|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000003:5197121..5200850+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg00727.2 ID=Blg00727.2|Name=Blg00727.2|organism=Branchiostoma lanceolatum|type=mRNA|length=3730bp|location=Sequence derived from alignment at Sc0000003:5197121..5200850+ (Branchiostoma lanceolatum)
AGGAAAGGATACGAAGGTGCATGGGAATATTGGACTCTTACTTGGTGGCA
TGCCGAATCCTGCGTTCATAAAATTAACAGACAGCTTATTACGTCATTGT
CCTGTTCCATACAAGTCGTCCTCCAGGTCATCGACACCACTTCATCAGTG
CAGCTGAGGGTAACTAGCAAACAGTACGTGTGCTTCTGACAACAGTCTTA
CAACTGATACCTATCGACCTGCCAGCTTGGATTTTACATAAAGACGCTGT
GCCACAGTCCACAGAGTTTTGAGCTGAGCCACGTCAGCTTTGCGTAAGGT
CGACTCAGAGACCACAACACCAGCCAAGAGCGATGGACGAAAGAAACAAC
GTGGCTTCTAGTTCTATAGACAAGTATCTCAAAAGACCAAGGAAACAGGT
ATCCAGCACTATAGTTGGTCCTCTATGGTCTATACTGTCGGGGATCTTGT
CAGCTCTATCGGCCACGTTGCTACAACTTGCCGCTGGAGTCCCCCTCTTC
CACACGATCGTGGTCCGATGCTCCGTCCAACTCTTGGCGGCGGTGGTCGT
GCTGTGGGCCCGAGGAGGATCCGACTTCGCCACGGTGAGAAGACGGACTC
TACCCTGGTTGGCGCTTCGTGGTCTTGTGGCTTTTCTAGCATTCTGTACC
AATGACTACGCCAGCACTACTCTACCTCTAGGTAAGAGGATCATACGTTA
CGTTCGGAATTGGGATAATATTTGCCTTCCGGTTTGTTTGCGAAATCCGC
CATGTTGGAACGTCCCCTATCTAACGTTAGCGCCCCCATACGATCGGTAG
TAGAAAGACAACACTTTTGAAAAAAGAGTCATTCGCGTCCGTGTGGTGTA
GTGGTTTGTGCTACTCGCAACGTGTCGGCGGCCTGGGTTCCCGTCTGGAA
AAAAGGAAACAGACTAGGCATCTAGACACGACTGTAAAAGAGTTGCATCA
TCCTTTCGGATGGGCCGTAAGGGGGGCGACAGCTAGAAAAAAAAAAAAAA
AAACTTACAAAATAGAAACATCTTAAAAGCCGCGTTACAAAACAAGCCTA
ACCTCTGCTTGGAGAGTAGATATTTTCACCACCTAACGTTACCATCCTAT
TGTCTTAATATGTTATTATCATCATTATTACGTCTGTTCTTTTATATCTA
CTATAACCGCGAAAAGCGAGGAGAAGTAGAATTTATCTAATGATAGTCAT
ATTCTTTTATATTCGTTAACTGTACTTGTATTTTGTTTTGTTGTGACCTG
TACTTAGCCAAGTGTGGCAGAAATGTGCAATACAGGTCTTCATTCATTAA
TTTATCTTTATTTACTGCAGGAGAAGCCATTGCGATCCGCCAGACCAGTC
CGATCTTCACAGCTTTCCTGGGCTTCCTGTTTTTCGGCGAACCCGTCGGC
GGTCTCGAGATCTTAGTCGCCGGCATGTGCTGGCTAGGAGTAACCCTAAT
CTCAAGTTCGCAAGCCGCAGATTCGCACGATGACCTTGACCCTGCCGTTC
CGACGAAAACTCTCGGGGTCACGGTAGCGATGGTCGGAGCCATGAGTGCA
GCCTTGGCTTTCCTGGTGGTTGGGAGGCTATCCAGGAAGGACAAGGTCTC
GACGAATATTTTGGTGTTCGTCCGTTGCCTAGTGACGACGATCTTGTCTG
CTGGGTCGAACGTGTTCTTTCTTGGCGGGATGGGTGACGTCATGAATATG
AGTGGATCAAACGTCATATTGCTGGTGACGTCAGCACTGTGTGGTAGGTT
TTGACTTCAATGTATGTATTATATGTCCTATTCAATTTTAGTCTCAGTTT
CCAACTTTATTTGCTATCTGATCATGAGTGAAACGAATATTAGAAGAAAT
AGATGGAAACTCTAGGAAACAAAAGATGCACAATGAAAGCCATTCTTTGT
TTTACCAATCTGTTTAGATACGTTTGGTACCTTGATTTTTGGGGATTTTT
TTCTCTCAATGAAATTTATATCATTTGCATTAACACATGTACTTTTACCT
ACGTAACGTATGCCTATGTCTCTGCATTTGCGAATGACCACTCTTTCGCT
ATAAAAACCGTACACCCCTTAAAAAACTTGCTTCAGATAAATGTCGTTGT
TATCAAAGATTTCTTTTGATTTAAAGGTTACGACGTTTTTTTTTTCTGTT
TCAGATTTGGGCAGTAACTTCTCCTTGACCAAAGGCCTGTCCCTGTCTAA
AGTGGCTTCACACTCCATCATTCTCCGGAACTCCAATGTTCTGGTTTCTT
TTCTGATCCAGGTACGTCTTTAAAAAGTTCGTGTTTTTTTTAATGAATCC
CACACCAACTGGTGTATAGGGCAGCGCACATCTCCGTTTTTGTTGCCCTT
GGGCCACACCGTTGTTCAAGTACTGAACCATTTTGTCTCAATCTTCTGCA
AAGCAATTCTAAACGTTCCCATTTTCTGAAGTCATACTTTACGGAATAGC
CAGTCAACTCTGGGGGGGGGGGCGTCTAACGAGCAAGTGAATTAAAATGT
GAGTTATTTGTCACGTCCTTACTGTAAATTCCCTTCTTTTCAGATCGTCG
TTTTCAGTGATTTCCCGTCAGTCCAGAGTCTTGCAGGAGCGGCTGTTATA
GTTATGTCCGGTGTGATCACGGCTGTCAAGAGCAGATGATGACAATTCAT
GTTTGGCCTTTCTTAGTACAGTTATAAGCGACATAATTAATACTTGGTGC
CTTGGTATTAGAAGCTCTCAGGATTGTGCGAGGTAAGATACTAATTATAG
GTGATACGTAGGTACGTAGGTAATACTCCCATTCCACTAGGACGGCGCTC
TCGCCGCGCGCTCTCTGCGACCTGAAATTTAACAGAGCGCTCAACGACTT
CCATAGATAAAGAACGAATATTTTTCACTTTGTGTGTTTGGTTTTCCGTC
TTACTTTTGCATTTTGCATGATATTCCAATTATGAAATCAAGGGTTACAC
AGATCCAGCTGAGGTCGCGGCGAGAACAATTCGTGTTAGGCCTTTCTTAG
TACAGTTGTAAGCAAGATATTAATTATGCACGTTGATGAAGGTTAGCCAT
CCAGGTAATAAGATGATAGTTACTCAAGCAACCGGATAAAAGGTAAAATT
GACGTTTCAGACAGCATCCGCTGTCTTTTATTATTCACTGACGAAAGATG
CTGTCTGAAATTTTCTATCCAGCTGCTTGAGTAACTGTTTTTGGTTTATA
ATTACAGGTATGCATTGGTGCCATGGAATTAGAATCTCTCAGGATTATGG
TTTAAGATACTAATAGATGATAGATGATTGCCGTAGACTTAGAACTGAAA
ACTGTATAAAATACAAAGGGAATGTCCCAGTAGGTATATCATGATATTTG
TTTGTCATGCATAGTGGCGTGATGTTTCCGCTTCTCTTCCAAATGATGTT
TGGCCATTATTTACGGTGGTAAAGTCATGATCAGCTCTTCTAACCCCATC
AGCATATTTAGATTATACACTGTAGGCACTACACGTTGTAAATGAGGACC
AATAGAAATATAGATGTTATAGATTAAATCCAGTTATAATATTATGTTAG
TAAATGATAGTGTTGGTAAGAACTTTTGGGAACTTATCCTTTTTGTTGAG
AATCATGAAGTTAATTTTCAATTTCTAATAAAGAATAAAGAATGAAGGTA
ATTTTTGACATGAAACCTTGTCCTTACTATACCTCTGGTCATTTTACTTA
CAACAATGCATATGGCTAGACAAATCCGAG Coding sequence (CDS) from alignment at Sc0000003:5197121..5200850+ >Blg00727.2 ID=Blg00727.2|Name=Blg00727.2|organism=Branchiostoma lanceolatum|type=CDS|length=975bp|location=Sequence derived from alignment at Sc0000003:5197121..5200850+ (Branchiostoma lanceolatum)
ATGGACGAAAGAAACAACGTGGCTTCTAGTTCTATAGACAAGTATCTCAA
AAGACCAAGGAAACAGGTATCCAGCACTATAGTTGGTCCTCTATGGTCTA
TACTGTCGGGGATCTTGTCAGCTCTATCGGCCACGTTGCTACAACTTGCC
GCTGGAGTCCCCCTCTTCCACACGATCGTGGTCCGATGCTCCGTCCAACT
CTTGGCGGCGGTGGTCGTGCTGTGGGCCCGAGGAGGATCCGACTTCGCCA
CGGTGAGAAGACGGACTCTACCCTGGTTGGCGCTTCGTGGTCTTGTGGCT
TTTCTAGCATTCTGTACCAATGACTACGCCAGCACTACTCTACCTCTAGG
AGAAGCCATTGCGATCCGCCAGACCAGTCCGATCTTCACAGCTTTCCTGG
GCTTCCTGTTTTTCGGCGAACCCGTCGGCGGTCTCGAGATCTTAGTCGCC
GGCATGTGCTGGCTAGGAGTAACCCTAATCTCAAGTTCGCAAGCCGCAGA
TTCGCACGATGACCTTGACCCTGCCGTTCCGACGAAAACTCTCGGGGTCA
CGGTAGCGATGGTCGGAGCCATGAGTGCAGCCTTGGCTTTCCTGGTGGTT
GGGAGGCTATCCAGGAAGGACAAGGTCTCGACGAATATTTTGGTGTTCGT
CCGTTGCCTAGTGACGACGATCTTGTCTGCTGGGTCGAACGTGTTCTTTC
TTGGCGGGATGGGTGACGTCATGAATATGAGTGGATCAAACGTCATATTG
CTGGTGACGTCAGCACTGTGTGATTTGGGCAGTAACTTCTCCTTGACCAA
AGGCCTGTCCCTGTCTAAAGTGGCTTCACACTCCATCATTCTCCGGAACT
CCAATGTTCTGGTTTCTTTTCTGATCCAGATCGTCGTTTTCAGTGATTTC
CCGTCAGTCCAGAGTCTTGCAGGAGCGGCTGTTATAGTTATGTCCGGTGT
GATCACGGCTGTCAAGAGCAGATGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg00727.2-exon-Sc0000003-1570713199:5197121..5197801 | Blg00727.2-exon-Sc0000003-1570713199:5197121..5197801 | Branchiostoma lanceolatum | exon |
| Blg00727.2-exon-Sc0000003-1570713199:5198441..5198863 | Blg00727.2-exon-Sc0000003-1570713199:5198441..5198863 | Branchiostoma lanceolatum | exon |
| Blg00727.2-exon-Sc0000003-1570713199:5199275..5199381 | Blg00727.2-exon-Sc0000003-1570713199:5199275..5199381 | Branchiostoma lanceolatum | exon |
| Blg00727.2-exon-Sc0000003-1570713199:5199664..5200850 | Blg00727.2-exon-Sc0000003-1570713199:5199664..5200850 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000003 | genome | Sc0000003:5197121..5200850 + |
Properties
| Property Name | Value |
|---|
| GeneID | Blg00727 |
|
