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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000003:7351765..7357965- Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >Blg00878.0 ID=Blg00878.0|Name=Blg00878.0|organism=Branchiostoma lanceolatum|type=mRNA|length=6201bp|location=Sequence derived from alignment at Sc0000003:7351765..7357965- (Branchiostoma lanceolatum)
GCCACTTGCTACATGATGTAATCAAACACCACAGGTGTCTGCTACTGTGC
TACACAGACAGCCCTGATCCATTGAATCATTCAGCCAAGGATGTTTAAAA
TCGGACTATTGAACCTCCTTGAACAGCACATGCTATCTGCAGGAAATATT
TCAGTTGTCAGTTTAAAAGTTTCACTGTTGTATATGTTCCCAGGTCTGTA
GGGATTTCATTTGTTACAGGCAGCTGTTGAATTTTTCTGTGTTTTTTCTT
TCCAGGAGGGTTTTCGGCTCTGTTAGATTTCATGTATACAGGGAAGATAT
CTGTAGATGAGACTAACCTCACAGACTTCACTGGAGCACTACGAGCACTA
CAGGTACATTGGCATTTTTGGCTTGTCTGCCTTTCTATGTATAATATTGT
AGCTGTCGTTCTTATATGTTCTGCCAGGGGGAGCTGTGCAGTTGCCATAT
GTTCTACCAAAGGGAGTAAAGCCTGCTTGCCATGTTTCAATATGATTGTG
TTAATATGTGTGTTAAAAACCACATCAGAATTAGTTACATTTAGATACAA
TGCATACCTATTAAGTAAGGGCATGTGTATTTTGAATTTTTGTTCTATAA
AAAGGTTAAACTTTATCTGTAGAAGTTTGTAAACAAATCCTGTAACCTCG
GAATAAGATAAACTGATATGGACTTTGTACCCATGATATCTTGATGTTTA
ATCACCATAGATATTTGATTTTTGCGAGTCCTTATTTGAATCCTAGTTAG
CATGTAAATAAACAAACAAAAGGTGTTTTTGTAATGCCAGTATGTCATTA
TGTCACATGGTCTAGTAATAACTGAATACATGAATAACTCCTGGGGTATT
CATGTATAAATGTTTGCTGTTGTATTATCTATTTATAGGTCAGAAATGCT
GACGACATTTGCAAGAAGTTCGAGCCCTTTGCAGTTGCACTTGCCAATTC
ACAGGTATGTGTACTGTAAATTCATGTGTACTGTAAATTCATGTTAACTG
TAAATTCAGGGACTTGATTTTGCATTATGAGGCTCGGCTCAAATCCATCT
TTCGTAAGGGACTTAAAATGGGTTCCCATGTTTGAGAAGGTGCCACAATC
AAACCCCTCCCTGTAGAAATATACCCTGCTACAGAAACAGCAAGGAAACT
TGCATTGCTTATCTAACTATGTGCCACTTGGCCCTACAAGATGAACAACA
ACCCATATCTAGGGATGTGATTTCATTTCATTTACGTTGATGTTTCTCAC
CCCGATGTTCTTTACACAGTCTGAGTCTGCAGGTGAGCTGACAGAATGTT
TTAGTGGGGAATCAGGTCACGACGAGGCATTAACTGAAAGGTAAGAAATA
ATGTCATCAATTCATACTAGTATCATACTGAGTGATTTGATGTTAAGCCT
GGGAAAATTAACAGTGTTTCCAATGGCGTTATCGAAAAATATTAATATTT
GGGTCGGTTGGTAGGGATTCCCTTCTTAGAAAGTAGGTTTTGGTATTTAT
TTTCTCACTCATCTCAGGTGTAAATGTAAATGAGTATCAAGCTTTAATTA
GGATGTTAAATTAATGAAAGTCCCGTGTTTGAGGAGAGCCACACGACGAG
CATGTTTAAGAACCCACCACAAAAGGGGTCTTTCCTGGTGTGAGTGGATG
AAATCTGTCCGGATATGCAGCTTGTACTGTTAAGTAAAAAACCTGGTGTG
TTATGCGATGAGGTATGTAATTGAGGTGTTACCAACTTACCAGGTATAAC
TGTAAATGCAGAAATGTTTGCGGGGATTTAATTTTGCGGTAGGGAGAAAA
TGGAGTGTTCGCGGTGGTTTTGAGTTCGCGTTTGAAACAATAGTAGCACT
ACAGTCAAACAATGGAATGGCTTTTCTCGGTGGTTCTAAGTTCACGGTAA
AGAGTTCACTGCGAAAATCGCAAACAAAAACCACCGCGAACATTTCTGTA
TTTACAATATCAGGGCTCGAAATTCATCTTTGGGAATAGGTGCACTGGTG
CACCGGTGCACCCAACTCAAAAAATTGGGTGCACAGAAAGAATTTTGGGT
GCACCAGATAAAATAAAGTTGAATGTTCTTCTGAACATAATTACAAAGTT
TAACGCTGCTGCTTTTCTTAAGAACTTCAATCTGTAATTCTATAGCTAAC
TTTAAAATTTCAAACAAAATAAAGTACAGCAAAAAGTTATCATGCTGCTT
TTTATACTTACATTTCAAGAATATTCTGTATACTAGTGTACAATAGTACC
TTAACCCTATAGGCTACAAAAATATATAGGTGCACCAGTGCACCCACAGT
CAAAAATTAGGTGCACAGCTCCAATTTTGGGTGCACTGGGTGCACATGCA
CCCACTATTTCGAGCCCTGAATATGCAATGAGGTATTACTGGGTATGCAA
TAGAAACAAAGAAACAAGCATTTATACACAGTCTAACTATTTGCTCTGTT
AAAACCTGTTACAGAAAGCTGAGGTCACCCAGCCAGAAAAGATACACCTG
TGAACAGTGTAACACTGCCTTCAGTACACCCACCAACCACAAGAGACATA
TGCGCATCCATACTGGGGAGAAACCATACAAGTAAGTACTATAGTGCATA
TTTATGACATTTATTATTCATTAATTTCTTGTAAACCACTGGGAATTAAA
ACCCAAATATCTAATGGCATTACATGTACAGTATACTGTTGACTAAAAGG
AATACATATCAGACCCTTTGTCAGGTCATAAAGTTTTTCGAGTTATCTGA
GTTATCTGACTTCAATATGGAATGTGTAGGAAATATAGATTACTGATGCA
TACGGTAAAAGCATTTATGTTTGCTGTGCTTTTCTTTACGGAATGTTGGA
AAAAGAAGTTTTCAAAATTCTATTTACAGTACTAGTAATAAACATTGGAA
GGGTATATTTGTGATGTCGACAGTTCACCGTGAAAATGAAACCACTGCAA
AAGTTTCAAGGTCTACAGTATGTTACTGTTGCTTTTCAAATGAATGAACA
CTGAATAAATGTTGTACCTGTCTAGATGTGCCGAGCTGGACTGTAATGCA
GCCTTTAGTCAGTCCACCCACCTGAAGGAACACATGCGTATCCACCGGGG
GGAGAGACCCTACTCCTGCACGGTAAGGACACGGTTCACCTGGCTAACAC
TATGGCTGCTATAGGGATGCATCTCTAGATATTTCTCATTTGTTTCACAT
AACAGTGTTGTGATTATACGCTCTGTCTTGAATGTCGCATTGCTGAAGCA
TTGTTATTTTTGCCAATTGCACTCACGCAAGATTTAAAAAAAACGCTGCT
TTTTTAACTTTAAAATATGTTTAGATTTTACGCAATTGAATGATTTTGAT
ATCTTTGTAAGTTTGACACCAATTCAGTCAGTTGACTGCCATTGAGAGTT
TGTGTGAGCACTCAATAAACCATTCAACATCATCAACAATTGTTAACCAC
CTTTGGTATAACACACCAGTTATGGACAATAACATACTGCATTAGAAGGT
TGGAAAGAGAGAAATCGGCCTGTAGATGAATTACAGACACACTATCCTTA
CTTCACCTATAGGGTGAAGTAAGGAAGTAGAACTGTTTTTTTTTCTGTTT
CTGCAATTTTCAATGCATGCAACATAATGCAGCCTTGCCATACATGTACA
TCTTCTGTACTGCTAATTTTGTTTGTGGGGTTGGAAGTGTTGCAAAGCAG
TAAGGGTGAGGGGGTATATACTCTCCAAGCAGAGGTTGGTAGGGAAGATT
GGGACCTTTTTATCATATGCCCGGTTTTTAAATTAGTGCGAACAAAAACA
GGGCATGATTTCATGAAAAGGTTACAATCTTCCCCACCAACCTCTGCTTT
GAAATCAATCATCTCTACTAGTAATTACTTTGTTTTGAAATTGCTGTAAC
TCTCTTCTAATTTGCTTCGATAGTTTTGCGACAAGAAGTTTACCCAGTCC
ACCGGCCTGCGACGGCACATTCGCCTCCACACCGGTGAGAGACCTTACAT
CTGCACCGTCTGCCAGGAGACCTTCAACCGCCAGAGAACCCTGAAGATCC
ACATGAGCAACAAGCACGAGGGCAAGAAACTCTTCATGTGCAACATCTGC
CACAAGGGCTTCAACTACTCCGAGAGCCTCAAAGAACATCAAGTCATTCA
CGGAGGTTAGCAAGATTGCATTTTTTGTTACTGTTAATTTATAGACTATA
CAGTACTAGTGTTTGGTGGCATCAAATGGCCTGGTATAGATGACTCCAGA
TTGAGAGGCCACAGGCTCGATTCCCGGTGTCTTTCTGAATGGACGTAGTA
TGGAGGTCCCATGTTCAAGGAGGTGACTCAAGCATTTAAAGGGGAAGCTA
CTAAAAAGACTTGTTCTTATCCGTTACCCTTCCGCTTAAACCTTGTTGAA
AAGCGACCGTTTGGCCCGAACAAGCATTTCGAAAGAAAATAAAGGCCTTG
ACTTGCCTTGACTTGACTTTGACCCCTCCCTGTAAAAGTACATCTTGCTT
CTGAAACAGCAAAGAAAATTGCTGCCCTATGTGCCACTAGGCACTACAAG
GGTCTGAACAAACAAACAAGCATTTGTTTTTTTGTTAATCTTCAGGCAAT
CGTCCTTACAAATGTGACCACTGTGGTCTCGGCTTCAACAATAAGAAGAA
CATGGCCAAGCACATCAAGAAACTTCACGAGTGTTCTCCAGGGAACAGGA
CCTTAAAGTGCCCCGAGTGTGAGAGCTTCTTTGGAGACAAGTCACGGTAA
GTACTCTGAAGTACCTGACAGGTGCTTTTTTAAGAAATATGTAATTGTTT
TTAAAGGGAGTTCCATTATATAGCTTTTTGGTAATCCTGTGTTGTAGTGG
TTAGCGATACTGCTTTTGAACCAGAGAGTTGTGTGCAGAGTTTGAATCAC
AGTTTGTACATTTTGGTGCCAAAGAAAGAAATACAGTAAACAGTGTAATA
TCCTGCCTTGAACCTGTTTTCAGACTGACAGCTCACCTGAACAAAATCCA
CAATAAAGACATCAGGAGGCGACCACGCGACAAGAGAAACGACAGAGGGC
CCAAACAGGTGATCGTGGTGTCGCCCGAGCGGAGAACACACATCGTCACA
CGGTCGGTAAGCCACGCCGCGAGCAGCGACACATCTCAAACTCGCCAACA
AGAAATAATCGTTGTACAGGTAGGAACAATCAATCCTTACTCGTTTTGGA
ATGAAATGTACAATAGACAATTGGAAGTCACCGGTACATGAAAATCAATC
AGGTCACGCTGGGTGCATGTATGCAATTTTACTGTGCCCCAAATCTCATC
TTTACTGTTTGGGTACGCTAATGCTAATGCAACTAAATATTTGTGTACTA
GTAGGGTACTATTGTACGAATGTACACTAGTATACAGCATGTTTTTGAGA
TTCAGGTGTCTGAAAGAATGAAACCTTAGTTTGTTGTATTACTACTTTGA
AATTTTGAAGTTAAGCCCATTTCCTTGGAATTTTTTTCTTGCCCTGTCGC
TTCATATTTTTCCTGGAAAAAAGAGTTCTAATGCAGCATTAGTAATCCAA
GAGGTACATGTATGCACACTAAAACATCCAGGTGTTCAAGAGATTCTTGA
GAAGGCCTCAATAACACCATCTTTTAAATGTCATTATGGCAGACTTAGGG
TTCCCATGTGTCCTATCAAAAGACACAAATACTCCTTCATTCATTTATTT
ATCCTATTTATCATATATTCATCTATTCACTCTTTCTACCAGAAGGATGA
AGACGCGGCTGAAGACGAGCCAAGCTACGTCATCAAGGTTCTTGTCTCCG
GTGAGGACGACAGCGTCGGTCAGCCCGAAACGTTGGCGTGGAGCACCGAC
GAGCAGAACAAGGACGGTAACACGGAGGAAAGCGTTCAGAACGTTCAATC
AGGGAATGGTGACATCCCTAGTCAAACTGCTACGGCAGTGGTGGTAACAG
AAGCTAATGGAGTTGTACAGAGTGTTGTGGAAGATGGTGTAGGGAATAGT
TTACATTTGCAGGGTCAAGAACCACCGGCTGAAGCAGTAAGCCAGCCCGA
GGTGTTACAGAAAGGGACAGACAGTGGACAGACTGTGTGATATAGTTGAT
CTCATATACTGTGAATGCAGAAATGTTCGCGCTGTTTTATGTTCGCGGTT
TTCACAGTGTACGAGACTTTACTGCGAACTTAAACCCACTGCAGAAAGCT
A Coding sequence (CDS) from alignment at Sc0000003:7351765..7357965- >Blg00878.0 ID=Blg00878.0|Name=Blg00878.0|organism=Branchiostoma lanceolatum|type=CDS|length=1347bp|location=Sequence derived from alignment at Sc0000003:7351765..7357965- (Branchiostoma lanceolatum)
ATGTATACAGGGAAGATATCTGTAGATGAGACTAACCTCACAGACTTCAC
TGGAGCACTACGAGCACTACAGGTCAGAAATGCTGACGACATTTGCAAGA
AGTTCGAGCCCTTTGCAGTTGCACTTGCCAATTCACAGTCTGAGTCTGCA
GGTGAGCTGACAGAATGTTTTAGTGGGGAATCAGGTCACGACGAGGCATT
AACTGAAAGAAAGCTGAGGTCACCCAGCCAGAAAAGATACACCTGTGAAC
AGTGTAACACTGCCTTCAGTACACCCACCAACCACAAGAGACATATGCGC
ATCCATACTGGGGAGAAACCATACAAATGTGCCGAGCTGGACTGTAATGC
AGCCTTTAGTCAGTCCACCCACCTGAAGGAACACATGCGTATCCACCGGG
GGGAGAGACCCTACTCCTGCACGTTTTGCGACAAGAAGTTTACCCAGTCC
ACCGGCCTGCGACGGCACATTCGCCTCCACACCGGTGAGAGACCTTACAT
CTGCACCGTCTGCCAGGAGACCTTCAACCGCCAGAGAACCCTGAAGATCC
ACATGAGCAACAAGCACGAGGGCAAGAAACTCTTCATGTGCAACATCTGC
CACAAGGGCTTCAACTACTCCGAGAGCCTCAAAGAACATCAAGTCATTCA
CGGAGGCAATCGTCCTTACAAATGTGACCACTGTGGTCTCGGCTTCAACA
ATAAGAAGAACATGGCCAAGCACATCAAGAAACTTCACGAGTGTTCTCCA
GGGAACAGGACCTTAAAGTGCCCCGAGTGTGAGAGCTTCTTTGGAGACAA
GTCACGACTGACAGCTCACCTGAACAAAATCCACAATAAAGACATCAGGA
GGCGACCACGCGACAAGAGAAACGACAGAGGGCCCAAACAGGTGATCGTG
GTGTCGCCCGAGCGGAGAACACACATCGTCACACGGTCGGTAAGCCACGC
CGCGAGCAGCGACACATCTCAAACTCGCCAACAAGAAATAATCGTTGTAC
AGGATGAAGACGCGGCTGAAGACGAGCCAAGCTACGTCATCAAGGTTCTT
GTCTCCGGTGAGGACGACAGCGTCGGTCAGCCCGAAACGTTGGCGTGGAG
CACCGACGAGCAGAACAAGGACGGTAACACGGAGGAAAGCGTTCAGAACG
TTCAATCAGGGAATGGTGACATCCCTAGTCAAACTGCTACGGCAGTGGTG
GTAACAGAAGCTAATGGAGTTGTACAGAGTGTTGTGGAAGATGGTGTAGG
GAATAGTTTACATTTGCAGGGTCAAGAACCACCGGCTGAAGCAGTAAGCC
AGCCCGAGGTGTTACAGAAAGGGACAGACAGTGGACAGACTGTGTGA
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg00878.0-exon-Sc0000003-1570713199:7357613..7357965 | Blg00878.0-exon-Sc0000003-1570713199:7357613..7357965 | Branchiostoma lanceolatum | exon |
| Blg00878.0-exon-Sc0000003-1570713199:7357012..7357077 | Blg00878.0-exon-Sc0000003-1570713199:7357012..7357077 | Branchiostoma lanceolatum | exon |
| Blg00878.0-exon-Sc0000003-1570713199:7356626..7356696 | Blg00878.0-exon-Sc0000003-1570713199:7356626..7356696 | Branchiostoma lanceolatum | exon |
| Blg00878.0-exon-Sc0000003-1570713199:7355385..7355501 | Blg00878.0-exon-Sc0000003-1570713199:7355385..7355501 | Branchiostoma lanceolatum | exon |
| Blg00878.0-exon-Sc0000003-1570713199:7354844..7354940 | Blg00878.0-exon-Sc0000003-1570713199:7354844..7354940 | Branchiostoma lanceolatum | exon |
| Blg00878.0-exon-Sc0000003-1570713199:7353811..7354042 | Blg00878.0-exon-Sc0000003-1570713199:7353811..7354042 | Branchiostoma lanceolatum | exon |
| Blg00878.0-exon-Sc0000003-1570713199:7353220..7353370 | Blg00878.0-exon-Sc0000003-1570713199:7353220..7353370 | Branchiostoma lanceolatum | exon |
| Blg00878.0-exon-Sc0000003-1570713199:7352797..7352992 | Blg00878.0-exon-Sc0000003-1570713199:7352797..7352992 | Branchiostoma lanceolatum | exon |
| Blg00878.0-exon-Sc0000003-1570713199:7351765..7352220 | Blg00878.0-exon-Sc0000003-1570713199:7351765..7352220 | Branchiostoma lanceolatum | exon |
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000003 | genome | Sc0000003:7351765..7357965 - |
Properties
| Property Name | Value |
|---|
| GeneID | Blg00878 |
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