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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000003:3207344..3216098+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg00890.4 ID=Blg00890.4|Name=Blg00890.4|organism=Branchiostoma lanceolatum|type=mRNA|length=8755bp|location=Sequence derived from alignment at Sc0000003:3207344..3216098+ (Branchiostoma lanceolatum)
TCTCCGTTCTAATCTGTTCGTGCAGGCGCGGTGTCTTCACAGCGCGGGGC
CGCTAAACGATGATGGCGGATCCTAACGAGACGATCATTCTTCCTGACAA
CGCGACGTGGGATTTGGACTCCTTCGTGACGTCTAACGTCACTCAGAGTA
CGCCAGGTATACCAGGTAAGTCAACCTTAATCTTTAAATGCCACAAACGT
TCCAATCTTGTTATTACTCTTGTTATTCTGTTAAGATGTATTTTCCTGCG
TGGCACGACCGGGAAAGTCCTTGTCATCTATCTCATCGCAAGGAACATTA
AGGGCTTCTTCAATAGATAGGTGTGAACAACGCTATTAATCTTAATCTTC
AAACGCCACGAAGGTTCCGAGGTTCCTATTGCCCTGGTTACTCTGTTAAC
AAGATTTGTTTTAACTGTGTTGCACGACCGGGAACGGCCTTGTCGACGTT
ATTAACAGGTATAGTGCGGAATCTTAAATAGATAGCTTTAAGCAACGCTA
TGGATCTTAATGTTCAAATGCCGCAAATGTTCCAAGCTTCTTGTTACTCT
TGTTATTCTGTTAACAAGATTTATTTTTCTGTGTTGCACGACCGGGAACG
TCCTTGTCATTAACGTTATTATCAGGTACAGTGCGGCATCTTCAATAGAT
AGCTTTGAACAACGTTATTGATCTTAATGTTCAGATGACAGAAACGTTCC
GAGGTTCTTAATCCTCTTGCTACTCCGTTAACAAGATTTATTTTTCCTGC
GTGGGTCTCACTTACACTTTATCATATTCATGGAGGGACGGCGCTGGTAG
CTAATTTTATTTGAAAGATAAAGCTTAAACAGCACAACGCTTGCAGCTAG
ATGTATCAAGTAAGGGGGAAATCATCATTTAGTGGTGAATTGTACGGCAA
TGACGAGACTGCGGTCCTATAGTCAATGACCGAAGGAACTTCACATCCCC
AAAATTCACCACTAAAAGGGTTGATTCAGAATCACGCAGCCATGGAATTC
ATTTATCCACGGTCTCACGAAAAACAGCATGGCTTTTGTCCTTCACAAAT
GACTAGTGAGTCGTGATGTAAGTATGGAAAGTTACAATGAACATACACTT
TTAGAAACGCACAAGTGTGAGACACTTGCATACACTTGGAGGAGCATTAG
ATGCCAATGATATACCCTGGATGCCCCTTCAAACAGCGGCAGCCCGCCAG
CATCCATCCAAGTGTTTAGTACCCTATCTATAGTGTCCACCTGTCCGCAA
TGTCCATTTTCCTCAAGTCCTTTGAGTGCTTACTATAGAAAGGTTCAGTT
GCACGTGTATGTTGTAAAGCCCCTGTCACGCAGCACGAAAATCGATCGGC
CGACGGGTCTGCAAGCTCTAAAGGGCATTTTTGGCAGTACTTCTCCCGAT
CATTGGGCAATGCCATTGCGTGATTGTTAGAGACCGGTCGATGTTCACAA
GTCTCCGAGCCTGTCCAGTGTGACTGGGTAGATTTTTAGGTGAAATGTAC
GCTCGACTCTTTGTTGATTTTCTAAACTTCGGCGACCTTCTTGCGATCTT
ACGATACGACCGAAGCTCGTGTACTCGGTGACACGAAGCTAACGACCTCG
TTTTATTGTGTTCTTCCCTTCAGTTCCGCCAGAGGTCGTTGTGATCCCTC
TCAAGTTAGATAGCTTTAAACAGCGCTTACAGTTAGATATATAGAGCTTA
GGTGTGATCAAGGAATACGATGATGATGATGATGATGATTATGATGATGA
TGAAGGAATAGTGTAGCAGGAGGCTAACAACCTCGTCTCATATTATGTTG
TTGTTCCCTTCAGAACCGCCAGAGGCCGTTGCTAGCCCGCTCCAGCTAGG
TGCAGAGGCATGGGCGGTGCCGCTCGTCTTCTCCATCATCACTCTGGTGG
GCGTGACCGGAAATGGTCTGGTCATCTACGTCATCACCAGGTACTGTAGG
AGCGTCATCATTAGATAGAGAGCTTTAAATTCCATTTGTCTTTTTAATGT
TGCAGTCTTAGTGTACGCGGCAAGATTATGATAGTTGACGTCAAGTAACA
CCTGCCTTTCGAATCAAGACCAAGTGGAAGAACATTGTTTAAAGACAATT
TAATCTCTACAACTGGGTAAGATATGAAAATTGCTTCAGGACGTTTCGAG
TGACATCCGTCAGTCTTATTCAGTGTCACTAGAACAAACGACTCAATCAA
TACTAGCAGATGAGATGCATCTGGAAAAAACGGCTGAACACGATAAAGTC
ACAAACTCTCAATCGTCGTAACTGACATGTAGATCTTGCATGATTGTTCC
TATGATGAGACAACACCATAGGAACTGCTGCTGTTCCTTGGGTTGTAAGG
CGGGTACCATGTACCGGAGACTTCTACGCGAAGTCCTCTATTCGGTGGAA
GAGCAGTTTTTCCCCTGTAAATGGATTGGGAAACATTTTATTTCTCCACT
CCCAGGTACGGTTAAATGATGCCAGTGACAAACTGCTGAAATTGGTATGG
TAACATTTTTTCAAGAAATAAACAAAATTTGAGATTTTCCATGTCTTGTT
GTTTTATTCTATTGGTAGGTACGGGCAGATGAAAACGGTGACGAACTTCT
ACCTTCTGAACCTGGCCGTGGTTGACCTCTCCTTCCTGCTGTGCTGCGTG
CCCTTCACCGCCATCATCTTCGCCACCAACGACTGGCTCTTCGGCAAGTT
CATGTGCAAGTTCGTCTTCTATTTCATGCAGGTACGGAGGGCAGCAATGC
ACTCTTCAAAAAATACCCAATGTAAATGTACTCTTCGAATTGACCCTACC
AATCTCGTGTGTAAAAGCTACCCCTATACCTAATTCCAGGTGATTTGGCT
TTCATATAATGACCCACAAACCCAAAATAAATTTTGGGGGGCAAAAATAG
CCAAACGTTTACAAAATCGCCTTAAAGGGGTGTATCCCCAAAAATATGAA
AAAAGACATGGACATATGACCAAGACGTCGTCGGTATTCTATGTTGTGGG
TATTCAGCATCTTCTTCTTAATCACAATGTTATGGTGGCTTGGAAAGCAA
TCAATCAATCAATAACTAAATCTCTTGATCAAACTTTATTGCACTATTGC
TGTAACGGGTACGTACGGTGTACTATAAGTTACTAAAACTATTCAACAGT
TGATAAACTCTAGCTAACAAATCAACAATTTCTTCACATTATACATCTCT
ATGGTCACGTTGTCTGTTTCCCCTTGACCCCAGGTGACGTTCACGGCCAC
GGGGCTGACTCTGGCGGCCCTTAGTCTTGACCGTTACTACGCCATCATCC
ACCCCATCGGCTCCATGTACTACCGGACCCCACGCACGGCTTTCCTCATC
AACACGGTGGTGTGGTTAGGTACGTCATTTAAGGGTTCATGACCCTAGAT
CGCTTCGCTCATTCGGTGGTTTATTCAGTGCTTACAGGCCACTCATGCCA
GGCACGACACTTGTAAGGGCAAGGGTCCTAATGTACCTAGCCTGACGAAT
CGCGCTCCTAGTGGCCAGCCGGCCTGTAACCGACATCCCCCGGTCAGTAA
CCTCCGGCCGAGAGCTTGTGTAAATACAGGCTATAATGTACCGGCCTGCG
ATCCGTTCTCCTAGCTCCGTTAGCGCTGGTCAGTCGTCAGCCAATCAGAT
GCCTCCCCTTGTGTTTTTGGAGGGAAGGTCACTAGTACCAGCCAATCACG
TTGTTTCTTGGCCGTAGACGGCGCCGTGATTGGTTTGTGACGGCTGGCAA
GCGCTAAGATTCCAAGAAGGGCGGGACGTAGGCCATAGGGAATAAATTGT
TGTCCAGTGTGGCCAGTGTCATGCCGTTTTGAATGATGAAACAGTTTTCT
AAATGTGCTGTGCGTTGCTTAGTACTGACCTTGGTGCTGAATCAATGCTC
TCCTCACGCCAAATCCTCTGTTGTGAGAGATACTGCCTTGAAAATTTGCG
GTTATGAAAGAAACATCCAATGTTAGTATTGCCTGCCTCTTTCTCTACAC
AGCGTCGTTTGTGCTGGCCTCTCCCGTGGCGGTGGCCTACCAGCAGTGGG
AGGGGAACTTTCAAGGACCGCGAACATACTGCACTGATGTAAGGAACCTT
TTGATTCTTGAATATAGTCTTGGATTTTATCATCGACCTTACGATTTATT
GCATTCAATTTGATAACGGTAACAATGTATTAAAAAAAACATGTTCTGAA
AGCCAAGATGTGTAATGTTTTTATTTTAATGTAAAAAAAAAAAAAAATTC
AGTTCGTATGATATTTAGAAAGTGGATTGCTGATTTTCTATCATTTAACT
CCGACTTTCAAACCAGACCTTTATAATACAAATGGTAAACACTGTGTATT
GTTTGGTTGTAAATTTGAAATGACTAGAATGTCTTTTGACGAAAATATGG
CTATATTATTTTCTTCAGCAATGGTCGAGCCAGTACTGGCGCAAGGCTTA
CTGGGTAATGATGGTGGTGCTGTGTTTCGTCATCCCCCTGGCGGTGTGCA
CTTTCACTAGTGCGCATGTCTTCCGCCAGCTGTGGAAGAAAACCAACATC
CAGCCTCTCGTGACGTCCAACCAGCATAGGGCACTGATGCGCAAACGCAA
GGTGGGTGCGCAGACCGTTTTACGGACCCCATTGCATGCTGGGAGACGCG
GGGCACTATGGGTAGTTCGGGGCACGCAACATCATGACCATGCCTACTAG
TACATGTATGTCCGGTCTGGTCTATGTTGTCATGGTAATGATGTTGCCAT
GCTGTGCTACCCATAGTGCCCTGCGTCTCCCAGCATGCATTGCTATCCAT
AGGAAGATATGATGTTTTGACACAAAATATTGCCCCCTTTGTAAAACGAT
CTTTCGTTCTATCATTTACGAAGGCCCACTACGACAACTTTTCGCCGCCT
ACCAAACCATTATGGAAATGAAATGGTTTGCGCAGATGACGGAATATGTC
CTTGTGGGCCTTCGTAAGTAGCTTGGGTGCCATCCTATCTAGTACATATA
ATACCGGAGCTCCCATACTCGCTATCTTTGCGGGAAAACTGGCGCCCAGG
ATACTTTGTAATATTCTCCAATCAGAGATTTCGGTCGGGGGTAACGTTAG
TAGTGGCAGCGATTTCTTACGGCTGGCTCCAGCCACCCACCCCCTCCCAC
CGAAACCTCTGCTTGGTATAACTTTATATACCAGTGCTCCCATGCTCGCC
CCCCTCTGCGGGGAAACCGGATAGAATGGGACCTAGTCTACTTTGTAAGC
ATTTCGTCGCCTTTTACATCCTGTTTACAACGCTCGACCGCGTATCCCTG
TGTTACCTCAGGTGTGTCGCATGGTGGTTGCCGTCGTCGTGATCTTCACC
ATCTGCTGGGCGCCGAACCACATCATCAACCTGTGGGTCCTGCTGGACGA
TAACTTCCCGGAAACATGGGTCATGTTCGGGGTCAAGGTAGTAGTAGTAG
TACGGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNAGTAGTAGTAGTAGTAGTAGCAGTAATAGTAGTAGTAGAAGCAG
CAGCAGCAGCAGCAGTAGTAGTAGTAGTAGTAGCAGTAATAGTAGTAGTA
GAAGCAGCAGCAGCAGCAGCAGTAGTAGTAGTAGTAGTAGTAGTAAAACC
ACATCATCAACCTGTGGGTCCTGCTGGACGACAACTTCCCGGAGACCTGG
GTCATGTTCGGGGTCAAGGTAAGTAGTAGTTGTAGCAGTAGCAGCAGCAG
TAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTA
GTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGT
AGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAG
TAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTA
GTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGT
AGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAG
TAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTA
GTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGT
AGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAG
TAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTA
GTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGT
AGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAG
TAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGAACCACATCATCAACCT
GTGGGTCCTGCTGGACGACAACTTCCCAGAGACCTGGGTCATGTTCGGGG
TCAAGGTAAAAGTAGTAGTAGTAGCAGTAGTAGTAGTAGTAGTAGTAGCA
GTAGTAAAACCACATCATCAACCTGTGGGTCCTGCTGGACGACAACTTCC
CGGAAACATGGGTCATGTTCGGGGTCAAGGTAAGTAGTAGTAGTAGTAGT
GGTAGTAAATGTTTTTGCGGCGGTGGTGTTGGTGGTAGTATGTAAGTAGT
AAGAAGTAGTAGTAGCAGTTAGTAGTAGATGTAGTAGTAGTTGCCGTTAG
TAGTATAACGTTATTAGTAGTAGTAGAAGTAGAGGCAGTAGTAGCGTTGG
TTGTAGTAGTGATGGTAGCAGTAGATGTCCCAGCGGTGGTATAGTACAGT
CGTCGTAGTACATGTGTAGTGGAGGTAGTAATAGTAGAGGTAGCAGTGGT
GGTAGTAGTAGTGGTAGTAGGAGGAGGAGTATACATACCACATGCATAAA
TGTCGAACATTGTATCATGTGTAAAACATTATATAAAGTACTGAATTTTG
TAAAACCTGATCGTGTTCAAGGTCGCTGCGCTGTGCCTCAGCTACGCCAA
CTCCTCCATCAACCCCATCATCTACGCCTTCTTGGGCGAGAATTTCCGCA
AGAGATTCAAGAAGGCGTTCCCCAAGGTGTTCCACTCCAACAGGATCATG
CCGCTGGGTAAGGGATGGCGTCACTTCGATACTCTGTAACCTTATTCAAT
TTCAGCCCATTAGCTAACATACACAATATTGTATGCAGCTTATCTTCTTG
GACATGAAACAATCTTTTTATTGGGAACGTATCTTCGTATCACTACAGTC
GCAGACGGAAGGCCGAATAGATGTTATGATATTGCAATATACATGTATGA
CTGTTAGCGATGAAAATTGCGTAATAGGTCAATGAATCAATCTTTAAAAT
AGGCGAATCTTGAAATAGAAATATTAAAGTCAACATGAAAGAAAAATATA
TAGACAATCGTGTTTTTCAAAGAGAAATATAGTCAGACTTATACATAGAA
TTGACATACAAACTGTATAAGATTGTCACAGCTACTTCCAATCAGGTCTA
TTACATACATATTATTTGTCTTGGTAGCAGATTGCATGTCATATGGCAAA
CTGTTGGATATGATATATAGATATGGAACTGTACATGGAATTACATATAG
TAGAAGTAGTGTAATGTAGTAAAATTAGTAGTAGTTGTGGCGGTACTAGA
GGTGGTAGAACAGATCTGAATTGTGTGCTCTGGTATTCATAGTGTGTCAT
CTACATGTATCTAACACCTTCGCTAATCTTTCTTTCCTTGAAATGGTTTA
TCCAATTTGGAGACTTTGGGTTAGATGCAGGGTCTAAGCTTTCCCAACTT
GGTCAGAATTTGTTCAGTTTACCAGAGTTTCTATTTGGCGTAAGAACAGA
TCTGGGTTGTATGGTCTGGTATATTCACAACGTGGGTTGCTATAGTAGAA
ACCGGGGTCAGAAGTAGGATTTGTTCTAGCTGTTCTACGAGTCTGAAGTG
CATAACCTTCCTTTAGTTTTTTTTTTCTTCATTTCTATCAATAGTACCCT
TGATTCGTTTTGGTGGAGCAGAATTTCTAAGATTGAAATGTAGTTTAGTG
CTTTCATGATAAATGGCGTCATGTCTGCAAAACGGTTGGGGTGTTTGACC
CAGAACCCAGAGGCCTTGAGTTCAAATCCCTTGACATGCCATTGATGGTG
TGCCCTAAGGAAATACTCTTCACACAACTTTCCCTACTCCACTCCGCTGT
AAAAATGGGTACCTGACTTCAGTTGGGAAGGTAAAGGTGGTAGTAGGATA
GGGATGGGCTCCACCTTCCAATATCGTGCCCTAGACGCAGTGGATAACAT
GTGCAGTGACACCTACGGCTTAAAAAAAAAGGCTATGGGTCTACCTTTAC
ATTTACCTTTTACTTTCATGATGCCTTCTTTCAGTCCGTCTTATCATGGC
CTACTGTTGCCGGAATTCGAAGTGAGTATTGACTGATGTGCCTCAGTAGT
GACCAGGCAAGCTCCCAGCCCCTTCAAAAGCAAACCTACCGGCTAAATAG
ATAGTTAGATAGCTTTTAGCTTTCAGCTTTTAACGTGGATTTTAAAAGTA
GATAACGCGCTTATTAAGTTAGAAACCCAGGCCGTCTTTGCATTAAAAAT
TACCC Coding sequence (CDS) from alignment at Sc0000003:3207344..3216098+ >Blg00890.4 ID=Blg00890.4|Name=Blg00890.4|organism=Branchiostoma lanceolatum|type=CDS|length=1095bp|location=Sequence derived from alignment at Sc0000003:3207344..3216098+ (Branchiostoma lanceolatum)
ATGATGGCGGATCCTAACGAGACGATCATTCTTCCTGACAACGCGACGTG
GGATTTGGACTCCTTCGTGACGTCTAACGTCACTCAGAGTACGCCAGGTA
TACCAGAACCGCCAGAGGCCGTTGCTAGCCCGCTCCAGCTAGGTGCAGAG
GCATGGGCGGTGCCGCTCGTCTTCTCCATCATCACTCTGGTGGGCGTGAC
CGGAAATGGTCTGGTCATCTACGTCATCACCAGGTACGGGCAGATGAAAA
CGGTGACGAACTTCTACCTTCTGAACCTGGCCGTGGTTGACCTCTCCTTC
CTGCTGTGCTGCGTGCCCTTCACCGCCATCATCTTCGCCACCAACGACTG
GCTCTTCGGCAAGTTCATGTGCAAGTTCGTCTTCTATTTCATGCAGGTGA
CGTTCACGGCCACGGGGCTGACTCTGGCGGCCCTTAGTCTTGACCGTTAC
TACGCCATCATCCACCCCATCGGCTCCATGTACTACCGGACCCCACGCAC
GGCTTTCCTCATCAACACGGTGGTGTGGTTAGCGTCGTTTGTGCTGGCCT
CTCCCGTGGCGGTGGCCTACCAGCAGTGGGAGGGGAACTTTCAAGGACCG
CGAACATACTGCACTGATCAATGGTCGAGCCAGTACTGGCGCAAGGCTTA
CTGGGTAATGATGGTGGTGCTGTGTTTCGTCATCCCCCTGGCGGTGTGCA
CTTTCACTAGTGCGCATGTCTTCCGCCAGCTGTGGAAGAAAACCAACATC
CAGCCTCTCGTGACGTCCAACCAGCATAGGGCACTGATGCGCAAACGCAA
GGTGTGTCGCATGGTGGTTGCCGTCGTCGTGATCTTCACCATCTGCTGGG
CGCCGAACCACATCATCAACCTGTGGGTCCTGCTGGACGATAACTTCCCG
GAAACATGGGTCATGTTCGGGGTCAAGGTCGCTGCGCTGTGCCTCAGCTA
CGCCAACTCCTCCATCAACCCCATCATCTACGCCTTCTTGGGCGAGAATT
TCCGCAAGAGATTCAAGAAGGCGTTCCCCAAGGTGTTCCACTCCAACAGG
ATCATGCCGCTGGGTAAGGGATGGCGTCACTTCGATACTCTGTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg00890.4-exon-Sc0000003-1570713199:3207344..3207508 | Blg00890.4-exon-Sc0000003-1570713199:3207344..3207508 | Branchiostoma lanceolatum | exon |
| Blg00890.4-exon-Sc0000003-1570713199:3209157..3209283 | Blg00890.4-exon-Sc0000003-1570713199:3209157..3209283 | Branchiostoma lanceolatum | exon |
| Blg00890.4-exon-Sc0000003-1570713199:3209912..3210074 | Blg00890.4-exon-Sc0000003-1570713199:3209912..3210074 | Branchiostoma lanceolatum | exon |
| Blg00890.4-exon-Sc0000003-1570713199:3210577..3210712 | Blg00890.4-exon-Sc0000003-1570713199:3210577..3210712 | Branchiostoma lanceolatum | exon |
| Blg00890.4-exon-Sc0000003-1570713199:3211346..3211431 | Blg00890.4-exon-Sc0000003-1570713199:3211346..3211431 | Branchiostoma lanceolatum | exon |
| Blg00890.4-exon-Sc0000003-1570713199:3211762..3211944 | Blg00890.4-exon-Sc0000003-1570713199:3211762..3211944 | Branchiostoma lanceolatum | exon |
| Blg00890.4-exon-Sc0000003-1570713199:3212655..3212780 | Blg00890.4-exon-Sc0000003-1570713199:3212655..3212780 | Branchiostoma lanceolatum | exon |
| Blg00890.4-exon-Sc0000003-1570713199:3214465..3216098 | Blg00890.4-exon-Sc0000003-1570713199:3214465..3216098 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000003 | genome | Sc0000003:3207344..3216098 + |
Properties
| Property Name | Value |
|---|
| GeneID | Blg00890 |
|
