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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000003:5515359..5519689+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg00842.0 ID=Blg00842.0|Name=Blg00842.0|organism=Branchiostoma lanceolatum|type=mRNA|length=4331bp|location=Sequence derived from alignment at Sc0000003:5515359..5519689+ (Branchiostoma lanceolatum)
ATGGCGGCACATGTAAACAATCATTCGTCCGTTACATCGTTGCTCAGCTG
GTAAATATCATATTTTCTGTCTTCATAACTAGTGACATCTGAATTCTTGC
GGATCAGGACATGTCTAATATACTTTTTGAACCGTTGTCGTGCTGTTTTT
GTAGATATGTTTGTGTAATTAAGCAAACGCGCCCTTTAGAAAACCGTTGC
TGTATAAACGTCAACTAATTTGATTTGATCAGTTTACTAAGACACTTAGC
TTATTTTTTCTCCGTCTTCATCTTCTCAATCAAAAAATTCCAAATACAAT
ATAAAACAACTGCTTACTTTTTCAATGACTTTGACACTTTGGTAGTCGTG
GAATCTCTCTTCTGTGGGGTGTCTTTACAGCAGCGGTTTTAATAATAAAT
TATTATGGAATTCGTTTGTTTTTAATGTTTATGTTTGAATCCATGGATTC
CCGCCCACTCAAAGTTTAGATTTACATTGATTCAACTTTTCTAATGGTTC
CTTCCTGTAGGGCAGTCCATGACTTGTGTCTCCGAGCAAAACTATTGTTT
TATTGTGATGTTAGCAATCACATTTAGCATCCAAATTAGCTTTAGACTTT
CTTAACCGTAAACGTAATATTACTGTCAGTCAGTCTTCACAGACTAGGAC
AACTGTTGGGAAACAGATGAAAATACAAAACAAGAATTGCAACAAAAGTT
GAAAATATTCAGAGAAATGATTGAGAGTTCAAAGAGAACATATTTACCAT
ATTAGCTGTACTATAACCTGACGTCCAACTATATGTAAAAGAAATTTAAG
AAAAGCATCACTCAAACCAGAAACAGAAAAAGTCTGTAGATGTGGGATTG
AAAATGTTTTCAATATACAGTATTTGTCTTCTTCTCTGACACTATCAGGT
CTTTGCGGTCATTGGTGGCCAACTTCAGTTGCCATGCCAACCATGTCCAC
ACCCTTCCTCCCAACATCAAGGACAAACTGGTCCATCTCATGAGCAAGAG
GGGGACCATCAAGGATGACAACATTGGCAAGGTCATCTAAAAATAGTGAC
GTTACTATCAGTCGTAAAATGGCCATCTTCTTGCCAGTTGCTGAGAAAAT
TGAACGGAAAAAACTGACTTAGGGGATCATTACATTCTGACCTATGTGGA
CAGGTTGTTACTATATAGACAGGAATGTTTGTCAATTGGAAAACCACCCA
AAAGTGGTCAAATTGCCCAGGTGGTCCTTATGTAGTGTGGTCAGTAGTAC
AAGTTTGAACTAGATGTAAATGTATGTGTGTATGGCTATCTGGCAAGCAT
GTACACATGCGTCCAAGTATAGTCTAATCTTGATAATTTAAGTTGTCATT
AACATTCACATGCAAGTAGCTGATGACATACAATGTAAAGGTACACAATC
AATATTTTGCTGTTTTTTTAATGATGTGTAACATTAAACATCTGACACAC
ATTAACAGGTAGTTCACCAGAAGATGCGAGAGTTGGACCTGAGTGAGAGT
GAGGTCAGTGACCTGAGTCTGGAGCAGCTGTCCGTGTGCCGTAACCTCCG
CAAGATTGACCTGAACGCTGTGAAGGGGAACACCACAACGGTCACAACTG
CAGGTGGGGGTAAATCATATGTTAAGGCCCATTCAACAAAGGAATTGGAG
ACCTAAGAACAGCAAAGAAACTCAGAGAGCTACGGCAGCTCGCAGGAAAG
AAGACACAGTGGAAAGAAATGAAGAAAGACTGAATGCAGCCAGAGGCTGT
TTCTACAACCTCTGAGCCGCAGAACACAGTGGATCATCATCATCATCAAG
GCCCATTCCACAGTACTAGTAGATACAAGTGGCTAATGTAGTTCTCCACT
GTTTGACTCCTTTTCATGTGGGATTTATTTCCCTAAGACAAGTAGACAAA
GTACTCATATAGAGTCATAAACCACAAACGTGTACCAATATATACTGTTG
ACATCTTGCAATATAATATGTCAAAATTGTGAATCCAGATTTTTCTCAAA
ATTCAATACAGGCTTTCCCTATGATGTCATTTGCGCCATGTTCAGATTAC
AGTACACACGTCTCTCAACCACGCTGATATTCTGCCGTTTGATCAAATTA
CCTGCCAACATGGTCGCCGAGGGATTCAAATTTTTATCACTATGAGTATG
ACGTCAAGGAAAAGCTATTGCTGGCAGCTATAGGATCAATCGGTTTTCCA
AAGTAATGAAGACATGAAATTCTATGTATACATGTATGGTACTTGAAGTT
TTAATGTTTGTCTGGTTTAGGTTATAATGTGTTTAATCAAAAACAATTTT
TGACATATCATCCACTACTGCATAAGATTTTTGAAAGATAGAAGAGAATT
TAAGACCTTTTTATATGTTCTACCCCCCATCCCCAGGAATCATCTCGTTG
GTACGTTCCTGTCACCTGTTGCAGGTGGTTCATCTGCGTAGGTGTATAGA
GATAACGGACGACGCCATCGTAGCTCTGTCCGAGAACTGTCGCCAGCTGA
TGTGCCTCAACATCGGGGGCTGCGCCAAGATCACAGACCGGTCCTTAGAG
GCACTGGGACAGAACTCCAGGATGCTGAGAAGTATCAACTTTGGACACAC
TAAGGTTAGGTTTAGATCTGAGGCTATTAGCTAGCAGGGTGTCAGGGTGT
CTTCTGGACGCCTCCTTCACTAACAAAACAATGAAATGAGTCACCTAATC
CTTTTGCAGAGGACATGCTGTTTCCTGGTATTACATGCACTTGAACATTG
TGTTCCACATACACACACACTGCAACTGTTGTTTTTTGCCATTAATGACT
GTTGTATCACCAAGAAATGGATGGAGCAAGTGCATTGTGGAAAGCAGGTG
CTTTCTTAATTGCCTTTGCCATTATTCTTAATCATGTGTCATAGTATGGC
AAAGATGATTAACAGACTATTCCATAAAATGGTCTGCCTTCATACAGGTC
ACAGATGATGGCGTCATCAGCTTGGCTACTGGGAAATGCAGACAGTGTCT
GACGGTGGGTGAAGATGTCATTGTCTGTGGTTGAAAATTTGTACATGTAT
TCTAAAAACGAAATTTACTTTTCAAGTCTTAGATCTAGAGATCCTGCATT
GTTGGTATCAAACCGCTTCCAACACTTATTACAGTTTCCAAGGAGGTAAT
GGAATAAGATGAAAGCAACTGGGGCCAACTTTGATGTTTTCAAAGTGTTC
TCCCTCTTTATGTTTTCATAATGGAAATATTGTATAAAGTTAAGAGTGTA
CAGTTCAGTTCATCTCTGTGCGGTGACACAAAGGTCTCCACAGGCCCCTG
TCGAGCATGACAACGTGGAGTTCATAATCTTGAAGACCCAAATACTCTTC
AGTCACCTTCTTGAGTGTCAAAGATGGGTGACCATGCCTATGATTCTCAT
CCATTTTCCAAAGAAGAACCATGTCAGCCATTTTCTCTTTTGTACAATGC
ATCTAAATCCCCCTTTTCCTGCCCCTGTAGGAAGTGCACATGGATGGCTG
CCAGCTGCTGACGGATGATGCAGTGGAGGTGATCATGGAGAGCTGTCCTC
GCATCTCCATCCTCATCTTCCACAGCTGCCCAAAACTAACCGGTACGTCT
AAGCAATCAGTGAAACACCTTACCTTACCTTAAATAGATCCTCTTGGCGG
CAAACTTTCTTATTCCAAAGGTCCCAGTTTTGTGCTGCTTCTGCCATATC
CTGAAGAGAATTTAATCCGAGTTTCTTCCCATCATTGTGTAATGTTCGTC
GAAGAGTGATTGGTGCAACAAGTTGAGGGAAATAGCTTCTATAACCTTTG
ATATTTTTTGTACCAGGATTTGCTTGATTGTTTGGATCTGAAGTTGTAAC
TCTTTAATTGTAAGTGCTCATCAAGGTTAGAAAAGTCACCCTAGCAGCTG
TCTTTCAAACTGCAGATTATAGGACTGTTATTTCTATAGAATTCTGAAGA
AACTAGATTGTGCTCTTTTGAAAGAAGCTGTATCTGTGTGGAGTATATTG
TAAATTCATTTCCTTTCATGTTGGTTTGATTTTCATGGTAGGTCAGGGAA
AAGGTTTTTTCTGCATTTCAAATTTGGGGCTGAAACAATTCTGTAGCACA
GTAGTCATGCAAGGGAGACATATTCCTGGTGTCATGAATTTGTGGTGAGG
TCACCATTAAAACAAAACCTGTAGTTTTGTTACACAAGTTATGAAACCAA
ACACTACATATGTTTGGCCAATTAGGCTTATTGATCTTCTCCTCTTTCCC
CCAGACCGTTCCAGAGTGGCTCTGGAAGAGTTGAGTGGACCCAACTCCAA
GATGAAGCAAGTGACTTGGACCATCTACTAA Coding sequence (CDS) from alignment at Sc0000003:5515359..5519689+ >Blg00842.0 ID=Blg00842.0|Name=Blg00842.0|organism=Branchiostoma lanceolatum|type=CDS|length=792bp|location=Sequence derived from alignment at Sc0000003:5515359..5519689+ (Branchiostoma lanceolatum)
ATGGCGGCACATGTAAACAATCATTCGTCCGTTACATCGTTGCTCAGCTG
GTCTTTGCGGTCATTGGTGGCCAACTTCAGTTGCCATGCCAACCATGTCC
ACACCCTTCCTCCCAACATCAAGGACAAACTGGTCCATCTCATGAGCAAG
AGGGGGACCATCAAGGATGACAACATTGGCAAGGTAGTTCACCAGAAGAT
GCGAGAGTTGGACCTGAGTGAGAGTGAGGTCAGTGACCTGAGTCTGGAGC
AGCTGTCCGTGTGCCGTAACCTCCGCAAGATTGACCTGAACGCTGTGAAG
GGGAACACCACAACGGTCACAACTGCAGGAATCATCTCGTTGGTACGTTC
CTGTCACCTGTTGCAGGTGGTTCATCTGCGTAGGTGTATAGAGATAACGG
ACGACGCCATCGTAGCTCTGTCCGAGAACTGTCGCCAGCTGATGTGCCTC
AACATCGGGGGCTGCGCCAAGATCACAGACCGGTCCTTAGAGGCACTGGG
ACAGAACTCCAGGATGCTGAGAAGTATCAACTTTGGACACACTAAGGTCA
CAGATGATGGCGTCATCAGCTTGGCTACTGGGAAATGCAGACAGTGTCTG
ACGGAAGTGCACATGGATGGCTGCCAGCTGCTGACGGATGATGCAGTGGA
GGTGATCATGGAGAGCTGTCCTCGCATCTCCATCCTCATCTTCCACAGCT
GCCCAAAACTAACCGACCGTTCCAGAGTGGCTCTGGAAGAGTTGAGTGGA
CCCAACTCCAAGATGAAGCAAGTGACTTGGACCATCTACTAA
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg00842.0-exon-Sc0000003-1570713199:5515359..5515408 | Blg00842.0-exon-Sc0000003-1570713199:5515359..5515408 | Branchiostoma lanceolatum | exon |
| Blg00842.0-exon-Sc0000003-1570713199:5516257..5516389 | Blg00842.0-exon-Sc0000003-1570713199:5516257..5516389 | Branchiostoma lanceolatum | exon |
| Blg00842.0-exon-Sc0000003-1570713199:5516817..5516961 | Blg00842.0-exon-Sc0000003-1570713199:5516817..5516961 | Branchiostoma lanceolatum | exon |
| Blg00842.0-exon-Sc0000003-1570713199:5517745..5517962 | Blg00842.0-exon-Sc0000003-1570713199:5517745..5517962 | Branchiostoma lanceolatum | exon |
| Blg00842.0-exon-Sc0000003-1570713199:5518306..5518362 | Blg00842.0-exon-Sc0000003-1570713199:5518306..5518362 | Branchiostoma lanceolatum | exon |
| Blg00842.0-exon-Sc0000003-1570713199:5518839..5518950 | Blg00842.0-exon-Sc0000003-1570713199:5518839..5518950 | Branchiostoma lanceolatum | exon |
| Blg00842.0-exon-Sc0000003-1570713199:5519613..5519689 | Blg00842.0-exon-Sc0000003-1570713199:5519613..5519689 | Branchiostoma lanceolatum | exon |
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000003 | genome | Sc0000003:5515359..5519689 + |
Properties
| Property Name | Value |
|---|
| GeneID | Blg00842 |
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