Blg00948.1 (mRNA) - B. lanceolatum

Overview
NameBlg00948.1
Unique NameBlg00948.1
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000003:8523004..8531409+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg00948.1 ID=Blg00948.1|Name=Blg00948.1|organism=Branchiostoma lanceolatum|type=mRNA|length=8406bp|location=Sequence derived from alignment at Sc0000003:8523004..8531409+ (Branchiostoma lanceolatum)
AAAACGTTTAACTGCGGAGGCCAGCCTTACTCATTGAGACACCTGTTGAG TCTAAGATCTCAAACCGACTTCTGAAGATGTCCTGGCTACAGAGAGTAGT CAGACAGCAGGGCCATACTTTATTCCGCGTCTGTGGCGCACGAAGTTTGA CTGCTCTGAGAACGACCTACCGTCCACAGAGCACCAAGACTGAAGACAGC GTTGCGAACATGACAACCGCCAGGCCGTTCGAAGAGATCCCTGGGCCGAA GGGTCTTCCCTTCATCGGGACGGCGTTGGAGTATACCCCGTTTGGTGAGT ACAGACAAGATAGCCCCATGTAGGCCATATTTTACTAGTACCTTGTGGGA CAAGATACTGGTAGTATACAAAATGTAGGTGAAAACTCCCTTTTGAGACA CCTACTTTCGAGATTTCCCGGTTTTCCCAGTTTCTGTGAACCGTTTCAGC ACCTTCCTCAGTGACTTTCGGTTGCCAAGTATGTCATGCGTTGTATGGTG CGTTATATACTTCGCTTGTCTTAAAGTAGGGGACATGTAAAGGATACGAC GCCCTCTTGCTTACGTGGCAAGGGCAAATCAATTATATTGTTGACACACG GACAATGTCCTTGGTTGACATATGATGTGGGTCATGACGTCACAGTAACC GTTCAACCAGTGGAGCTGATCTCCAAGCAGATATTTGTCTCATTTACTTG TTACATTAAAGAAAAAAGAGGTTGTATTTGTCTGTGTGTGTGTGTGTATG TGTACGCGCGTGTGTATGTATGTGTGTATGTGTGTGTGTGTGTGTGTGTG TCTTTTTTTTGGCGAACAAGAAAACAACAAACAGACCAAAAACATTATAC CTCCCCGTGAATTTAATAGTAGCCTTTTCCACGATCCATTGACCCCACGA CCTGGGCTGTTTTGTCTGATTAATAACGATTTGTTCTAAAAGCTCTGAAC TATACTTCCTTTCACTTTTGCTGTCATCTTTACACTCATGTCCTGCTACT CAGTACTGACAATGTATTCAAATAGCAACGGAAAGACACTGACCCACCGT ACACAGTCCCTCCGTTTTCATGGAGGCAACGAAGAAAACCATCATTAGAT CTATACTTTTTCTTTAACAAGTTTGCTAAGTGAAAGGCCACCTGGACCGC CTCAGACTGGGCACTGAATTAACGCTTGATGAAGCAGCATCACTCCTAAG TCAGAAACATCTCTCCTAAGTCAGAAACATCTCTCCTAAGACAGAAACAT CTCTCCTAAGTCAGAAACATCTCTCCTAAGTCAGAAACATTTCTCCTATT TAAGTCAGAAACATTTCTCCTATTTAAGTCAGAAACATCTCTCCTAAGTC AGAAACAGCAAGTTTTACTAACTGACTCAATATGCGAAGCAGGGGTTACG AAGGCTGCTCGCGGGAAATTCCCTATTCCATTTTAGGCCAAAATGGTTTG ATCCACTCACACTCTGCCATTTATACGCCACACGACCCCACAACACTCTT AGTATTTTGTTTTCACATAAAACTCGGACCACCCATAGAAAGTTGTATAT TTCTCTCTCAGGTCGGTTTGCTGTCAAACCAAACTTCCGGGGCTCATTCA GGGAGAGAACGAAGACCTACGGGCGCATCTACCGGGAGAAGATCGGGCCG AGGGACTGGGTGGTCGTCAGCGATCCCAAAGAGATCGTGAAGGTGTTCCG CAATGAGGGGAGATTTCCGGAGCGCATTGAGCTGACGAGCATGAAAATTC TCCGGGAACAGAAGAAATGGCCGCTTGGATTAACAAACCTGTAAGTATTT ATTCACGAACGCGCGCACAAGTGGCACACACACGTGTGTGCATGTGTATG CGTGTGTGTGTGTGTGAGAGGAAGAGGGGGAGTGTGTGTGAGTGCGTGTC TGTATGTATGTGTGCGTGTGTCTGTGTGTGTGTGTGTGAATGAGGACACA TTTTTATCTGTTTTAATTAATCATCTAAAATAATGTTTTTCTCCAGTGAC ACCTGAGAAACAGGTCTTAGTAAGATAAGTAAATGAAACAAAATTTAGAT CCAGGCTTTGCAGAACTGAGGAAAACAAGATCAGACATTTTCTTTTCCAT TTTACATCTTAGAAACGGCGAAGAGTGGCAGCGTGTGCGCAGCTCGGTTC AGAAGGACCTGAATCGACCCAAGACTGTTCGCGCGTACGCCTCAAGGCAG GATGACGTCACCAGGGACTTGGTTGACGTCATCAGCGCTCTGATAGAGAA GGAAGGGAGCGGAGGTCAAATACACAACTTCATCAACTACGTGTACAGAT GGGCACTAGAGTGTGAGTATGAAACCCCACGCTTGAGAAACAATCGTTTT CAATGGAAGAGTCCTAGTTCACTATCTTGCACCGGGTCTGCAATTATGTG TATTGACTGTTTAAAGAATGAGCAAGGGTTTACTTCGAATTCACGACTTA ATCAACTCTTACATGATTGACTAAAGTTTTTCCCTTACATATAACATGTA CTAACATAATTCCACCGTATGCTACTACGTCCAAACAGATGTCCGGCCCA ACAAACCCAGTGAAATACACTCATGTATATCTGAACTGTGCATGCACTAG AGATCTCTCAAACCCTCTGTTTTTCAAAGTGGTGGATTTACGTAACCCGT CAGATTAATGTTAATGGAAGTAACATATTCCCACCCAGCGATCAGCGTAG TTGTGCTGGACAAGCGTCTCGGTTGCCTGACCTTGGGTGACCTTGAACCG GGTTCCGATGCACAGCTGATGATCGACGGGGTCAAGGACTTCTTCAGGGC ACTTGTCAAGCTGGAGCTGACAGGAGTCGGTCTGTACAAGTACGTCAGCA CGCCAACGTGGAGGAAGTTTGAGAGGGCAATCAACCAGTGGCAAGTGTAA GTATTGGTCTGTGGTCACTAATTCTCCAAGCACGGTCAGGGGGCTAGTTG TGGCCGGGATTTCTTTCGTCTGTTTTCTGGATATAACGAGGTGAGGGCGG AAGGGCTAATGTTAACACGGACTGTAATAACATAACAAGGATTTGTCAAT GATCCTATCATGCACGTGTTCGTTTCTCATGAACAGTATAGATGCATCTC TCATCCAAGTATGTTCTTCAGCTGAATGTGTTCAAACTTCATTCATCAAA GCCTGACCACTCTCTGGCACTATACCAATGGAGAGCGCGTTGTGTTAGGG CCCTTCCCGTTTGCCCTTCCACTTTTCAGGCATTTAAAAGCGTGGTGGCC AACACCTCTAAGCCAGAAAAATTGGTAACATCCTAATCCTGTTGATGTAG ATGCTCTAACATGGACCAATAATTGTCCAACTTAACTGAAAACTGTCTGT TACCATGGTGTTGGAAGCTGCTATGACCAACTTCCATAGTTACGGAAAAT CCTGATCTCCTATTGGACAAAGTATTTAAGAACAATGAGCCCCTGTACCT AAGATCTACCAAAGTGTGAAACTATTAGCTCTTTGATGTTTCTTTCACTG TCTTTTCCAATTGGTATAAGGTGCCATATACAATTTCTGCTGCAATCGTT TGGCCGATTCAGAGAATCATTAAGTGATTTTCGGTAGATTTTGTGTTTTT TTGTTTTGTTTCCTATGGCCTTCATAGATTGGGAAACACAAAAATGTCAT TCGTGATTTTTGTCCAGGAGCCTGATATACTAGTAGTGTAAATCTTTGTA CAGCAGCTCTCAATATGACAAGTTTATACAATAATGTAGAATATTTCTGA CATTACAACCTGCCCTTTGTTTCTTTGGATACCTAACTTTAGTATTGCTG CCAAGTTACTGAAGGAAAAGCTGACTAAAAGTGAAAATGAGGGAGGAGGG CCCGGTGATTCCGACACGGACTTCCTCTACAGCCTCCTGTCCAGGAAAGA CGTCTCGTTCGAGGAGGCCATGATAATGGCCGTGGACTTGTTGGCTGCCG GGATCGACACGGTATGTTTAACCTTGGTCACAGTTGCAAACAGGGTCCCC GTCGGGTAGCTTACGTGCTGCAACAAAAAAAGTTAGTGTATATCATGAAA TGTTTACAAATTATTCTCATGACTTTTTTTTACGTTTTTACGTTTTCTTC AACGACAGCTAAGAAATAGTCAAAATGACAAGTTTTGGTTGCCATTGATA GAAGGCTTTGTAGATTCTTGTTTTGTGATGAATTTGAGTTACGTCCTTTT TTTTTAGGACCAGAACTCATTGAACGCCCTTGTACTGCCATTTAAAAAAA TTAGTTGCTAGCGTAGTTCACATATTTATCTTTTTATTTCAGACAGGGAA TACGTTGATGTTCAACCTCTTCTGCCTGGCGAAAAATCCGGAAGCTCAGG AGAAATTTTACCGAGAGATAATGGAGGTGGTTCCACCAGGCCAGCCCATA GACGATAAGATGTTAAACAAGATGCACTACCTTCGTGCCGTGGTGAAGGA AACTTTCAGGTATGCATATAACACTAGTTCATCTAGATCCGCAGGGTAAC ATATATCCGGTATTTCTAAAAACAAAGTATTCATATGCTAGATGCAACAT CAGTGATACCGCCAGAAATGCAAACTTGACAGACTAACGTATTCAGTACG CTGTCTGAAAAACTTTGATAACCCTGCATGGGACGACGACGTCAAAAAAA TGTCTACCCCAGAATGGAACAGACTGTCCTCCTCATGGGAGGATTCGAAC TACGATATTCTTTTTTTTAAAGAAAAATGTGTCAAATGCCACGCCTACTC TTAAGTTATTTGTACATGTACAGAGGTAAGTGTGGTGGGTTCTGCGACTT ACTAAGTTGTGGAAAGGTAGCCGTAATAGAGGGTGCTTCATCTGTCGAAC CTCACTAAGCTGAGGACGCTGGCAGAAGGGGGTTTGGTTCATTTGTTTTA AGGTGGGCGTATTCACTATCTGTAGTTTGACTTCAGAAGTACATGCCAGC ATGTTTCTAACTACTGAGTGGGCAGAGACGCCACTCCTTTAATCTCCAAT CAGATCTATCGGTGGCAAGGCAGTATCAAAAGGGCCAATGGGTATCCAAA GCCACAGGAGATCTGCCATTTTTGAAAAGAAATGCTCCTCCCTGTTCGAG TCATGACAGATCTACGGTGGTTTTGAATACTCAATGGTACTTTTTATACT TCCTCGACACCGATAAATCTGCTTGGAGATTACCGCTCCATGGCCGCTAG TCTACCAGGTGATGGCAGGTGCCCGTGACATCTTTAAGTTCATTTTTCTC CTTTTAAAAAAATCTTTCAGGCTTTATCCAATTGCCCTCAACAGCCTGAG AATGCTGGATCGAGACATCGTGCTGTCGGGGTATGTCGTCCCTGCGAAGG TATGTCAGCTAGTTCGAGCATGTGGCAATAAACTACATTAATCATAGTAA CATTTAGAACATGCACACGTATTTCCAAGAGGGAAAAGTAATGAGTAGAA AGTATGTTAGATCAATATCTAGTCTAAGTTGTCGACTTAACTTCACAGTT TGGAAATCAGCTTTCCTCTTTTTATAGTTTTTTCGTATAGTCTTTACGCA ATTGTAAATACCTATTAAATCTTTTTTCATCAGCCACAAGAGGCATGGAT ATGCACTCATAATTGCATAATCATATAATATCAGCTAGCTGGAAACATTT GACGTTGTACATTTATGAAAGTTTGACACCAAGTTAACAGTTTAGTATCG TTTTCAAAAGTAATGTCCGCATTTTATGCCGTTGTAGATGTTGAATTGTT TAATTTGAAACAAGTAGATTCTGACCAAGACATTACATTCTCAATATGAA ATGTTGAAGTACCATACAATAGTATATGTATTGGTAAGTGAATGTTTCTG TACCTGAACGGTATTGTGACTCTACAATGAAAAAATACACTCAAAAACAC CTTTCTGTTGCTTCTTTCTATCGGTAGCCTTCTTCTGATCGAATGACCAA TAACTATGGGCATGTGACCCTATGGACGTCATCCATTGGTCAATGGTGAC AGAAATGAAGGGCATCGTCCCCCAAGTAATGTCTTTGCAAAAATTACTAA GAATTTTATGACATNATGTCTTTGCAAAAATTACTAAGAATTTCAAGACA TTCTAAACCAAAGATCATGTCCATCAATGATGTACGATGTACTTCTCTCC AGACCAAGATCTTAATGGCACATGACGTCATCAGCTCGCTTCCGGAATAC TATCCGGAACCGGAGGTCTTCAAACCGGAAAGATGGCTTCGTGATGACGC GTCCAGCAGTGTCCAACCGTTCAACTTACTGCCGTTCGGATACGGACCGA GGATGTGTCTCGGTTTGGATTTCTCCCGGCGTTTCTGGAATTTCGTTCTG GAATTTTGCTCTATAATTTTTTCTTGGAATTTTACTGAAATTTTTCCTGG AATTTTTTCCTGGAATTTTTTCCTTTTTTTTTCTGAATTATTTCTTAAAT CATTCCCAGGATTTTCCCTGGAATTCTGTTATGAAGTCTTGGCCAGTNTT CCCTGGAATTCTGTTATGAAGTCTTGGGCAGTTTTTACTGTCAACCTTTT AAAATGAATATCTTGATTCATTCATTAGGTCGGCGTTTAGCAGAGCAAGA ACTGCATCTCGGATTGATCAGGGTAGGTACCGTCGACTTTGAAGGGTTAA AGGTATGTCGTGTAACAAACGATAATCTTTGACCCTTGTTGCAGTTTTGA TACATCGGTATCATAGAGACCTCTTTTTATGATAAACTTGCATGTTCTAT ATAATACCTTATAATGGCATACACCATGGCATCTTAAGCAAAAATAGAAC GCTTATTTGGTCTTGTCCTTTCTTTTATGTCATCAATCTACCATGTTTGC ACTGTACTGTCACAAAACTAGTACCGTTTTAGTTTTGTCTTCTTCTTAAC CATCATCAATAATACTTTATCATATAGCATTCTATATGATAAAGAAGTCA AACTAGCCTAAGTAACAAATTTAGCTGATATTATGTTTTCATCTTGCAAT TGTATACCATCATTTCGCTTTGGTGGCAAGTATCCGTCAGGCATGAATTT GCAATAAAGATATTGTTATATTTCTATGTAGATTGTGCAAAACTTCCACC TTGGATGGGCAGGAGAAGACATGAAGCAGGAGAACAGATTGACTCAAGCT CCGGACAGGGACAGTGTCGTCTTCTCTGAAAGAACTTAAAGATAACTTTT ACTAAGCACTCCATTGAATTCCCTTTACTAATGAGAAGCCAGTTGAGGCA CGAAGAAGTGCTGAGGTCTTTTTAAGACTGTGGAATTAGTTCAACACGAT TTGGTACAACTTGGTCAAGACTCTGTACCGGAGGATTAGCCGTTTTAGGC TTTTGAACATTTATGAAGAGTGTAGTTCAGACAAGATTTCGTGTCAACCA CCCCCTGCTACCTAGCTGGGTGCTGCATTACAACGCGTAGTTGACACGAA ATCTAAACGATTTTGAGGTGTCTAGAGTATGTTATCCACAAAATCGAGTA AGTGTGGCCTAAGATGGAAAAAAAATGACAATCAGCCTGATGTACACTCA CACACTTGATTTATTTGTTGCTTCAATAATACCCGAATAATTGTGACCAT GAGAAATGTTCATTGATCAAACATATATATCAAGTTAAATCTTAGATAAG GAACTGTTACAGGTACAAGGGTGTGTGTATGACAGATCTCCAAACAGAAG ACACTTCTTGCCATGGCTGAAGGCTTTGGAATGACATGCCCCCATCTTCA AGCCCTTGTAACACATACAAATAAATGTAACCAACCATGGCCTCCTGACC TTCTTCAGACCATGGTTGGGAGTTAGTTGTGAGTAGGTCTAAGGTTGGGA GATGGTTGGCGAGGTTGCTTACCAGTCTTTACAAAACCATCTGCTCTAGC CAACTACATATTTTTTATAAGTCATGTTCTGCTTGGATGCGATCAGAGGA GTGAACTAAAATGATATTTCAGGCTACACAAAAAACAGCACTGAAGTGGT TTGGGAGTGGTTAGGAGCAAAGTCTTGGGAATGTGTGACACTTTTTTCAT GATTTAGAGTTAATAACTGATAGTTTGTTGCTGTAGCAGCAAATGTCCAA CACAAAATGCAAGTCCTTACAACACAATATAAGACATGTAGTTACATTTG TAGGTAACGTTATATCATATATATATATATGGAACGAATTATTCAATGAG ATTGTGGAACTCATTAGACTTGATTTTAAAACAAAGACAACATATGTCAT AGAATGTTTATGAGCTATACATATAGTTTCACTCATAGTCTAACAAACAT CTTCACGAATAGCCTGTAAGCTGTGGAGTGGTTAAAGTAGTACAAAAAAT GATCAAATAAAAAACAACATCTTATCAACACACTGTACTGTTTTATTAAA AATGGC

Coding sequence (CDS) from alignment at Sc0000003:8523004..8531409+

>Blg00948.1 ID=Blg00948.1|Name=Blg00948.1|organism=Branchiostoma lanceolatum|type=CDS|length=1581bp|location=Sequence derived from alignment at Sc0000003:8523004..8531409+ (Branchiostoma lanceolatum)
ATGTCCTGGCTACAGAGAGTAGTCAGACAGCAGGGCCATACTTTATTCCG
CGTCTGTGGCGCACGAAGTTTGACTGCTCTGAGAACGACCTACCGTCCAC
AGAGCACCAAGACTGAAGACAGCGTTGCGAACATGACAACCGCCAGGCCG
TTCGAAGAGATCCCTGGGCCGAAGGGTCTTCCCTTCATCGGGACGGCGTT
GGAGTATACCCCGTTTGGTCGGTTTGCTGTCAAACCAAACTTCCGGGGCT
CATTCAGGGAGAGAACGAAGACCTACGGGCGCATCTACCGGGAGAAGATC
GGGCCGAGGGACTGGGTGGTCGTCAGCGATCCCAAAGAGATCGTGAAGGT
GTTCCGCAATGAGGGGAGATTTCCGGAGCGCATTGAGCTGACGAGCATGA
AAATTCTCCGGGAACAGAAGAAATGGCCGCTTGGATTAACAAACCTAAAC
GGCGAAGAGTGGCAGCGTGTGCGCAGCTCGGTTCAGAAGGACCTGAATCG
ACCCAAGACTGTTCGCGCGTACGCCTCAAGGCAGGATGACGTCACCAGGG
ACTTGGTTGACGTCATCAGCGCTCTGATAGAGAAGGAAGGGAGCGGAGGT
CAAATACACAACTTCATCAACTACGTGTACAGATGGGCACTAGAGTCGAT
CAGCGTAGTTGTGCTGGACAAGCGTCTCGGTTGCCTGACCTTGGGTGACC
TTGAACCGGGTTCCGATGCACAGCTGATGATCGACGGGGTCAAGGACTTC
TTCAGGGCACTTGTCAAGCTGGAGCTGACAGGAGTCGGTCTGTACAAGTA
CGTCAGCACGCCAACGTGGAGGAAGTTTGAGAGGGCAATCAACCAGTGGC
AAGTTATTGCTGCCAAGTTACTGAAGGAAAAGCTGACTAAAAGTGAAAAT
GAGGGAGGAGGGCCCGGTGATTCCGACACGGACTTCCTCTACAGCCTCCT
GTCCAGGAAAGACGTCTCGTTCGAGGAGGCCATGATAATGGCCGTGGACT
TGTTGGCTGCCGGGATCGACACGACAGGGAATACGTTGATGTTCAACCTC
TTCTGCCTGGCGAAAAATCCGGAAGCTCAGGAGAAATTTTACCGAGAGAT
AATGGAGGTGGTTCCACCAGGCCAGCCCATAGACGATAAGATGTTAAACA
AGATGCACTACCTTCGTGCCGTGGTGAAGGAAACTTTCAGGCTTTATCCA
ATTGCCCTCAACAGCCTGAGAATGCTGGATCGAGACATCGTGCTGTCGGG
GTATGTCGTCCCTGCGAAGACCAAGATCTTAATGGCACATGACGTCATCA
GCTCGCTTCCGGAATACTATCCGGAACCGGAGGTCTTCAAACCGGAAAGA
TGGCTTCGTGATGACGCGTCCAGCAGTGTCCAACCGTTCAACTTACTGCC
GTTCGGATACGGACCGAGGATGTGTCTCGGTCGGCGTTTAGCAGAGCAAG
AACTGCATCTCGGATTGATCAGGATTGTGCAAAACTTCCACCTTGGATGG
GCAGGAGAAGACATGAAGCAGGAGAACAGATTGACTCAAGCTCCGGACAG
GGACAGTGTCGTCTTCTCTGAAAGAACTTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg00948.1Blg00948.1-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg00948.1-exon-Sc0000003-1570713199:8523004..8523297Blg00948.1-exon-Sc0000003-1570713199:8523004..8523297Branchiostoma lanceolatumexon
Blg00948.1-exon-Sc0000003-1570713199:8524565..8524793Blg00948.1-exon-Sc0000003-1570713199:8524565..8524793Branchiostoma lanceolatumexon
Blg00948.1-exon-Sc0000003-1570713199:8525116..8525315Blg00948.1-exon-Sc0000003-1570713199:8525116..8525315Branchiostoma lanceolatumexon
Blg00948.1-exon-Sc0000003-1570713199:8525692..8525899Blg00948.1-exon-Sc0000003-1570713199:8525692..8525899Branchiostoma lanceolatumexon
Blg00948.1-exon-Sc0000003-1570713199:8526796..8526964Blg00948.1-exon-Sc0000003-1570713199:8526796..8526964Branchiostoma lanceolatumexon
Blg00948.1-exon-Sc0000003-1570713199:8527296..8527462Blg00948.1-exon-Sc0000003-1570713199:8527296..8527462Branchiostoma lanceolatumexon
Blg00948.1-exon-Sc0000003-1570713199:8528274..8528352Blg00948.1-exon-Sc0000003-1570713199:8528274..8528352Branchiostoma lanceolatumexon
Blg00948.1-exon-Sc0000003-1570713199:8529156..8529315Blg00948.1-exon-Sc0000003-1570713199:8529156..8529315Branchiostoma lanceolatumexon
Blg00948.1-exon-Sc0000003-1570713199:8529582..8529625Blg00948.1-exon-Sc0000003-1570713199:8529582..8529625Branchiostoma lanceolatumexon
Blg00948.1-exon-Sc0000003-1570713199:8530085..8531409Blg00948.1-exon-Sc0000003-1570713199:8530085..8531409Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000003genomeSc0000003:8523004..8531409 +
Properties
Property NameValue
GeneIDBlg00948