Blg00791.0 (mRNA) - B. lanceolatum

Overview


Name	Blg00791.0
Unique Name	Blg00791.0
Type	mRNA
Organism	Branchiostoma lanceolatum (Amphioxus)

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Sequence

The following sequences are available for this feature:

mRNA from alignment at Sc0000003:8188976..8191671-
coding sequence from alignment at Sc0000003:8188976..8191671-

mRNA from alignment at Sc0000003:8188976..8191671-

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

>Blg00791.0 ID=Blg00791.0|Name=Blg00791.0|organism=Branchiostoma lanceolatum|type=mRNA|length=2696bp|location=Sequence derived from alignment at Sc0000003:8188976..8191671- (Branchiostoma lanceolatum)
ATGCCTGCTAAACCGCCTCATGGCGTATCACACCAGGTTTGTACTGACGA
GTACAAACTGCATATCCTGACAGATTTAGTTTGATCCACTCCCATCGGGA
AGGTCCTCTACTCATTTTGATAAGTGTGGTGGGTTCTTTAACGTACTTGA
GGTGTGGCTCTACTCACTTCGACACCTCCATTTAACGGCCCAGGGATGTT
CTGAACTCAATCTAGGAACTAGGGTGAAGTGAGAAAAGTCGTGTTTTAAC
TTAAAAGTGACTACTTCCAACCCTTCTTCTGTTTGGAGATTACTGTGTGC
AGTACTATATGGCTTTGCAATAGTTATGCATGTTTAGTCAAAATATTGTG
TTGTGACAAATGTATTGTTCAGGAGTAGACTAGTAGAAGTAATGAAATAC
TTTATGTCTTATACAATTGTTGAGCAAAAAAGACATACATATAACATAGG
CACTAAAGTAAACTCAGCATTTCCTTTTGCCTACACCTTCCAGGTGCAGC
ATGTTGCACCTGGCCAGGTGGACCATTCAGGCCCAGTTCCCAATGACCAC
CTGAAGTTTGCTATCATCACCACCATCTGCTGTTTCTGGCCGACCGGGAT
CTTGGCCATTCTCAAGGCAGTGGAGGTGGGTTTTTGGCAACGGCTCAAGG
ATAGAGCCATTTCATGTATACATTTTTTTTTTCATTCATGATCAAGTTGG
TTATTTCTTTACATTAGAAAGTACCGAATAAAATATCAGGTTTCTGTAAG
TAAAGAGAGTCAATGACTATGTGGCCATATTCATGTCCAGTTAACTAGCT
TTTCATATTTTCACCTCAAAGTATTTTAGAGTATTTCAAGTAATTGAAGT
ACATGTAAATTACAAATTCTATCTCTACCCATGCAGCATAAGCAGAAGAT
TTGCTCTATTAAAACTGATTAATTTTTTGCATTCTTGTACATTTCCAAGA
TATGTAGAGGAATTCAGAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCTGCCTGGCTTTCTTTA
TCTACATGTAGTTTGTTGTTTCCCTCCTTAGACCCGTGAGCTGATCGCCC
ATGGGGACATTGCCCGCGCAAACGAGTCCTCCCGCAAGGCAAGGATGTTC
TCCATCCTTGCCCTGTGCATTGGACTGTTCCTATTCTTCGGGATCATCGT
TTACGGTACCATCATGGTCATACTTAACCAAGTGGCACGTCATTGA

Coding sequence (CDS) from alignment at Sc0000003:8188976..8191671-

>Blg00791.0 ID=Blg00791.0|Name=Blg00791.0|organism=Branchiostoma lanceolatum|type=CDS|length=333bp|location=Sequence derived from alignment at Sc0000003:8188976..8191671- (Branchiostoma lanceolatum)
ATGCCTGCTAAACCGCCTCATGGCGTATCACACCAGGTGCAGCATGTTGC
ACCTGGCCAGGTGGACCATTCAGGCCCAGTTCCCAATGACCACCTGAAGT
TTGCTATCATCACCACCATCTGCTGTTTCTGGCCGACCGGGATCTTGGCC
ATTCTCAAGGCAGTGGAGACCCGTGAGCTGATCGCCCATGGGGACATTGC
CCGCGCAAACGAGTCCTCCCGCAAGGCAAGGATGTTCTCCATCCTTGCCC
TGTGCATTGGACTGTTCCTATTCTTCGGGATCATCGTTTACGGTACCATC
ATGGTCATACTTAACCAAGTGGCACGTCATTGA

Gene-mRNA-Prot

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
Blg00791.0	Blg00791.0-protein	Branchiostoma lanceolatum	polypeptide

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
Blg00791.0-exon-Sc0000003-1570713199:8191636..8191671	Blg00791.0-exon-Sc0000003-1570713199:8191636..8191671	Branchiostoma lanceolatum	exon
Blg00791.0-exon-Sc0000003-1570713199:8191047..8191178	Blg00791.0-exon-Sc0000003-1570713199:8191047..8191178	Branchiostoma lanceolatum	exon
Blg00791.0-exon-Sc0000003-1570713199:8188976..8189140	Blg00791.0-exon-Sc0000003-1570713199:8188976..8189140	Branchiostoma lanceolatum	exon

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Sc0000003	genome	Sc0000003:8188976..8191671 -

Properties


Property Name	Value
GeneID	Blg00791

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Blg00791.0 (mRNA) - B. lanceolatum