Blg00771.0 (mRNA) - B. lanceolatum

Overview
NameBlg00771.0
Unique NameBlg00771.0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000003:4090029..4092720-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg00771.0 ID=Blg00771.0|Name=Blg00771.0|organism=Branchiostoma lanceolatum|type=mRNA|length=2692bp|location=Sequence derived from alignment at Sc0000003:4090029..4092720- (Branchiostoma lanceolatum)
ATGCNAAAAGAAGCGGAATGCCTGTTGGGAATTGGCCACGTCTACGTCCA GCGAGGCAAAAGGACAAAAGAAGGTAGGAAATTCACACAGGCAGCAGCCC TGTACAATGCAGCCATGGCCAGAACAGAAGTAGGAAAAGACAAAGTTATG AAGTACTTACAGGAAACAGAGCAGTTGTTTCTGAAGCACATAGTCAGAAA TGTGGACAGCAAGCCAAGTTCATCTAATGGGGACATACGTCATAAAGAGC GATTGGAGCGCATGCGCACCCGCGTCAAGTCTCAGTTAGAAGCCATTGAT CAGAAACACAATCCGTATCAATATGACGAGGACGACCCAAAGATGAGAGC AGTCGAAGCCAAACGAGCTGAAGCAGTCAAAGCTTTATTCAAGAGCATCG CCGAGGACAGACAAATGTTTATCCAAGACCTTGTCAGCGAATGCATAGAG GTTCTCGATCCTCCTCCATGTAAGTACGCTTTCATCGGGTTAGGTTCACA GGCAACAGAACTGGTCACACCCTACTCTGACCTGGAGTTCGCCATTCTGA TTGAAGAAGGCAGAGACAACGATGAAACTCGAGAGTACTTCATCAACCTC ACACACTACCTTCACTTGAAAGTCATCAACCTGGGAGAGACAATCCTCCC AGCCATGGCCATCCCGTCGCTGAACGACTTTCAATCAGAAGACCCAGAGA AGGACTGGTTTGTCGACTTCGTCACGCCTCGTGGATTTGCCTTTGATGGC TTTATGCCTTGGGCTAGCAAGACTCCTTTTGGAAGAGACCAGACTAAGGA TAAACCTCCCGTAAGCCTTATCCAGACTCCTGCCAATCTGGTGAAGTTTC AACCACTAGATGTTTCTCTGGCTGAAGGGTACCACCTGTCAGACATCCTT AGACGTGTTTCTTTCCTTGCAGGAGAAGAAACCCTGTTAAGTGAGTATAT GGCAAAACTGAGAGAAATGATCACAGGTGATCTTCTTTCCCGTTTTGAAT CCCGTATATCAGCTGTTAGAACCATGTTCGACGACTGGAACCATTTCTGC ACCCTTGAACCCACTGGGCAACTGCTGAATGTAAAAAGAGACATCTATCG TTTCCCAGGCATAGCCATTGAACTACTGGCCCTTTGCTGTCACATAACGG CTGCTAGCACATGGCATGTAATCGACCAATTCAAAGAAATGGACCTTATC CAAGACGAAAATGCAACACATCTTTCCATACTGACCAGTATCTCCGCAGA GCTTCGGTTGAGGACGTACATTGCCAATGGAGGGCAGAAAGACACTATGT CCCCTCTCATCGAAATGAAGTATCAACCAAGCGAGCAAAAGGCGCCTGAC ACCACCTTGAGGTCTGCATTCCACATTCCAGACACGAAAGTCCTTTTCCG ATACTACTGCAGGGCTATCCCCTTAAAGAAGTGTTTACCAGAAATGATCA AACATAGTTTGCCGATCAAACCTATTAAGATATTCAATACAACCATCTTT GATGACTCCAATGAATGCATAGGTCGGATAGCTCAGTCCCTGCTATTGAG AGATAAATGTATACACCACTGGGAAGCCGCATTAAAGGAAGCTGGCAGCC ACATGGTCAAACGTTCGAAAATACTGTGCGAATTGGGGGTATACTGGGTA AACAATGATGATATTGAAAAAGCAAGACTCTACTTTGAACAGTCTCTTGG TATCCGTAGAAGCATCTACGGAGAACACACGGCGCATCCGGACATTGCCT TCACATTGGCATGTCTAGGATTATCTTGGAGTAAACTCGGCGATGAGAAG AAAGCAATTCACTACTACGAACAGTCACTGGCCATGGCCACAGCATTCTT TGGAGACAACACTGCTTCTCCAGACATTGCCGTGACTCTTAATGTCCTGG GATCATCTTGGAGTAAGCTTGCTGATCAGAAGAAAGCAATTAGTTACTAC GATCAGTCACTAAAGATGACGAAATCCATCTATGGAGACAACACAGCTAA CCCGGACATTGCCGCGTTACTTCACAGCCTAGGAACCTGTTGGTGTCAAC TTGGCGATGAAAAGAAAGCCATCAGCTACTACGAACAGTCATTGACAATG ACAAAAACTTTTTATGGCGATAAAAGCGCACATTCACATATTGCCGCGTC CCTTCACTGTCTGGGAATGTCTTGGAGTAATCTCGGTGATTTTACGAGAG CAATGCATTTCTTCTATCAGTCACTGGCAATGACAAAAACTATCTACGGA GAAAACGGGACCCATCCAAACATAGCTGCGATACTGCAATGCCTTGGACT GTTTTGGAGTAAACTTGGCGATCAGAGAAAAGCAATTGACTACTATCATC AGTCACTAACGATGCAAGGGTCTATCTATGGGGACAATACAGCTCATCCA GACATGGCCGGAACACTGAACTGTCTGGGATCATCTTGGAGTAGACTTGG TGATAACAAAAAAGCAATTAGTTACTTCGAACAGGCCCTTACGATGGCGA AAACTATCCATGGAGAAAACATGGCACATCCAGACATTGCAATGCCACTC CAGAACCTGGGATCATCTTGGGGTGAACTTGGCGATGACAAAAAGTCAAT TAGTTACTACGAACAGTCACTGGCGATAAGCAAAACTGTTTATGGTGAGA ATGCAGCCCATCCAGACATTGGCAATTCACTTGCAGGCCTAG

Coding sequence (CDS) from alignment at Sc0000003:4090029..4092720-

>Blg00771.0 ID=Blg00771.0|Name=Blg00771.0|organism=Branchiostoma lanceolatum|type=CDS|length=1242bp|location=Sequence derived from alignment at Sc0000003:4090029..4092720- (Branchiostoma lanceolatum)
ATGCNAAAAGAAGCGGAATGCCTGTTGGGAATTGGCCACGTCTACGTCCA
GCGAGGCAAAAGGACAAAAGAAGGTAGGAAATTCACACAGGCAGCAGCCC
TGTACAATGCAGCCATGGCCAGAACAGAAGTAGGAAAAGACAAAGTTATG
AAGTACTTACAGGAAACAGAGCAGTTGTTTCTGAAGCACATAGTCAGAAA
TGTGGACAGCAAGCCAAGTTCATCTAATGGGGACATACGTCATAAAGAGC
GATTGGAGCGCATGCGCACCCGCGTCAAGTCTCAGTTAGAAGCCATTGAT
CAGAAACACAATCCGTATCAATATGACGAGGACGACCCAAAGATGAGAGC
AGTCGAAGCCAAACGAGCTGAAGCAGTCAAAGCTTTATTCAAGAGCATCG
CCGAGGACAGACAAATGTTTATCCAAGACCTTGTCAGCGAATGCATAGAG
GTTCTCGATCCTCCTCCATGTAAGTACGCTTTCATCGGGTTAGGTTCACA
GGCAACAGAACTGGTCACACCCTACTCTGACCTGGAGTTCGCCATTCTGA
TTGAAGAAGGCAGAGACAACGATGAAACTCGAGAGTACTTCATCAACCTC
ACACACTACCTTCACTTGAAAGTCATCAACCTGGGAGAGACAATCCTCCC
AGCCATGGCCATCCCGTCGCTGAACGACTTTCAATCAGAAGACCCAGAGA
AGGACTGGTTTGTCGACTTCGTCACGCCTCGTGGATTTGCCTTTGATGGC
TTTATGCCTTGGGCTAGCAAGACTCCTTTTGGAAGAGACCAGACTAAGGA
TAAACCTCCCGTAAGCCTTATCCAGACTCCTGCCAATCTGGTGAAGTTTC
AACCACTAGATGTTTCTCTGGCTGAAGGGTACCACCTGTCAGACATCCTT
AGACGTGTTTCTTTCCTTGCAGGAGAAGAAACCCTGTTAAAGCTTCGGTT
GAGGACGTACATTGCCAATGGAGGGCAGAAAGACACTATGTCCCCTCTCA
TCGAAATGAAGTATCAACCAAGCGAGCAAAAGGCGCCTGACACCACCTTG
AGAAGCATCTACGGAGAACACACGGCGCATCCGGACATTGCCTTCACATT
GGCATGTCTAGGATTATCTTGGAGTAAACTCGGCGATGAGAAGAAAGCAA
TTCACTACTACGAACAGTCACTGGCCATGGCCACAGCATTCTTTGGAGAC
AACACTGCTTCTCCAGACATTGCCGTGACTCTTAATGCCTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg00771.0Blg00771.0-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg00771.0-exon-Sc0000003-1570713199:4091781..4092720Blg00771.0-exon-Sc0000003-1570713199:4091781..4092720Branchiostoma lanceolatumexon
Blg00771.0-exon-Sc0000003-1570713199:4091360..4091471Blg00771.0-exon-Sc0000003-1570713199:4091360..4091471Branchiostoma lanceolatumexon
Blg00771.0-exon-Sc0000003-1570713199:4090828..4091011Blg00771.0-exon-Sc0000003-1570713199:4090828..4091011Branchiostoma lanceolatumexon
Blg00771.0-exon-Sc0000003-1570713199:4090029..4090034Blg00771.0-exon-Sc0000003-1570713199:4090029..4090034Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000003genomeSc0000003:4090029..4092720 -
Properties
Property NameValue
GeneIDBlg00771