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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000003:5254379..5262040+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg00823.0 ID=Blg00823.0|Name=Blg00823.0|organism=Branchiostoma lanceolatum|type=mRNA|length=7662bp|location=Sequence derived from alignment at Sc0000003:5254379..5262040+ (Branchiostoma lanceolatum)
CTCACCCCTCCGCGTTGGTCCAAATCTGTCCGCCATGTTGGTTTTCTAGG
TGGGAGTTTCGTTTCGTATTTTGACTTCCCGAAACTGCGAAAAATCACTC
GTGTTTGCCTTAAAAACAGCATCATCGTTCTTCTAAGACAACAGTGGCGG
CAAAAAGGTAAGTGTACGGCCTTGGTTCGTGGGAAGATGCTGCTTTTTGC
GAAGATTTTTTAAACAAGTGAAAGCTTGTGACGTAAAACTTGTTTGCGAG
GCGGGTTTGGGGAGGGGGGCAACGTTCTTGGATTTCCCGTTTTCTTGGAA
GTCGACACGTTCCTTTCGTATTCCCAACATAACGCAGACACTTGCAAGAT
TTCAATACTTTTTGTTGAAACAGAGAAGTTTCGTATCAGGATGGATTGAG
GGCTGTTTGTGTGAATTTGTCGAAAAAAATGTTTACACTGTCAGTAGTCT
AATGATCACATAGTTAGCAAGAATGAGCAGAAACAATTCACCAGAAAGAT
AGAAAATATACCACATTGTCGTATAACTTCAAGGAAAAAAGTCCCCACAA
CAGCCATTGTGATCGACAAGAAAAATAGATACTATAATAGTATAACTAGT
AAAAGTATAATAATTTATTCAACATTGACCTAAATTTGTTCCTATCCTAT
TTTTTTAATCCCTTTTGGCTAATATCCCAGTGTTTTAGAAGAAGATTTAG
ACAAAGATTCAACTTAGGCTATAAGTATAAGAAGTCAATTTATTTGGGAA
GACACAAGGTAATTGACGGAGTTGAAATAGTATTTGTAATCATGCATGTA
ATTTGTGTTTGTTCAAACCAGTCACACTAGTACTGGTATTCTAAGAAGCC
CAGCCAAGCCCAAAGATAATTTGTTCTTGATTATTCTGTAAACAAACTAT
CAGATACAAATTACAATACTTTTGATATTTTGTCCCAAGATATCAATTGT
ACATATTACTACAATAGAGTTTTCTTTCTGGAACTGGTAATACTATGATA
GTATATTATACAGGATATGCAGGAAGTATGCAAAAGTTCTTAAATCAAAA
GCAAAATTTGATTGAAACGTTATGATATTATGAAAAAACTTCCATTCATC
ATCAGTATACGATTATCAGAGAGTATATCTTCTGGCCACTTAGCCAGAGT
ACCATCCTCCGTAGTAACCGCTGGCTCAACTGTTTCGCTTGCTTGCTAAT
CCATGGTTAGCAACTGGAAACAATTGAGCCGGGGGTTACTGGGGAGGATG
GTACCCAGGTTACTGGCCATGGCCTCTGCAGTATCAAAGAATAATACATG
TAGTCTATAGTTTGATACCATGGCCATATTTATATATCAAAACTACCCGT
ACTTAAGTGTTCAATTTGTGTTGTTCAGGAGAGGTAGGCAATGCTCATTG
CCAGGAGCTGTGTATGGACATGTGTTATCCTGAATAGAGACAAGAAAACA
AAACACTGCCATCAACATTCAACTAGCCGAGGATGGAGAGACCAGAGTAT
GAGCAGGTGTGTAGTGTAGTGTAGTTTATGATAGCTATGATTTATAAATG
TGCAGTAATTAGGAATGGCGAATAAGTTATTTTGTTATTAAAACAGAGAT
TGTACGTAAAGAAGAAGAACTTTATTGCTCGACAATTGCAAGTGGTACAA
TGTATGGCAACATACGCACATGAGGGTTGAACTATTGCTAATGTAAATGC
ATTAACTTTTGTGATTTGTTTATTTCATGGTTGGAGAAAAAAGGATGTTT
TCGCAGCGTTTGAAGTTTGCGATTGAAATAAATCTGTACATACATGTAGT
ACAAATTATACTACAATTGAATTAATATTAGTAAGACTACTAAGACTTTG
CAGGTAAAATAAAACCGCAAAAATTTCAAGATTTGCAATATTGCCTTGGA
CTTGTAGAATTGGTTAATATGCGTGCCATTTTTGGTGGTACTCTATTAGT
ATTTGGGTTACCTTTGTTTGATGCATTCAGACAACAGCGTGTGTTCGTCA
TGTACTGTACATTCACATTTTCAGAGGTCAACAGCAGCAGAGGCACTGTT
AGACCTGTCCACTGCCTGTAGGTCCCAGGACACCAAGGATAATGTACAGG
TAAGAACACAAGATACATGTAGCACAAACCTACAGTACAGGGGTCCAACA
AACCTTGAATCACAACATGAACACTTTCAATTGGTAGATCCTACTTCCTA
GATAAGTCAAAGAAATTAACTTAAATCCTTAAATCCTTAAAAATCCTCAT
TTAGATATTGTGGATCTATTTATTCTTCAGGACCTGTCAAGACATATATT
GAAGACATGAATTGTTTTACACCATCTGTAGTTGATAATCACTTATGCCA
GATACAAACTAAAGGTTGTCCACCTTCCTCAAGCAAATTGATTTTTTACA
GCAACCTGTTAAATTTATCCATATCTAATACTAGTAATAGGTTGAACAGT
GGGCAACTTAAGTTTTTTGCCATTCTTTCATCAGGAAACTATACTTTTTT
TCTTATATAGATCTTTATACATGTACTAATTTATACTCGACAAGCAGAGG
AGTGGGTCCGGCTGGTTTTTGTTGGACTGTCTACTTTGTCTCTTTTACTT
TTTGTCACCAACCCACACAACTTTTTGTCAGTTGGTGACAAAGAGAAAAC
GAGACAGAGCAGACAGTCCAACAAAAACGCCTAAAAATATGTCAAAAACC
AGCCAGACCCACTCCTCTGCTTGGAGACTGCTAATTTTAGACTCTACCAT
ATAACACGTTCATGACCTTATGCTCTTGAACTTCGTACGCCCTCTGTGTT
CACAGAACAAACACACTCAAGCCATGCCTGTGGCGGAGAATTCCCGCGAG
CGGCTTCGCCCGTGGCTCATTACCATGATCGACAGCGGCGCGGTGCCCGG
CCTGGATTGGCTGAACGAGGAAAAGACGAAGTTCAAAATTCCCTGGAAGC
ATGCTGGGAAACATGAGTACAACCAGGACAGGGACTCCCTCCTGTTTAAG
GTCTGTAAATAAATATTAATGTTGAACTTTGATTCCCTAACTTTTAGGCC
ATGGACTATGAGAAACAGCCTAGTTATTGGTGTATTTTGTACGGTTTTCA
ATGTTATTACATTGTTAATGCCTGATATAGACAATGTATATTAGTACTAT
TATCCTGTTTTCTATCAGTTTTTTTGGTCTGATTTTTTCCAATACGTCCC
TTTCCCTGAACTTAAAGTTTAAGAATTGTTCATTTATTTTTAGGAATGTA
AGTTGTAAAGTCTTGTATGTAATTAATATAACAAGCCTTAAACGCTTGTC
TTGTGGGGCCCATATGTGTATGGGTATCACATTAAAGTCCCTATATGCAG
GTCCCGTATATGTACAGACTTGGGTATTTCTCAACTGAACGCGTAATACT
GCAGCAAAACGCACCGAATACAGAAGTAACTATGCCACAGCAGTGCAGTC
AAGGGCCAATGACCTGATTAAGAATTCAAATTGATGAAATAAATTGCATA
AAAAAACGCCAGCAGGACATGGGTTAAATGTCAGAGAATTCCACATTTTG
ACTCTCACAACTTGTTGTTTTGAATTGACAGGAGTGGGCCAAGTACACAG
GGAAGTACCGTGAAGACGTAGACAAGCCCGAGCCTGCCGTCTGGAAGACG
CGGCTGAGATGTGCGCTGAACAAGCACCCCAAGATCCACGAGGTGAAGAA
CGAGAGCCAGCCTGAAGACTTCCACAACCCTTACAAGGTCTACGTGTTCC
AGGACAAGACAGGTGGGTGGTAGAGAATGATATGATCTTATTATACTGTA
AATACAGAAATGTTTGTGGGGATTGAATTTCGCGGTAGGGAGAGAATGGA
GTGTTTGCGCCGGTTTTGATTTTGTGTTTGAAACAATAGTAAGGCTACAG
CTTTTCACGGTTGTTTTAAGTATGTGGTAAAGAGTTCACCGCAAAAACCG
CGAACTTAAAACCACTGCAAACATTTCTGCATTTACAGTAGTTTGTACAT
TATGTAATCATTATGATTCCATTGGATTTCAAGAATCAAGGGAATCATGA
TCAAACCTGTTTTGATTCTTCAGAACTACATCAGTGTTTGTGTTACGCAT
GTTTTTTTCCCCATGTTTTTGTCCAGATGAGAGAATCAGTGTAAAGAAAC
CCCTGCCAGCAGGCCGATTGTTGGGTGCCAGTCTGGAGGGCTTTGAGACA
ACAGAAGGTCCAGTCATCTCATACACCACCAACCCCACAAGTATGTTCTT
ACCATTCCCTGTCTGAAATCATCTTTGGTTTTTCAGTTAATGTCAAAATC
CTCCCCACACAATGTGGTGTATCATAGGGCGACACCCATCTCTGTTTCTA
TAGCTCTCGGGCCACACAGTCGTGCAATCACCGCAGCAGGGGACTAGTCC
ACTGGTAGTGGTGTGACTTTAACTGGCATTATGGTACTCTTTTCCAGAGC
TGAGTGCTAGGCAGAAAAAGCAGTATCTACCATTTTAATGTCTTTGGTAT
GACTCCAGTGAACTCAAGTATGGAAGAACTAATGAACATGAAGAACTTGG
GAATGTATTCATTTTGCAAACATACCAGACGGTATCCAACAACAGCCAAA
ATAATGAAATTTTTTGTGTCTTCTTTTAGTTATTGAATTTTTTAATGTTT
GTTTTCATGTCTTTCCCAGATGAGAGAGTTGGCAGTAAGAGACCATTGGT
CACTGCGGGTCACCTGATCCTGACCAGCCCAGACTCCACCAATACCTGCA
CTCCGGAGCCGATCACACAACGTGCTGTCGCAATAGGTATGGAAACTGTC
CTAAAGCCCTTGTCACTCAGTCCACAAACTTTGGCCGTACATGTATTTGT
TGATCGTCAGAAGTTTCTGTTTGCCAAATTTTCTAATCAACAGAGAGTCA
AGCGTTTCTAACCTTAAATCTACCCTTTCATATTTAACAGGCTCAATGAC
CTGCATACATCGGCCAATCCCTCAAAATTGTGGGATTATTTATTTAGAGG
ACACCAGGTCTATTACTGGCGAAAATGTCATTTAGAGCTTGCACACTCAT
CAACCGATCATCTTCCTGTTTGACAGTAGCTCTGAGACTCATAATACACA
CTTTTACATCGCACTTAATTTGCTAAAGATCAATCAATCTTGAAGAATCC
AGATTCTGAAGAAACTCTTCAAAGTTTTGAAAGGAAGGTATCCTGTAACC
ATTTCATACATCATTGTTCACTGATGTTGCTGTAAGTGTATTGAATGTTC
TATTTCATAACTATAGTGACAAGGTGGAGAGGCACGCCTGACCCCGACGA
CAACATCAATGTTGTAAACAAAACGATCAGGATCGAGGGACAACACGACG
CTTCAACAAACACAGCCGGCTTCGTGTGCAGAACGACACAACCGGAACAA
ACCCTCATCAAAAACAGCACTCAACCCACAGCCAATGTGGCATTCGTCAC
AACAACACAACCAAATCAGACGTTTGTCAAAACGAACAGCCAACCCGAGT
TGCCTGCCAATGCATCCTCCATCATGGGTAGAATGTTCTTCAAGATTAGG
CCACCAAACCCTACCATACGGCCTCACCTGATTGTAGATGTAACACCAAA
CAAGTGTAAGAAACCGGATGAGGCTTCGCCAAACCCAGCGGTCCCTATGG
ACACGAGGCCTCTCACAGTTGAAATGCCAGAAGACTTGACTCCCAAACCT
GTAACTATCACAGACGGAAGGTTTATCAAAACTGAAAACATACAAGACAC
TCCCACCGATCTGTCTACACCTAAGGGACCCAACCAGGTAAAGACAGAGA
GGCTAGAAGATCTTTTGGCGAGGAAGTCCCCAAAAGTTGAAGTAAGGCAC
GATAATAAGATTGAAAAACCAGACGATTTGTCCGTATGCACTACTACGCC
GATGGAAGTAGCAGACGTCAGACCAGAAACGCAGCAGCTAACATCAGAAC
ACGCGGCCAGATTCACAATAGGACGCTGCATCAAAGTTGAGAAACAGGAC
GGAGGCTCTTCGAACAACTGCGTCCTCACAGACCAAAAGCAGCACAGCCA
CAACGCACAGGAGAAAATGGAGATCATCACCTTCCACGAGGAACCGTTAC
CCAGACAAGAACCGTCGCCCGTCAATGGTCAGAAGATCAACGTATGCCCC
CTGTGCGGGGATAGGACGGCCAGCGTGCCAGAGTTCGATGCTCACATGCG
GGCTCACCAGTGGGAGAAACCATTCATGTGCGGGGAGTGTGGGTTCAGGA
CTGGCACCAAAACGGGTCTCTCCAAGCACATGAAGGCGCACTTCCCTAAC
TCACAACAAACGTAACACTGCTGTTTCTACTGTGTGTTGTGGGATGGTGT
CATATATAGGGTAGCCTTGGAACCAGTTATGTGTGGTACCGGTATCATAT
CCTTTTGTACTTTTCCTATTTTTTTTATAGATTTGAATAATCTGAATCCA
TTTTATTTTGATGTTTGGCTTGATATGATATGTGCGTACACATGTGCATT
CAATTCCTGAAAATGGATAGTACAAAGAAAAACGCTCATACAGGTATTGC
TACAACTTATATCATGATTCAAAGCCCAGCCTGTAAAATCTCTTGTCCCC
TGTATAAGAAAAGCAGACCCCATCTTAACCTTCAGCACTCTGAAGTAGCC
ATTTGACACCTCATTCTCTATTGGTTACAGAGTTAGGCAGCAGGGAGAAG
GTTAAAACACAAAGATCAGCTTTTAGCTCCTCAAAACTCTAAGCTACAAG
AAAGAACTTAGTTTCATGCAAGATACTCTGGGAAGCCTTTGAGAGATGAA
TAAAAAGATTTTGCCTGTCCAGCAAAGAGTGGATAAAAAAACCCTGCTTA
AAGGACATGTGTCATATTTCTACAGCAACATAAATATGATCATAAAAACA
GTTTTACATGACATTATCTTCAAGACGGAGAATCATCCAAATTTCATTTG
CATGAAGGATACTGGTCTTGTTTGTGTCAAAAGGGTAAAATTTATATCTA
AAGCTTAGTAAAAACTTGGTGTTAGCGTTGAAAACTAACATACAATGATT
TGAAACAGGGCAGGTATAAGTTAGGTGTCACTAGCCAAGAAAGAAGATAC
AAGACAGCAAAGAACTGGTATATAACAAAGAATATCATACATGTAACTCC
TATAGGAGCTACTCCAAAATGAACCCTTAGTTTGTGGTTTGACTTTGAAG
AGTATGTAGTGTAGTCTATTTATAGCAAAGTTCTTTTATTCACAACCAAG
TATTTTACAAGAGCCGACGTTTCGATGACTGTCATCTTCATCAGGGCAAT
ACTGACTAATGCCCTGATGAAGATAACCGACAGTCATCGAAACGTCGGCT
CTTGTAAAATGCTTGGTTGTGAATAAAAGAACCTTGCTATTCAGTCATTC
GCCAACCTGATGAAATTATTTACGGATAGTCTATTTATAGTTGAGATTGA
AGAAAATGACTGAAAGAAGTTCCTCCAACATAAGACTACAGACTATAGAC
AAGTGTGGCTTTCTTACCTCATGCTACATGCAAGCCAAATGTACAGACTT
CAAATTACCTCAGCATACCTGACGAATAGTAACATTATTACAACTTCACA
GATTTATTGGCAAATAACATGACAGCTCTGAATCAAAGTTGAACTGCAAA
TCGCCAACAGAA Coding sequence (CDS) from alignment at Sc0000003:5254379..5262040+ >Blg00823.0 ID=Blg00823.0|Name=Blg00823.0|organism=Branchiostoma lanceolatum|type=CDS|length=1755bp|location=Sequence derived from alignment at Sc0000003:5254379..5262040+ (Branchiostoma lanceolatum)
ATGGAGAGACCAGAGTATGAGCAGAGGTCAACAGCAGCAGAGGCACTGTT
AGACCTGTCCACTGCCTGTAGGTCCCAGGACACCAAGGATAATGTACAGA
ACAAACACACTCAAGCCATGCCTGTGGCGGAGAATTCCCGCGAGCGGCTT
CGCCCGTGGCTCATTACCATGATCGACAGCGGCGCGGTGCCCGGCCTGGA
TTGGCTGAACGAGGAAAAGACGAAGTTCAAAATTCCCTGGAAGCATGCTG
GGAAACATGAGTACAACCAGGACAGGGACTCCCTCCTGTTTAAGGAGTGG
GCCAAGTACACAGGGAAGTACCGTGAAGACGTAGACAAGCCCGAGCCTGC
CGTCTGGAAGACGCGGCTGAGATGTGCGCTGAACAAGCACCCCAAGATCC
ACGAGGTGAAGAACGAGAGCCAGCCTGAAGACTTCCACAACCCTTACAAG
GTCTACGTGTTCCAGGACAAGACAGATGAGAGAATCAGTGTAAAGAAACC
CCTGCCAGCAGGCCGATTGTTGGGTGCCAGTCTGGAGGGCTTTGAGACAA
CAGAAGGTCCAGTCATCTCATACACCACCAACCCCACAAATGAGAGAGTT
GGCAGTAAGAGACCATTGGTCACTGCGGGTCACCTGATCCTGACCAGCCC
AGACTCCACCAATACCTGCACTCCGGAGCCGATCACACAACGTGCTGTCG
CAATAGTGACAAGGTGGAGAGGCACGCCTGACCCCGACGACAACATCAAT
GTTGTAAACAAAACGATCAGGATCGAGGGACAACACGACGCTTCAACAAA
CACAGCCGGCTTCGTGTGCAGAACGACACAACCGGAACAAACCCTCATCA
AAAACAGCACTCAACCCACAGCCAATGTGGCATTCGTCACAACAACACAA
CCAAATCAGACGTTTGTCAAAACGAACAGCCAACCCGAGTTGCCTGCCAA
TGCATCCTCCATCATGGGTAGAATGTTCTTCAAGATTAGGCCACCAAACC
CTACCATACGGCCTCACCTGATTGTAGATGTAACACCAAACAAGTGTAAG
AAACCGGATGAGGCTTCGCCAAACCCAGCGGTCCCTATGGACACGAGGCC
TCTCACAGTTGAAATGCCAGAAGACTTGACTCCCAAACCTGTAACTATCA
CAGACGGAAGGTTTATCAAAACTGAAAACATACAAGACACTCCCACCGAT
CTGTCTACACCTAAGGGACCCAACCAGGTAAAGACAGAGAGGCTAGAAGA
TCTTTTGGCGAGGAAGTCCCCAAAAGTTGAAGTAAGGCACGATAATAAGA
TTGAAAAACCAGACGATTTGTCCGTATGCACTACTACGCCGATGGAAGTA
GCAGACGTCAGACCAGAAACGCAGCAGCTAACATCAGAACACGCGGCCAG
ATTCACAATAGGACGCTGCATCAAAGTTGAGAAACAGGACGGAGGCTCTT
CGAACAACTGCGTCCTCACAGACCAAAAGCAGCACAGCCACAACGCACAG
GAGAAAATGGAGATCATCACCTTCCACGAGGAACCGTTACCCAGACAAGA
ACCGTCGCCCGTCAATGGTCAGAAGATCAACGTATGCCCCCTGTGCGGGG
ATAGGACGGCCAGCGTGCCAGAGTTCGATGCTCACATGCGGGCTCACCAG
TGGGAGAAACCATTCATGTGCGGGGAGTGTGGGTTCAGGACTGGCACCAA
AACGGGTCTCTCCAAGCACATGAAGGCGCACTTCCCTAACTCACAACAAA
CGTAA
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg00823.0-exon-Sc0000003-1570713199:5254379..5254535 | Blg00823.0-exon-Sc0000003-1570713199:5254379..5254535 | Branchiostoma lanceolatum | exon |
| Blg00823.0-exon-Sc0000003-1570713199:5255757..5255884 | Blg00823.0-exon-Sc0000003-1570713199:5255757..5255884 | Branchiostoma lanceolatum | exon |
| Blg00823.0-exon-Sc0000003-1570713199:5256403..5256477 | Blg00823.0-exon-Sc0000003-1570713199:5256403..5256477 | Branchiostoma lanceolatum | exon |
| Blg00823.0-exon-Sc0000003-1570713199:5257184..5257378 | Blg00823.0-exon-Sc0000003-1570713199:5257184..5257378 | Branchiostoma lanceolatum | exon |
| Blg00823.0-exon-Sc0000003-1570713199:5257960..5258140 | Blg00823.0-exon-Sc0000003-1570713199:5257960..5258140 | Branchiostoma lanceolatum | exon |
| Blg00823.0-exon-Sc0000003-1570713199:5258505..5258618 | Blg00823.0-exon-Sc0000003-1570713199:5258505..5258618 | Branchiostoma lanceolatum | exon |
| Blg00823.0-exon-Sc0000003-1570713199:5259048..5259164 | Blg00823.0-exon-Sc0000003-1570713199:5259048..5259164 | Branchiostoma lanceolatum | exon |
| Blg00823.0-exon-Sc0000003-1570713199:5259645..5262040 | Blg00823.0-exon-Sc0000003-1570713199:5259645..5262040 | Branchiostoma lanceolatum | exon |
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000003 | genome | Sc0000003:5254379..5262040 + |
Properties
| Property Name | Value |
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| GeneID | Blg00823 |
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