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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000003:5580384..5586343+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg00821.1 ID=Blg00821.1|Name=Blg00821.1|organism=Branchiostoma lanceolatum|type=mRNA|length=5960bp|location=Sequence derived from alignment at Sc0000003:5580384..5586343+ (Branchiostoma lanceolatum)
CGGCGGAATAGAATGCGCGACTAACGTTACGCGGTTTCAACGCGCCAGCT
GATGATCTGTTGCGCCAGGTTTTTTGAACTGGGCATAATTTAGCCGGCAT
TGACAGCGTTAGACAGCAGATATTCCTCGCAGTTATGCGCGATCTAGCCA
AGGAGAGGGGCAGGAAAGCCCGTAGCAGGAGCAGAAGCGTGTGCAGGGCA
AAGGCGGTTGGGGCCGAGGGGAGAGAACACGCACCGAGGCGCGCCGAGAA
ACAGGCGGGAGAGGACGTTCAGGACACCGCCAACGAACACAACATCTGCT
GCTCACCTAAGGTAACAAATCAAGCAGTTTTTGCACTAGCGTTGTATCCC
GGAGGATATAAAATCTGTCCAGAAAATGAGGCCTGAAAAAACTTTGAAAG
GAAAGTCTACTTGACTTACTTGAGGTTCACCTGAGCCCACCTCCGTCAAA
TTATAGAAATGCAAAATTAAAACATAAATATTTAACTGACGGGAGCCACT
CTCTCATTGGCCGAACCGCTTATTGCCATTCTATCATTGGCTGAACTGCT
ATAAACGGTTTTGGACAGTCAGATTCGGTCCATTGAGTTAGGATTGATTT
AAAGGTTCCCTGACAGTTATGTATCTCCCACAGTTTCCTCAATTTATGTG
CATGATGTTAGAGACAAACCTAAGTGAAAACGATGACATAACTAATGTAG
ATTGTAAATGGACGAAATAGCAGAACTTTAAAATTATTCTTAGACTATTC
AACCTGTGTTGATTCACTCAATTGCCTTTTGCACCTATCAAGAAATCTGT
GGAATAATGTTGCTTGTTTTTGTTTACAGGGCTGTCGTCATGACAACAGC
AAGGAAGTGACGGACTTGGCTTCTGCAGTGAAAGTTGTGTGCTCCTTCAA
GACTTGTAAGGAAGGTGTCTTCATGCACGAGGACTGCTTCTTGGCTTGGG
AGGACGACATCATCAAGAACCTGCAGGTAATGTTTGTTTGTTAGTTTGTT
AGTATTGTATACCCAGTAAACCACCTCATGGCATAACAAAACAGTACAAG
CTGCATATAGAGACAAATTCATTTCATCCACTCACCCCTGCTATGTTTGA
TAAGTGTGATGGGTTCTTAAACGTCTTGTGGTGTGCTCTCTGCAAACAAG
GGAACAAAATTTTTTACGTCCTATCCGAGGCACGTTCCTAACCGAAGTTA
GGTACATATACTCATTTTCACTTGACTGAAGTGAGGAAATACATGTGTGA
ACTGCCTTTCCCAAGGGCACAACGTCAACGAGCATGTCAGGGGATTCGAA
CCCAGGACATCTGGACATCTGGGTTCTGGGACTGCCATTACACCACCGTG
ACCCTTTACGTGATGTCTATTTAGATTCAGACTTGTATCATTTTTTCTGA
CTGTGTGTTGTTGTTTATCTATCTATCCCAGAGTCACTTCTGCCCTCAGA
AGCTGGGCCGGCTCTAGAGTTCGTCTTCACCTTATGTACCTATCAATTCA
TAGTTTTAGGTTTAAAAGTCTAAAAATCTCGTCCAGTCACCAAGAAAAGG
TAGTGGACGCTATATGTACCTGAAACATTTGACCATTTTCGAACTCTATC
CAGTAGCTTGAATAACTGCTTTTCTGCAAATTTGCTGATCATGTTTTTTT
TTCTATCTTAGAGTCACTTTCGTCCCCAGCAGCTTGGCCGGCTGCAGTCC
TGGTCGGTGCAGCAGCTGCGGAGAGACCTGTGGACCAGGCGGGTCAACGA
CGTCACCTACAAGGTAGTCACAGTTTGGTACATCCACAAACATAATTCCA
CCAGGGTACATATTCCGCCAACCTGAAAAGATACATCCAAACAGATCTCC
AACCCAACGTTACCCAGTATAATGCACTCCAGTATATCCAAACTGTGCAT
ACCTGGGGGTGCTGCACTAGAGGAAGTGGCAGATTTATGTAACCCGGCGG
ATTAATGTTAATTGAGGTTGGGAGTTTAAATCCTGGGTCGCAGTCCTTAG
GACGGGAAATAAGCCATGGTTCACTGTTCATAATGTGGTTGTCAAAAAGA
CCTAGTTGAATTTCTCTGTAACAATGCATAGGGTGTGTCTTTTCCGTCAC
CACCAGCAGAAGAATAGCTCTTCAGTGAGCTAAACTCAGGTTCAAGATGA
TATCATTTTCTTTCTTTCATTCCCAAGATCTGCATCTGCAGGTGCGGGGG
GTACCTGAAGAAGGATGAGGACTGGAGCGCTGAGAAGGATGCAGAGAAAC
TACGGTAATGCACACATGATGACGTGGTACCGTATCATATGACGGAATTG
TTATCGCGGCTCGAGGTCACATGAGAACTGTGCGAGAACTCACGAGAGCT
GTGAGTGAATCCGGGCCTCAGAGCTTGACACAGACAATGGATGAATTTGA
ACCACACACAAACTGGTGTGTCCATGGGGCGGACTTTACTCACAAGATGT
CACAATGTTTGTGATGCTCGTTGAAAAAATAATAAACTGGGGCCGACCCT
GGAATCAAACTTCGGCCCACAGATCCACGGAATTAGATCCAATGGCCAAG
CATCCGAGTTGCGTTACCTCTTGCACCAATTGATGCTTGGTATTAGAATA
ATTTCCAAGCAGATCTACACTGTGCACAGAAAATCGTATATGCTAGCCAG
AGAAGCTCCTGTCAGCCAGATAAGCTACGGTGCGGACTGCAGGTTATCTG
GCAGACTGGAGCTTATCTGGCTGACTGGAGCTTATCTGGCTGACTGGAGC
TTATCTGGCTAGCATATACGATTTTTGGCGCACCGTGTAGATCTGCTTGG
AGATTAGTATTAGAAGTCATTGAAGTAACTTTTTTCTTTCTTCCACTATA
ATAATTGTTTCTTTTTCGTGTGATTGTAAAGCTGTTGATGCCGTTATTGT
AGACATGACGCTGATGATGTAGCAGATAAGAAGAAGAAGAAGAAGAAAGG
AGACAAGCCGGGTATTCTCTGGGCCAAGAAGTCATGTCACAAGTTCACAG
ACATTGCCTCGACAAAACCATTTAAGAAGAATGCTATGAAGACAAGATAC
CTGATGGTAATAAGATATGTCCAATGACTAAGGACATATTATACAGACTG
AAAGATATTATGTTTTAAGATATCAGTAGGTAGATATAAGCTCCATAGCC
TATTTAAGGCTGTTGGGGCAGTGGTCTGTAATCCACTGTGTCTAGGGCAC
GGACATTGCCCGATCAAGACGATTTAAGAAGACAGCTGTGAAGACAAGGT
ACCTGACGGTAAGACATAGTCTGAATAACTATGCACGTAAATAGTCTGTG
AAAGATCATATCAATTTTCTTAACGTAAACTATAAGGTAAAGGTAGAGAA
CGGCAGTCCCATAGCCTTATTGAGGCAATAAGGTGGATTGTTTATCATAT
CCACTGTCTAGGGTATGGTTTTGGGAGGCAGAGTCCATCCCTCTACTTCC
ACTGTCTTTTACCTCCCCAACCAAAGTCAGGTACCCCTTTTTACACCTGG
GTGGAGTGAGGAAAGTCGTGTTAAGTGCCTTTCCCAAGAACACACCACCA
GTGGTATGTCAGGTGATTCGTACCCAAGACCTCTTGTTCTGGGCCAAACA
CCCTAACCATTATGCAAACACGACACCACTAAATGTCTGTAGAAACTAAT
TTTTGAGAAATATAGAATTAGCGATATGGAACAGATAGTTGTGGAGTAAC
TTTGAAAACAACATTGGAAGCTACAAGTGACTCTTTTGCTGGACCTCTAT
ACCCTCGTTGTAGTTGGTTGGTTTGGTCTGAGTGCACCGCTTCATCCAAT
TCGCTGGCTGTTTCATTTTCTTTAATTTTTTTATACAGGAGTCTAAGATT
CAGGTTATCCCGAATCCTTCCCAGGGTGCCATAGGAGGTCATGGGTCAGG
GGAACCGAGTACCAAGGTCACCTCTGATGGAACAGGTGAAAACTTTAAAC
TTTTTCTTGTCATATTAAAATTAACTGACAGTAGTCAATCAGCTGTGTAA
CAACAAGCTTATGTTAGCTGTCAGCTGATTTTTTTTCACCATGGATGAGG
TTTTTTAACATCCGGAAGGTTAATTTGTGTTATTTTTATGTAGCACACTT
CTGTGAATTGTAAACAAGTTTTATTTTGCTTGCTACATTAGGTAAAAGCA
ACCCTGAAAGAGGTCGGCCAGAAACCAGAAGTGTGACAAATAATGGGACT
TACATCCGATCTCCTAGCAACAATGCAGCCACACCTAGCAACAAGAGAGC
CTCACCCGACGACACACCCATTTCAGAAAGCCATGACGACAAGGACATTC
CGATGCCCCTGGCACTCACGGCAGCCTATTGGTGGATCAACTTTGGATGG
CTAACGTACCTCGACTACACCTTGTACGCAAACGACAAGCAAAGCGCCGC
CGACGCGCGCACGCAGGGTCTTGTGATGTGCAAGTCTGTGAACGATGTAG
AGAAGGCGTTAGGTTGTTGTGGTCTTGTAGCCGTGTCCGAGATGATGGGG
GAGTGGTGGCAGGAGGTGGGGTGGGACCAGTTCAAGAGTTTCATGGAACA
TCAGTGAGAAAATAACAGTGCTGTCACCAGAATGGCAACAGATTTGTATT
TTGTTATGGGCTTAGAAAGCAGGGAAAAGGTTAAAACAGCAAAGAAAAAA
GCCGTAAATTATGTTAAATTGTGTTACTATCTATTGATGGCAGTGCCAAA
AATGTTTTTCCTTGCTAATCAGAAACATGGGATCAGTTCTAGAGTTTCAT
GGAACATCAGTAGGAAAACATCTGTGCTGGGTTAAAACTGCTTAAAGTAT
ACACAGCTTAAAGTATACACTTGTCAATAAATAAATAAAAGTATACTCCA
TCACAAAGAATTTAAGCTATTAAATCATTTTGTGTTATTGTTCATCAAAG
TGCCAACTTTAAAGTATACTCCATCACATGGAAAGCTATTATGTCATATT
GTGTTATTGTTACCAAAGCGCCAACTTAAAGTATATTCCAACACATAGAA
AGCTATTACATCATTTTGTGTTATTGTTTAGCAAAATGCCAGTGAAAGGA
AATTTTTTCTATCCTTCACAAAGGGCAATGGTTTGTGACGTCACAGAAAG
GCTAGTATGGCTAGAGTCATTTCTGTGGCGTCAAAACCTGTTGCTAATTT
GTCCCACCAAATAGCTGTGACAGTAGACAATAATACATGTACATGTATTG
CATATTAGATGTTTTCAGAAAAGGCCAATTTTTTTGATGATATTGGCATT
TATCTCAGTTGATGGCAATGCCCAAAATATTTTACACTGCTGATTAGAAA
CAGCTTTGGTGGCAAGAAGTGTGATGGAATCAGTTCGAGGGTTTCATGGA
ACATCAGAGAGAAAATGACGGTGTTGGGTTAACCTTGAGCATGCTAAGGT
AGCTATTTGGCACCAGATTTGTATTTGTTATGGGCGTAGGCAGCAGGGAG
AAGGTTAAAACAGCATAAAGAAGCCCACCAGATAGAAAAGGCTATCAGTT
TGTGTTACTATATAAATGTATTGATGGCAGTGCTCAAAATGTGTTGCTTT
GTTGATTAGAAAAAGTTTTGACTTGTTTGAAATCTTATGACTGCAATCAG
AAAGCAAAAGCAGAAGTAAACATTTTTTTCCTCAAAGTTTAAGGTCATTT
TTTTGGAAATGCTGCACAAAACCTACTCTGATTTGTGTTGTAAGATTTGT
ATGATGGCCTTGTGAAGATGACGGATGTATTGAATATTTTTGTATAATTT
GAGCTGCAAAGAAAAGTTATAAGGAAGAACAGTTGTCAAGGCTTGTTATA
TCACTTATCAAAGGAAAAAAAAAGGAAAACAGTATTGAAAATTGGTGAAT
GCAATGTTCTGTTTTGTTGTAATATCATAAACATACAGTTTGTTAATATA
TTATACATATATGCAAGATCCTCGTGTTAAAAATAAAGAGAAATGTTTTA
ATTTACAACA Coding sequence (CDS) from alignment at Sc0000003:5580384..5586343+ >Blg00821.1 ID=Blg00821.1|Name=Blg00821.1|organism=Branchiostoma lanceolatum|type=CDS|length=1170bp|location=Sequence derived from alignment at Sc0000003:5580384..5586343+ (Branchiostoma lanceolatum)
ATGCGCGATCTAGCCAAGGAGAGGGGCAGGAAAGCCCGTAGCAGGAGCAG
AAGCGTGTGCAGGGCAAAGGCGGTTGGGGCCGAGGGGAGAGAACACGCAC
CGAGGCGCGCCGAGAAACAGGCGGGAGAGGACGTTCAGGACACCGCCAAC
GAACACAACATCTGCTGCTCACCTAAGGGCTGTCGTCATGACAACAGCAA
GGAAGTGACGGACTTGGCTTCTGCAGTGAAAGTTGTGTGCTCCTTCAAGA
CTTGTAAGGAAGGTGTCTTCATGCACGAGGACTGCTTCTTGGCTTGGGAG
GACGACATCATCAAGAACCTGCAGAGTCACTTTCGTCCCCAGCAGCTTGG
CCGGCTGCAGTCCTGGTCGGTGCAGCAGCTGCGGAGAGACCTGTGGACCA
GGCGGGTCAACGACGTCACCTACAAGATCTGCATCTGCAGGTGCGGGGGG
TACCTGAAGAAGGATGAGGACTGGAGCGCTGAGAAGGATGCAGAGAAACT
ACGACATGACGCTGATGATGTAGCAGATAAGAAGAAGAAGAAGAAGAAAG
GAGACAAGCCGGGTATTCTCTGGGCCAAGAAGTCATGTCACAAGTTCACA
GACATTGCCTCGACAAAACCATTTAAGAAGAATGCTATGAAGACAAGATA
CCTGATGGAGTCTAAGATTCAGGTTATCCCGAATCCTTCCCAGGGTGCCA
TAGGAGGTCATGGGTCAGGGGAACCGAGTACCAAGGTCACCTCTGATGGA
ACAGGTAAAAGCAACCCTGAAAGAGGTCGGCCAGAAACCAGAAGTGTGAC
AAATAATGGGACTTACATCCGATCTCCTAGCAACAATGCAGCCACACCTA
GCAACAAGAGAGCCTCACCCGACGACACACCCATTTCAGAAAGCCATGAC
GACAAGGACATTCCGATGCCCCTGGCACTCACGGCAGCCTATTGGTGGAT
CAACTTTGGATGGCTAACGTACCTCGACTACACCTTGTACGCAAACGACA
AGCAAAGCGCCGCCGACGCGCGCACGCAGGGTCTTGTGATGTGCAAGTCT
GTGAACGATGTAGAGAAGGCGTTAGGTTGTTGTGGTCTTGTAGCCGTGTC
CGAGATGATGGGGGAGTGGTGGCAGGAGGTGGGGTGGGACCAGTTCAAGA
GTTTCATGGAACATCAGTGA
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg00821.1-exon-Sc0000003-1570713199:5580384..5580694 | Blg00821.1-exon-Sc0000003-1570713199:5580384..5580694 | Branchiostoma lanceolatum | exon |
| Blg00821.1-exon-Sc0000003-1570713199:5581213..5581359 | Blg00821.1-exon-Sc0000003-1570713199:5581213..5581359 | Branchiostoma lanceolatum | exon |
| Blg00821.1-exon-Sc0000003-1570713199:5582045..5582146 | Blg00821.1-exon-Sc0000003-1570713199:5582045..5582146 | Branchiostoma lanceolatum | exon |
| Blg00821.1-exon-Sc0000003-1570713199:5582561..5582637 | Blg00821.1-exon-Sc0000003-1570713199:5582561..5582637 | Branchiostoma lanceolatum | exon |
| Blg00821.1-exon-Sc0000003-1570713199:5583286..5583439 | Blg00821.1-exon-Sc0000003-1570713199:5583286..5583439 | Branchiostoma lanceolatum | exon |
| Blg00821.1-exon-Sc0000003-1570713199:5584222..5584318 | Blg00821.1-exon-Sc0000003-1570713199:5584222..5584318 | Branchiostoma lanceolatum | exon |
| Blg00821.1-exon-Sc0000003-1570713199:5584525..5586343 | Blg00821.1-exon-Sc0000003-1570713199:5584525..5586343 | Branchiostoma lanceolatum | exon |
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000003 | genome | Sc0000003:5580384..5586343 + |
Properties
| Property Name | Value |
|---|
| GeneID | Blg00821 |
|
