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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000003:506364..515032- Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg00843.5 ID=Blg00843.5|Name=Blg00843.5|organism=Branchiostoma lanceolatum|type=mRNA|length=8669bp|location=Sequence derived from alignment at Sc0000003:506364..515032- (Branchiostoma lanceolatum)
GTTTCTTAACTGCAGTTTCTTATCTCCCCTCCAGACGTCTCGAGCCATGT
CTGAGGTGCAGTCCGAGGAGAAGAAGGACCCCCCAGCGAGCGAGCCGGGC
GCCGTAAGCGGACACCACATCGTGCCGCCGCCCGGTCACCACGTGGCCAC
GCCCGCCGACCACCACGCCCCAGCCCACCACGGCTACACGCACGGCAACA
CCGACCACCATGGCATCATAGATCACCACGGCAACCTGGATCACCATGGC
AACATTGATCACCATGGCAACGGGCATGGGTCATCTGCGCCTGGGCACTT
CTTATATGGTCAGTATTTCCTTATATGGTCAGTATTTCCTTATATGGTCA
GTATTTCCTTATATGGTCAGTATTTCCTTATATGGTCAGTATTTCCTTAT
ATGGTCAGTATTTCCTTATATGGTCAGTATTTCCTTATATGGTCAGTATT
TCCTTATATGGTCAGTATTTCCTTATATGGTCAGTATTTCCTTATATGGT
CAGTATTTCCTTATATGGTCAGTATTTCCTTATATGGTCAGTATTTCCTT
ATATGGTCAGTATTTCCTTATATGGTCAGTATTTCCTTATATGGTCAGTA
TTTCCTTATATGGTCAGTATTTCCTTATATGGTCAGTATTTCCTTATATC
GTCAGTATTTCTCTCGTCCAAGAACAAAACAATTGGATGTGTTTCATCTT
TTGATCTTTTATGATAGAATGGCTAAAATGAAGCTAGAATGTTTTAATCA
CCTTCATTTAAGTAACTGAGTCTTGAGTGTGCCCCATAAACTTGAGAATT
ATCTTTAAAGGAAAGAAAAACTTGAAGAAAGATGTAAATTGGCAGAAAGT
TGTCAGAAAAATGATCAACTTATAAGTGATACACAAGACCACTACTAAGA
ATTGAGTGCATTTGATAGAAGTACACAGCTTGCCGTAGTAGGTAAGTATT
CCTGATGAGAAGACCATAGAAAGATTGTTTAAAATTCAGTGAATTTTTTC
CGTAGGTTCAGGCCAAAACATCCTGACAGACATCCCGGGACTGGGGGGAG
ACGAGGCCGAACCACAGAGGGAGGAAGAGCAACAGACACAACAGCCGGCA
GCAGCCTCTCCAGGGGAGGAGCAGCAGCAGGCGGAAGAGCCACTTGTGCG
CTCGCCACAAGAGACAGAGGAAAATGTAGGTGTCTGGAATTTACGGAGAC
TTTTATAATAGAAGTATTCACAGAAGAACCTCCCAAAGAATTCACGAATG
CTGTGTTCTTAATTGTTATAGGTAGCATTGTTTACAGAAGTGTTGTTTGT
GGTTTTGTTTGTTGCTAGGTAGCGGCGCAGACAGAGAGCGTGGTTCGTGA
CTTCCTGTTCCAGAGACACCAGCGCGAGCAGGCGCGGGAATCCCAGGTCG
GGGAGTGCACGCCCTCCATGCCCGAACTCACGCCCGACCTTAACCCACTC
AGGTAATTATAAGGACAGTAGCACTGGTTTCCACAGATAAAGTCACAATC
AGACCAGTTAGATGTACATGTTGTTTTGTATAAAATTATTCGAACTTGTG
GTTCTGGTTTAACCGTAAGTTTCACAGCATTATGTTATTCAGACAGCATT
TTTGTCTCTGTTTATGTTATGGTGTATAGTATAAAGTGAGTGGACTCATT
CCTCAATGGTGTGATGATTACACATTTTTACAGATATTCGACTTCAATAC
TTCATCAAACAAACCAAATTTGTTGTGTCTTTTGTGTTGTACTTTGCGTC
AATGCAATGGTTTTATTGGGAAAACTTCTTACAATAAGAATGTTCCATAA
CTAACAAGAAGCGATTTTCACAAAGCTGAAAAGCAACTTAGTTTACGTGT
GTAACATCCCATCATGCACCAAAAATAATTACTCAAGCAACTGGATAGAA
TTTTAAATTCGATCCAGTTGCTTGAGTAACTATTTTTGGCGTATCTTATT
ACCTTGATGTCTAACCTTCATCAACATGTCCCATCATGCCATGTGACATT
TCCCATCATGCCTTGTGACATGTCCTATCATGCCTTGTGACATGTCCCAT
CATGCCTTGCCCCCAGCCGCGAGAGCGAGGTCGGGCGGAAGCTGGCGATG
ATCGGGGACGAGATCGAGAACCGCTACGAGTCAGAGTTCAAGGCCATGAT
CAAGACGCTGCGGGTCACCCCGTCTACGGCGTACGAAGCCTTCGCTGGCG
TCGCTCGAAGGTCAGTGGAGGTCGCATGCCTCGTGGTTGCCATGGTTGCT
TTCGAATTTTACTGCTGTTTTGTTGATACAGTCAAACATGCCTAAGGTCA
GTGGAGGTCACATACATTGTGGTTGCCATGGTTACTTCAGAATTTAACTG
CTGTTTTGTTGATACAGTCAAACCTGCCTAAGAAGACCACTTGGGACTGA
TAAAATCTGACAGGTGGTCACTATAGACAGGATTCTTTATGCTTATGTCA
CGAGAAAATTATCTAAGGAGGTTATTCTGTGACGAGATAAACTGGGGCAG
AATAGCGGCGCTTCTATGCTTGTTTTATTAGTGTAAGGCGTCCAGAAGAC
GCCCTGATGCCTTGCTGGCTAATACCTCCCCCTTTTGCAGATTGATTGAT
TGATTGATTGACAGGTTATTCCGTGACGGCATCAACTGGGGCAGAATAGC
GGCGCTGCTGTGCTTCGGGTACCGCATGGCGGTGGACGTGCTCGAGCGGG
GGATCCCGGACTTCGTGCGGCAGATCATCAAGTACGTCGTGCAGTTCATC
ATCTCCGAGCGGATAGCCAGGTGGATCGCTGAGCACGGCGGATGGGTGAG
TCTACACCCCTGTTTGTGTAATGGGCTCTTCCAAATTCTGTCAGAGTTGT
CTGATTTTGGGCTATACCACTTGATGTTTAGGACACAAAAGAGTGATTTA
TCGTATAGCCAGGTGGATCGCAGAGCACGGCGGATCTGAGTTTGAGTTTG
AGTTTATTTAGAAAATCCACTAGTGATGTGCCCAAAGGCACACCCCTAGT
CTTCCTGGACTTCTAACTTGACATCACAATAAATACAGTAGACATAGCAG
TGCATACCATGGCAATGACAACATAATGAACAGCATGACAATGTAACGTA
TGTTCAATAATTACAGGAGTCTACACCCCTTTTGAGATGATGGACTATTC
GGAGTTCTGTCAGAATTCTGTCAGAGTTGTCTGATTTTAGACTAATCCAC
TTGATACTCAGGGGTGTTGATATACATAGTTGTTAATTTTACCTTGTATG
AATATTTTAGGGTCATAGATTGTAAGAAGACCGTAGCACATTCTCAATAA
GGATTGCTATCTGCTAATTAAACGTCATGTGTTAACAGATTTTGTAAGTT
TTGAGGACATTTCTCACCATGTTATTTTGTGTCCCCCCCCCCCCCCCCCC
CCCCCCCCCCCCCCCCCACCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
CNGGTGAGTCTAAAGCGCACCCCTGTTCTGATAATGGACTCTTCCGAGTT
CTGTCAGAATTCTGTCAGAGTTGTCTCATTTTAGACTAATCCACTTGATA
CTCAGGGGTATTAAAATACATAGATTTTTAATTTTACCTCCTATGAATAC
TTAAGAGTCGTGGATTTTAAGAAGACCGTAGCACATTCTCAATAAGGATT
ACTATCTGCTAATTAAACGTCATGTGTTAACAGGATTTGAAAGTTTTGAG
GAAATTTCTCACCGTTTTATTTTATGTCTCCCCCCCAGAGAGGCGTCCTG
AGCTACACGCTAAACGAGGGGTTCCAGGCGCTGGGCACAGTCTTCGTGGT
CGCTGCAGTTACCGTCATCGCCGCCGTGTGGCTCTTCAGACGGTCATAGA
ACCACCAGCAGGTGCCCCTCCCCGTGCCAGGAATGGTTCAGTCTGAAATT
TGATCAGACTGGTCATTCTTCCGATGGTACCACTTCAGTTGTAGGGATGT
CAGGATAGATACATGTATTCCCTGTACCATATTGATCGATTCGTAATTCA
CCCCAAAACTGAAGTGGTAGGTTCCACGTTTAGGTGGGCGTTGTGAGGTT
TGGATGATACCATTGGGTGAAGGAGGGGACAAAGCTGCTGGTATTTTATG
GACCAAGTTTCTGGGTTGTGCTATTGTGGAGGGAGGGGTGTCCTGATAGT
GCTGGGAGTGGAAGACTCTGCAGAGCTGTCAGCTGAGGGTTCAGCAGAAA
AACAGTCAAACCTGCCCAAGAAGACCACCACAGTCAAACCTGCCTAAGAA
GACCACTCAGGGGACCGATAAAATCTGCTCTATGTGGACAGGTGGTCACA
ATTCTTAATGCTTGTGTCAATGGAAAAATTATTTGAGGATCCACCAAAAA
CTGGTCACCATGGCCAGACAGTCCCTTTGTATAAGTGGTCTCTTTTAGTT
TGACTGTTTAATTCTGACCCAAAGTTGGAAGGTTTCTATTTTTGGAAAGT
ATTCCAGGCTATTTTAATGGCTATTGTAAATGTTTTCATTGTTAAAATGT
ATTAAAGTTGATTGGCCCTGAGGAGCAGGTTTGAATCACTTTGCGACTGG
AAAGTTTATGAAATAGTTTTCTCTGCAAACTTCAGTTGACAGCCCTGCAT
TGTACATATAATGAGCCATTTTTCAGTGTCTCGTTTGGACTAGGTGACCT
GTGCCCTCTAAAACTGACCTATGACCTCTAAAACTGACCTATGACCTGAC
CCTTGACTTGCCGCACTTGACTCATGACAAGTCAGGCAAGGCTGAAGATG
GCAAGCAATTCATTTGAAAAATTTACTTGTCATTATAAAGTCACAAGATT
TTTGCCTTTGGAGCTTTGATGTGTGAAGGGTCAAAGGTCATCTGTGTCCA
ATCAGAGGCTGAGAAGAGTTTGATTGACAGGAAGGGAGTTTACAAGGAAC
AGGGTGTTGGAGAGAAACAGTAAATAACGTAACTGTCAAGTTTTAGGAAA
AATGACAAAAGATTTTAGGCTAGAGGCTCCGAGAGTTGTATTAATATGGG
CCATCCCTTTTGAGAAATGGTTGTGCCCAGAACCTGTATGATTGTAACGG
GGAATGACCCAATGCATAAGTGAAATGGGGGTGGTCAGGATGTTTATAGG
AATACGTTCCACCCAGGTTTTGATCGTTCTGAAGATTCTAGGACGCGACA
AGAGGCTGAGAAACATCATATCATAAGACAAGTATTTTCCTATTTCTACA
TGTACAAGTCAGTCTGGGTTGGGAGGGAAACAAGATGTCCAAGTCTTCTT
CAAGGTCATTCATGCTGTGATTGAAGGTCAAAGGAAGACAAGGTCACACA
CTGTTGATGAAGGTCGTAAGAGTTATGAACTTTGATATATTTCTGGTGAG
AATCTACAGCAGAATATTCTTACTTGTTCCTGTGTGCTTGAAAAGTGATG
TGAATTTCTGGCAAAATTTTTTCAAAATTCTGATAAAAAAATCAAACTCT
GACCTCAAACCGATTCTGTTCATATCATTACTGTCTGAAAAGGCTGTAAA
TTTGCTCTGCCTGCAAATTCCAGGATTGATGGAATTTCTGTCAGGAAAAC
TCAGGAAAGCTGCCGTTGATAAATGATGAATTGTGCTTATCATCGATAAT
ATCAGCTACGTAAATGGCCGCTTCTTTCTGCTGTCAAAAGGTACTATTTA
GCTGTGGCGATGTTAATTCGACCTTGACTCGCTGTGATGATGTTGATTCA
ACCTTGACTCCGATCTTGCTGTGGTGATGTCCGTACGACTCACTGTGGCG
TTATTGATACGACCTTGACTTGCTGTGGTGTTGTTGATACGACCTTGACT
TGCTGTGGTTTGTAATAAGCATTCAGGTTCAAGGTCCGGAGTTTCAGGGC
AGTCGAGGCGGAACTCAATGGGACTGGATCAGAATAAACTTCAGGATCAG
TTTGTGTGGAGAGCAATAATCATCGACACTCACCTAAAATCAACCTAATT
CAGGGATCAAAACATTAATTTTACTACACAAAATGATGATGGGATACCTT
TGAAATAGCTGTTTTAAAGGCAACAAATAAAAAAGTAGTTGTTGAAAACA
ACGATCAAAATCTCCCAGTCCAGACTGACTCCAGCTGGCCTATTTGTGAG
TAGTTGAAGTTTAGAGAGAATATTTGTGATATTTCTGTGGATGTTTTGTT
CGTTGTTTCATGTGACTTTTGTGGAGAAGAAAGAAGACAAGACAGTTAAG
TGCCGTAAACGTATCGTTTCCTCGTCTGCCATAATTGTAAAGATGTCTTT
TTATTCTGTTTTAAGCTGTTTTATCATGTGACGGGAGGGTATGTATGGGG
TTTTGCAGCATGCAGGTGTCATGGAGTATTGCGAACTAAGAGAGGCAAAG
TTATGTCAACATTCATAATAGAGGTATTGTTTTGTGACCAAATTTACAAG
TTTCAGGTAATTTTTCAACAGAAAACTTAAGTTTCTCGACAATCATGTTC
TCTTTTGAAGGCCAAAAGTTGTGCTTTTTTTCCTTGCGAGATGTGATGTG
GTATTCAACTCATGTGACCATGTGTGACCAATCAAATTGCTGCAACATTA
CTGGCTTTACAAGCTGAAGTTCTGACTCTGTCTGCTAGGGGGAGCTTGTG
TNCTGGCTTTACAAGCTGAAGTTCTGACTCTGTCTGCTAGGTGGAGCTTG
TGTCTAACCAAGCAGTGCATGTCCCATATTGTACAATTTCACCAGGAAAA
GGAGGGAGTTTTAGAATAGGTGCCTTTCCGACGCTTGCTGCTTCTGGCTG
TTGCTTAGTGCCTTTTGGAAATAACTTTTGTCTTAAGTAATGTTAGGGTG
CTCTCTGTCAGCTTGCTACTCTCCCTAAGGTACTCCCTGCAGCAGAAAGC
ACAAGATACTGTAACATTAAATGCAGAAATGTTCGCAGTGGTTTTATGTT
TGTGGTTTTCTCGGTGAAGTCTTAACCGAGAACTTCAAAACCACTTCAAA
ACCACCGCGAAAAGCGCTAGCGGTACTACTTAGCCTGACGAATGGCGCTC
CTAGTGGCCAGCCGGTCCTGTGACCGCCATCCCCCTAGAGGGGTCAGTAA
CCTCCTGCCGAGAGCTTGTGCAAATACAGGGTACGGTACTACTGTTTCAA
ACGCAAACTCAAAACCACCGGGAACACTCCATTTTCTCCCTACCGCGAAA
TTATATCCCCGCAAACATCTGCATTTACAGTATCCCAAACTTCCTCTAAC
CTTCCTTGACCCTTATGTTCTATCCACTGCCTGAGACATGAAGGCCCCTC
TGAGGTGGCTGCTTCGGCAAAAGACAGTGCCTGTTGTCTGTGTTGACAAA
AATGCAAACTTGCGTGTCATGTTACTACTGTATGATCACCATTGTAACTG
AAAAGAACTGTGGCATAGCTACTAATGCAGGCATTGCTAACTGTCTTCTT
TGGCCACATGCTGGAATTGTTTTGCCAGTTTCCCAGCAAGGTTGCTGCCA
ATGTCATATTTGATGTTTGTCAATAGTTTTCCACGTAACTCTGTTTGCTA
GAGCGCTGAAACAAATATTTGTAGTTTGCTGGATGTAACGTTATGTCTGC
AATGTGATTATTTATTTCATTCAGAGATTCTGTTTATGATATTTGAGCAC
GGTGGTTGGCCAGTTCTTTCAAAGTCTTTTCTGTAAGGCACTCGCGCCAT
GTAACAGTTAACGTCTTAAGACTTGTATCCATCACATTTCTTGTCTTGTT
TCTTGTTCGGATATTTTCCTCCTTTGTTGTTCTAAAGACTAAAAATTATC
ACTAAGATAAGAATCCTCTTTGTTTATGATAATGTGACCAAGATGTGTTT
TAGACTCATACTTTTATTATAACATGGGGGTCTTAGGCTACCGAGTGGTA
TTACGAGAGTTGACATCGCTACATGTTGATAACTTTTTGAAAACTATGTC
TTCAGGTACAGAAATGTGTAGGGAAGAACAAGGTGGAACAATTAGTAGAA
CTGGCTCAGAGCCAATGTCACAGGATTGGTATTGGGAGTGGTTGCAACAT
CTGTTTATCATTGTCATATTTCTTACTGAGAGTTCAAACATTCACAAAGT
TACATGGTTAAAACATGCTACAGGAAGAAGCTACATGTAATGTTATATCT
GCCAGGACCAAACCAAGATGGGAGATTTGAGGATCATATGATGATGATTA
TCTGTGATATTGTCAATGCTGAAGGACTGGGGCCATTTTGTAAAGTTCAC
CAAATCTAAATTTTTTTAGTTTATATTAAGCTTTACGTGTTGAAATTTCA
GGTGAAAATCTTCTTTGTAAAAAAGTACTGAAAACTTTTACTGTTACTTG
ACCTTTGCTTGCACTTGACCTTCTGAACTTTCCAATATGGTGGCCACCTG
TTAGGTACCCAGCATGCTTTGTGAATCCAACATGGCTGCTAACAAGTTGA
GGGAGTGGTCGGATGTTTCCATGACGATGGAAGAATAGAACAGTGAGTAA
AGAATCAGCGTTTTTGGTATTTAGATACCCAAGGAAACTTAATATGACTA
TTATTGATAATTTTCTGTGAAATTTACGTTAGATTATGTACTGCTTGATG
CAGGTTAATTATGAAATGTTCTGTGTACTTTGTTATTATAGAGAAGTCTT
ATTTGAGTAAATTTGACGTCATCGATGTATTTGAATAGGTCAGAATAAAT
ACAGCTGGAAAACCCAAGT Coding sequence (CDS) from alignment at Sc0000003:506364..515032- >Blg00843.5 ID=Blg00843.5|Name=Blg00843.5|organism=Branchiostoma lanceolatum|type=CDS|length=1002bp|location=Sequence derived from alignment at Sc0000003:506364..515032- (Branchiostoma lanceolatum)
ATGTCTGAGGTGCAGTCCGAGGAGAAGAAGGACCCCCCAGCGAGCGAGCC
GGGCGCCGTAAGCGGACACCACATCGTGCCGCCGCCCGGTCACCACGTGG
CCACGCCCGCCGACCACCACGCCCCAGCCCACCACGGCTACACGCACGGC
AACACCGACCACCATGGCATCATAGATCACCACGGCAACCTGGATCACCA
TGGCAACATTGATCACCATGGCAACGGGCATGGGTCATCTGCGCCTGGGC
ACTTCTTATATGGTTCAGGCCAAAACATCCTGACAGACATCCCGGGACTG
GGGGGAGACGAGGCCGAACCACAGAGGGAGGAAGAGCAACAGACACAACA
GCCGGCAGCAGCCTCTCCAGGGGAGGAGCAGCAGCAGGCGGAAGAGCCAC
TTGTGCGCTCGCCACAAGAGACAGAGGAAAATGTAGCGGCGCAGACAGAG
AGCGTGGTTCGTGACTTCCTGTTCCAGAGACACCAGCGCGAGCAGGCGCG
GGAATCCCAGGTCGGGGAGTGCACGCCCTCCATGCCCGAACTCACGCCCG
ACCTTAACCCACTCAGCCGCGAGAGCGAGGTCGGGCGGAAGCTGGCGATG
ATCGGGGACGAGATCGAGAACCGCTACGAGTCAGAGTTCAAGGCCATGAT
CAAGACGCTGCGGGTCACCCCGTCTACGGCGTACGAAGCCTTCGCTGGCG
TCGCTCGAAGGTTATTCCGTGACGGCATCAACTGGGGCAGAATAGCGGCG
CTGCTGTGCTTCGGGTACCGCATGGCGGTGGACGTGCTCGAGCGGGGGAT
CCCGGACTTCGTGCGGCAGATCATCAAGTACGTCGTGCAGTTCATCATCT
CCGAGCGGATAGCCAGGTGGATCGCTGAGCACGGCGGATGGAGAGGCGTC
CTGAGCTACACGCTAAACGAGGGGTTCCAGGCGCTGGGCACAGTCTTCGT
GGTCGCTGCAGTTACCGTCATCGCCGCCGTGTGGCTCTTCAGACGGTCAT
AG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg00843.5-exon-Sc0000003-1570713199:514725..515032 | Blg00843.5-exon-Sc0000003-1570713199:514725..515032 | Branchiostoma lanceolatum | exon |
| Blg00843.5-exon-Sc0000003-1570713199:513858..514027 | Blg00843.5-exon-Sc0000003-1570713199:513858..514027 | Branchiostoma lanceolatum | exon |
| Blg00843.5-exon-Sc0000003-1570713199:513581..513714 | Blg00843.5-exon-Sc0000003-1570713199:513581..513714 | Branchiostoma lanceolatum | exon |
| Blg00843.5-exon-Sc0000003-1570713199:512823..512966 | Blg00843.5-exon-Sc0000003-1570713199:512823..512966 | Branchiostoma lanceolatum | exon |
| Blg00843.5-exon-Sc0000003-1570713199:512238..512418 | Blg00843.5-exon-Sc0000003-1570713199:512238..512418 | Branchiostoma lanceolatum | exon |
| Blg00843.5-exon-Sc0000003-1570713199:508471..511294 | Blg00843.5-exon-Sc0000003-1570713199:508471..511294 | Branchiostoma lanceolatum | exon |
| Blg00843.5-exon-Sc0000003-1570713199:506364..508386 | Blg00843.5-exon-Sc0000003-1570713199:506364..508386 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000003 | genome | Sc0000003:506364..515032 - |
Properties
| Property Name | Value |
|---|
| GeneID | Blg00843 |
|
