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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000003:5580355..5586343+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg00821.0 ID=Blg00821.0|Name=Blg00821.0|organism=Branchiostoma lanceolatum|type=mRNA|length=5989bp|location=Sequence derived from alignment at Sc0000003:5580355..5586343+ (Branchiostoma lanceolatum)
GTGAGACCGTGGGGAAGTTCGAATGGAACCGGCGGAATAGAATGCGCGAC
TAACGTTACGCGGTTTCAACGCGCCAGCTGATGATCTGTTGCGCCAGGTT
TTTTGAACTGGGCATAATTTAGCCGGCATTGACAGCGTTAGACAGCAGAT
ATTCCTCGCAGTTATGCGCGATCTAGCCAAGGAGAGGGGCAGGAAAGCCC
GTAGCAGGAGCAGAAGCGTGTGCAGGGCAAAGGCGGTTGGGGCCGAGGGG
AGAGAACACGCACCGAGGCGCGCCGAGAAACAGGCGGGAGAGGACGTTCA
GGACACCGCCAACGAACACAACATCTGCTGCTCACCTAAGGTAACAAATC
AAGCAGTTTTTGCACTAGCGTTGTATCCCGGAGGATATAAAATCTGTCCA
GAAAATGAGGCCTGAAAAAACTTTGAAAGGAAAGTCTACTTGACTTACTT
GAGGTTCACCTGAGCCCACCTCCGTCAAATTATAGAAATGCAAAATTAAA
ACATAAATATTTAACTGACGGGAGCCACTCTCTCATTGGCCGAACCGCTT
ATTGCCATTCTATCATTGGCTGAACTGCTATAAACGGTTTTGGACAGTCA
GATTCGGTCCATTGAGTTAGGATTGATTTAAAGGTTCCCTGACAGTTATG
TATCTCCCACAGTTTCCTCAATTTATGTGCATGATGTTAGAGACAAACCT
AAGTGAAAACGATGACATAACTAATGTAGATTGTAAATGGACGAAATAGC
AGAACTTTAAAATTATTCTTAGACTATTCAACCTGTGTTGATTCACTCAA
TTGCCTTTTGCACCTATCAAGAAATCTGTGGAATAATGTTGCTTGTTTTT
GTTTACAGGGCTGTCGTCATGACAACAGCAAGGAAGTGACGGACTTGGCT
TCTGCAGTGAAAGTTGTGTGCTCCTTCAAGACTTGTAAGGAAGGTGTCTT
CATGCACGAGGACTGCTTCTTGGCTTGGGAGGACGACATCATCAAGAACC
TGCAGGTAATGTTTGTTTGTTAGTTTGTTAGTATTGTATACCCAGTAAAC
CACCTCATGGCATAACAAAACAGTACAAGCTGCATATAGAGACAAATTCA
TTTCATCCACTCACCCCTGCTATGTTTGATAAGTGTGATGGGTTCTTAAA
CGTCTTGTGGTGTGCTCTCTGCAAACAAGGGAACAAAATTTTTTACGTCC
TATCCGAGGCACGTTCCTAACCGAAGTTAGGTACATATACTCATTTTCAC
TTGACTGAAGTGAGGAAATACATGTGTGAACTGCCTTTCCCAAGGGCACA
ACGTCAACGAGCATGTCAGGGGATTCGAACCCAGGACATCTGGACATCTG
GGTTCTGGGACTGCCATTACACCACCGTGACCCTTTACGTGATGTCTATT
TAGATTCAGACTTGTATCATTTTTTCTGACTGTGTGTTGTTGTTTATCTA
TCTATCCCAGAGTCACTTCTGCCCTCAGAAGCTGGGCCGGCTCTAGAGTT
CGTCTTCACCTTATGTACCTATCAATTCATAGTTTTAGGTTTAAAAGTCT
AAAAATCTCGTCCAGTCACCAAGAAAAGGTAGTGGACGCTATATGTACCT
GAAACATTTGACCATTTTCGAACTCTATCCAGTAGCTTGAATAACTGCTT
TTCTGCAAATTTGCTGATCATGTTTTTTTTTCTATCTTAGAGTCACTTTC
GTCCCCAGCAGCTTGGCCGGCTGCAGTCCTGGTCGGTGCAGCAGCTGCGG
AGAGACCTGTGGACCAGGCGGGTCAACGACGTCACCTACAAGGTAGTCAC
AGTTTGGTACATCCACAAACATAATTCCACCAGGGTACATATTCCGCCAA
CCTGAAAAGATACATCCAAACAGATCTCCAACCCAACGTTACCCAGTATA
ATGCACTCCAGTATATCCAAACTGTGCATACCTGGGGGTGCTGCACTAGA
GGAAGTGGCAGATTTATGTAACCCGGCGGATTAATGTTAATTGAGGTTGG
GAGTTTAAATCCTGGGTCGCAGTCCTTAGGACGGGAAATAAGCCATGGTT
CACTGTTCATAATGTGGTTGTCAAAAAGACCTAGTTGAATTTCTCTGTAA
CAATGCATAGGGTGTGTCTTTTCCGTCACCACCAGCAGAAGAATAGCTCT
TCAGTGAGCTAAACTCAGGTTCAAGATGATATCATTTTCTTTCTTTCATT
CCCAAGATCTGCATCTGCAGGTGCGGGGGGTACCTGAAGAAGGATGAGGA
CTGGAGCGCTGAGAAGGATGCAGAGAAACTACGGTAATGCACACATGATG
ACGTGGTACCGTATCATATGACGGAATTGTTATCGCGGCTCGAGGTCACA
TGAGAACTGTGCGAGAACTCACGAGAGCTGTGAGTGAATCCGGGCCTCAG
AGCTTGACACAGACAATGGATGAATTTGAACCACACACAAACTGGTGTGT
CCATGGGGCGGACTTTACTCACAAGATGTCACAATGTTTGTGATGCTCGT
TGAAAAAATAATAAACTGGGGCCGACCCTGGAATCAAACTTCGGCCCACA
GATCCACGGAATTAGATCCAATGGCCAAGCATCCGAGTTGCGTTACCTCT
TGCACCAATTGATGCTTGGTATTAGAATAATTTCCAAGCAGATCTACACT
GTGCACAGAAAATCGTATATGCTAGCCAGAGAAGCTCCTGTCAGCCAGAT
AAGCTACGGTGCGGACTGCAGGTTATCTGGCAGACTGGAGCTTATCTGGC
TGACTGGAGCTTATCTGGCTGACTGGAGCTTATCTGGCTAGCATATACGA
TTTTTGGCGCACCGTGTAGATCTGCTTGGAGATTAGTATTAGAAGTCATT
GAAGTAACTTTTTTCTTTCTTCCACTATAATAATTGTTTCTTTTTCGTGT
GATTGTAAAGCTGTTGATGCCGTTATTGTAGACATGACGCTGATGATGTA
GCAGATAAGAAGAAGAAGAAGAAGAAAGGAGACAAGCCGGGTATTCTCTG
GGCCAAGAAGTCATGTCACAAGTTCACAGACATTGCCTCGACAAAACCAT
TTAAGAAGAATGCTATGAAGACAAGATACCTGATGGTAATAAGATATGTC
CAATGACTAAGGACATATTATACAGACTGAAAGATATTATGTTTTAAGAT
ATCAGTAGGTAGATATAAGCTCCATAGCCTATTTAAGGCTGTTGGGGCAG
TGGTCTGTAATCCACTGTGTCTAGGGCACGGACATTGCCCGATCAAGACG
ATTTAAGAAGACAGCTGTGAAGACAAGGTACCTGACGGTAAGACATAGTC
TGAATAACTATGCACGTAAATAGTCTGTGAAAGATCATATCAATTTTCTT
AACGTAAACTATAAGGTAAAGGTAGAGAACGGCAGTCCCATAGCCTTATT
GAGGCAATAAGGTGGATTGTTTATCATATCCACTGTCTAGGGTATGGTTT
TGGGAGGCAGAGTCCATCCCTCTACTTCCACTGTCTTTTACCTCCCCAAC
CAAAGTCAGGTACCCCTTTTTACACCTGGGTGGAGTGAGGAAAGTCGTGT
TAAGTGCCTTTCCCAAGAACACACCACCAGTGGTATGTCAGGTGATTCGT
ACCCAAGACCTCTTGTTCTGGGCCAAACACCCTAACCATTATGCAAACAC
GACACCACTAAATGTCTGTAGAAACTAATTTTTGAGAAATATAGAATTAG
CGATATGGAACAGATAGTTGTGGAGTAACTTTGAAAACAACATTGGAAGC
TACAAGTGACTCTTTTGCTGGACCTCTATACCCTCGTTGTAGTTGGTTGG
TTTGGTCTGAGTGCACCGCTTCATCCAATTCGCTGGCTGTTTCATTTTCT
TTAATTTTTTTATACAGGAGTCTAAGATTCAGGTTATCCCGAATCCTTCC
CAGGGTGCCATAGGAGGTCATGGGTCAGGGGAACCGAGTACCAAGGTCAC
CTCTGATGGAACAGGTGAAAACTTTAAACTTTTTCTTGTCATATTAAAAT
TAACTGACAGTAGTCAATCAGCTGTGTAACAACAAGCTTATGTTAGCTGT
CAGCTGATTTTTTTTCACCATGGATGAGGTTTTTTAACATCCGGAAGGTT
AATTTGTGTTATTTTTATGTAGCACACTTCTGTGAATTGTAAACAAGTTT
TATTTTGCTTGCTACATTAGGTAAAAGCAACCCTGAAAGAGGTCGGCCAG
AAACCAGAAGTGTGACAAATAATGGGACTTACATCCGATCTCCTAGCAAC
AATGCAGCCACACCTAGCAACAAGAGAGCCTCACCCGACGACACACCCAT
TTCAGAAAGCCATGACGACAAGGACATTCCGATGCCCCTGGCACTCACGG
CAGCCTATTGGTGGATCAACTTTGGATGGCTAACGTACCTCGACTACACC
TTGTACGCAAACGACAAGCAAAGCGCCGCCGACGCGCGCACGCAGGGTCT
TGTGATGTGCAAGTCTGTGAACGATGTAGAGAAGGCGTTAGGTTGTTGTG
GTCTTGTAGCCGTGTCCGAGATGATGGGGGAGTGGTGGCAGGAGGTGGGG
TGGGACCAGTTCAAGAGTTTCATGGAACATCAGTGAGAAAATAACAGTGC
TGTCACCAGAATGGCAACAGATTTGTATTTTGTTATGGGCTTAGAAAGCA
GGGAAAAGGTTAAAACAGCAAAGAAAAAAGCCGTAAATTATGTTAAATTG
TGTTACTATCTATTGATGGCAGTGCCAAAAATGTTTTTCCTTGCTAATCA
GAAACATGGGATCAGTTCTAGAGTTTCATGGAACATCAGTAGGAAAACAT
CTGTGCTGGGTTAAAACTGCTTAAAGTATACACAGCTTAAAGTATACACT
TGTCAATAAATAAATAAAAGTATACTCCATCACAAAGAATTTAAGCTATT
AAATCATTTTGTGTTATTGTTCATCAAAGTGCCAACTTTAAAGTATACTC
CATCACATGGAAAGCTATTATGTCATATTGTGTTATTGTTACCAAAGCGC
CAACTTAAAGTATATTCCAACACATAGAAAGCTATTACATCATTTTGTGT
TATTGTTTAGCAAAATGCCAGTGAAAGGAAATTTTTTCTATCCTTCACAA
AGGGCAATGGTTTGTGACGTCACAGAAAGGCTAGTATGGCTAGAGTCATT
TCTGTGGCGTCAAAACCTGTTGCTAATTTGTCCCACCAAATAGCTGTGAC
AGTAGACAATAATACATGTACATGTATTGCATATTAGATGTTTTCAGAAA
AGGCCAATTTTTTTGATGATATTGGCATTTATCTCAGTTGATGGCAATGC
CCAAAATATTTTACACTGCTGATTAGAAACAGCTTTGGTGGCAAGAAGTG
TGATGGAATCAGTTCGAGGGTTTCATGGAACATCAGAGAGAAAATGACGG
TGTTGGGTTAACCTTGAGCATGCTAAGGTAGCTATTTGGCACCAGATTTG
TATTTGTTATGGGCGTAGGCAGCAGGGAGAAGGTTAAAACAGCATAAAGA
AGCCCACCAGATAGAAAAGGCTATCAGTTTGTGTTACTATATAAATGTAT
TGATGGCAGTGCTCAAAATGTGTTGCTTTGTTGATTAGAAAAAGTTTTGA
CTTGTTTGAAATCTTATGACTGCAATCAGAAAGCAAAAGCAGAAGTAAAC
ATTTTTTTCCTCAAAGTTTAAGGTCATTTTTTTGGAAATGCTGCACAAAA
CCTACTCTGATTTGTGTTGTAAGATTTGTATGATGGCCTTGTGAAGATGA
CGGATGTATTGAATATTTTTGTATAATTTGAGCTGCAAAGAAAAGTTATA
AGGAAGAACAGTTGTCAAGGCTTGTTATATCACTTATCAAAGGAAAAAAA
AAGGAAAACAGTATTGAAAATTGGTGAATGCAATGTTCTGTTTTGTTGTA
ATATCATAAACATACAGTTTGTTAATATATTATACATATATGCAAGATCC
TCGTGTTAAAAATAAAGAGAAATGTTTTAATTTACAACA Coding sequence (CDS) from alignment at Sc0000003:5580355..5586343+ >Blg00821.0 ID=Blg00821.0|Name=Blg00821.0|organism=Branchiostoma lanceolatum|type=CDS|length=891bp|location=Sequence derived from alignment at Sc0000003:5580355..5586343+ (Branchiostoma lanceolatum)
ATGCGCGATCTAGCCAAGGAGAGGGGCAGGAAAGCCCGTAGCAGGAGCAG
AAGCGTGTGCAGGGCAAAGGCGGTTGGGGCCGAGGGGAGAGAACACGCAC
CGAGGCGCGCCGAGAAACAGGCGGGAGAGGACGTTCAGGACACCGCCAAC
GAACACAACATCTGCTGCTCACCTAAGGGCTGTCGTCATGACAACAGCAA
GGAAGTGACGGACTTGGCTTCTGCAGTGAAAGTTGTGTGCTCCTTCAAGA
CTTGTAAGGAAGGTGTCTTCATGCACGAGGACTGCTTCTTGGCTTGGGAG
GACGACATCATCAAGAACCTGCAGAGTCACTTTCGTCCCCAGCAGCTTGG
CCGGCTGCAGTCCTGGTCGGTGCAGCAGCTGCGGAGAGACCTGTGGACCA
GGCGGGTCAACGACGTCACCTACAAGATCTGCATCTGCAGGTGCGGGGGG
TACCTGAAGAAGGATGAGGACTGGAGCGCTGAGAAGGATGCAGAGAAACT
ACGACATGACGCTGATGATGTAGCAGATAAGAAGAAGAAGAAGAAGAAAG
GAGACAAGCCGGGTATTCTCTGGGCCAAGAAGTCATGTCACAAGTTCACA
GACATTGCCTCGACAAAACCATTTAAGAAGAATGCTATGAAGACAAGATA
CCTGATGGAGTCTAAGATTCAGGTTATCCCGAATCCTTCCCAGGGTGCCA
TAGGAGGTCATGGGTCAGGGGAACCGAGTACCAAGGTCACCTCTGATGGA
ACAGCAACAATGCAGCCACACCTAGCAACAAGAGAGCCTCACCCGACGAC
ACACCCATTTCAGAAAGCCATGACGACAAGGACATTCCGATGCCCCTGGC
ACTCACGGCAGCCTATTGGTGGATCAACTTTGGATGGCTAA
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg00821.0-exon-Sc0000003-1570713199:5580355..5580694 | Blg00821.0-exon-Sc0000003-1570713199:5580355..5580694 | Branchiostoma lanceolatum | exon |
| Blg00821.0-exon-Sc0000003-1570713199:5581213..5581359 | Blg00821.0-exon-Sc0000003-1570713199:5581213..5581359 | Branchiostoma lanceolatum | exon |
| Blg00821.0-exon-Sc0000003-1570713199:5582045..5582146 | Blg00821.0-exon-Sc0000003-1570713199:5582045..5582146 | Branchiostoma lanceolatum | exon |
| Blg00821.0-exon-Sc0000003-1570713199:5582561..5582637 | Blg00821.0-exon-Sc0000003-1570713199:5582561..5582637 | Branchiostoma lanceolatum | exon |
| Blg00821.0-exon-Sc0000003-1570713199:5583286..5583439 | Blg00821.0-exon-Sc0000003-1570713199:5583286..5583439 | Branchiostoma lanceolatum | exon |
| Blg00821.0-exon-Sc0000003-1570713199:5584222..5584318 | Blg00821.0-exon-Sc0000003-1570713199:5584222..5584318 | Branchiostoma lanceolatum | exon |
| Blg00821.0-exon-Sc0000003-1570713199:5584601..5586343 | Blg00821.0-exon-Sc0000003-1570713199:5584601..5586343 | Branchiostoma lanceolatum | exon |
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000003 | genome | Sc0000003:5580355..5586343 + |
Properties
| Property Name | Value |
|---|
| GeneID | Blg00821 |
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