTTGATTTTAAAACAAAGACAACATATGTCAT
AGAATGTTTATGAGCTATACATATAGTTTCACTCATAGTCTAACAAACAT
CTTCACGAATAGCCTGTAAGCTGTGGAGTGGTTAAAGTAGTACAAAAAAT
GATCAAATAAAAAACAACATCTTATCAACACACTGTACTGTTTTATTAAA
AATGGC Coding sequence (CDS) from alignment at Sc0000003:8523004..8531409+ >Blg00948.1 ID=Blg00948.1|Name=Blg00948.1|organism=Branchiostoma lanceolatum|type=CDS|length=1581bp|location=Sequence derived from alignment at Sc0000003:8523004..8531409+ (Branchiostoma lanceolatum) ATGTCCTGGCTACAGAGAGTAGTCAGACAGCAGGGCCATACTTTATTCCG CGTCTGTGGCGCACGAAGTTTGACTGCTCTGAGAACGACCTACCGTCCAC AGAGCACCAAGACTGAAGACAGCGTTGCGAACATGACAACCGCCAGGCCG TTCGAAGAGATCCCTGGGCCGAAGGGTCTTCCCTTCATCGGGACGGCGTT GGAGTATACCCCGTTTGGTCGGTTTGCTGTCAAACCAAACTTCCGGGGCT CATTCAGGGAGAGAACGAAGACCTACGGGCGCATCTACCGGGAGAAGATC GGGCCGAGGGACTGGGTGGTCGTCAGCGATCCCAAAGAGATCGTGAAGGT GTTCCGCAATGAGGGGAGATTTCCGGAGCGCATTGAGCTGACGAGCATGA AAATTCTCCGGGAACAGAAGAAATGGCCGCTTGGATTAACAAACCTAAAC GGCGAAGAGTGGCAGCGTGTGCGCAGCTCGGTTCAGAAGGACCTGAATCG ACCCAAGACTGTTCGCGCGTACGCCTCAAGGCAGGATGACGTCACCAGGG ACTTGGTTGACGTCATCAGCGCTCTGATAGAGAAGGAAGGGAGCGGAGGT CAAATACACAACTTCATCAACTACGTGTACAGATGGGCACTAGAGTCGAT CAGCGTAGTTGTGCTGGACAAGCGTCTCGGTTGCCTGACCTTGGGTGACC TTGAACCGGGTTCCGATGCACAGCTGATGATCGACGGGGTCAAGGACTTC TTCAGGGCACTTGTCAAGCTGGAGCTGACAGGAGTCGGTCTGTACAAGTA CGTCAGCACGCCAACGTGGAGGAAGTTTGAGAGGGCAATCAACCAGTGGC AAGTTATTGCTGCCAAGTTACTGAAGGAAAAGCTGACTAAAAGTGAAAAT GAGGGAGGAGGGCCCGGTGATTCCGACACGGACTTCCTCTACAGCCTCCT GTCCAGGAAAGACGTCTCGTTCGAGGAGGCCATGATAATGGCCGTGGACT TGTTGGCTGCCGGGATCGACACGACAGGGAATACGTTGATGTTCAACCTC TTCTGCCTGGCGAAAAATCCGGAAGCTCAGGAGAAATTTTACCGAGAGAT AATGGAGGTGGTTCCACCAGGCCAGCCCATAGACGATAAGATGTTAAACA AGATGCACTACCTTCGTGCCGTGGTGAAGGAAACTTTCAGGCTTTATCCA ATTGCCCTCAACAGCCTGAGAATGCTGGATCGAGACATCGTGCTGTCGGG GTATGTCGTCCCTGCGAAGACCAAGATCTTAATGGCACATGACGTCATCA GCTCGCTTCCGGAATACTATCCGGAACCGGAGGTCTTCAAACCGGAAAGA TGGCTTCGTGATGACGCGTCCAGCAGTGTCCAACCGTTCAACTTACTGCC GTTCGGATACGGACCGAGGATGTGTCTCGGTCGGCGTTTAGCAGAGCAAG AACTGCATCTCGGATTGATCAGGATTGTGCAAAACTTCCACCTTGGATGG GCAGGAGAAGACATGAAGCAGGAGAACAGATTGACTCAAGCTCCGGACAG GGACAGTGTCGTCTTCTCTGAAAGAACTTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
Blg00948.1-exon-Sc0000003-1570713199:8523004..8523297 | Blg00948.1-exon-Sc0000003-1570713199:8523004..8523297 | Branchiostoma lanceolatum | exon |
Blg00948.1-exon-Sc0000003-1570713199:8524565..8524793 | Blg00948.1-exon-Sc0000003-1570713199:8524565..8524793 | Branchiostoma lanceolatum | exon |
Blg00948.1-exon-Sc0000003-1570713199:8525116..8525315 | Blg00948.1-exon-Sc0000003-1570713199:8525116..8525315 | Branchiostoma lanceolatum | exon |
Blg00948.1-exon-Sc0000003-1570713199:8525692..8525899 | Blg00948.1-exon-Sc0000003-1570713199:8525692..8525899 | Branchiostoma lanceolatum | exon |
Blg00948.1-exon-Sc0000003-1570713199:8526796..8526964 | Blg00948.1-exon-Sc0000003-1570713199:8526796..8526964 | Branchiostoma lanceolatum | exon |
Blg00948.1-exon-Sc0000003-1570713199:8527296..8527462 | Blg00948.1-exon-Sc0000003-1570713199:8527296..8527462 | Branchiostoma lanceolatum | exon |
Blg00948.1-exon-Sc0000003-1570713199:8528274..8528352 | Blg00948.1-exon-Sc0000003-1570713199:8528274..8528352 | Branchiostoma lanceolatum | exon |
Blg00948.1-exon-Sc0000003-1570713199:8529156..8529315 | Blg00948.1-exon-Sc0000003-1570713199:8529156..8529315 | Branchiostoma lanceolatum | exon |
Blg00948.1-exon-Sc0000003-1570713199:8529582..8529625 | Blg00948.1-exon-Sc0000003-1570713199:8529582..8529625 | Branchiostoma lanceolatum | exon |
Blg00948.1-exon-Sc0000003-1570713199:8530085..8531409 | Blg00948.1-exon-Sc0000003-1570713199:8530085..8531409 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
Sc0000003 | genome | Sc0000003:8523004..8531409 + |
Properties
Property Name | Value |
GeneID | Blg00948 |
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