Blg00715.0 (mRNA) - B. lanceolatum

Overview
NameBlg00715.0
Unique NameBlg00715.0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000003:1868049..1875004-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg00715.0 ID=Blg00715.0|Name=Blg00715.0|organism=Branchiostoma lanceolatum|type=mRNA|length=6956bp|location=Sequence derived from alignment at Sc0000003:1868049..1875004- (Branchiostoma lanceolatum)
ATGAATCTATCCAGCGTGTACGTGCTCGCCAGCCTGGCCGTGGTGTGCCT GCTAGTCAAGGAGACGCAGGCTGAGTACTTGTGCGGATCCACCCTCGCCG ACGTGCTCTCCTTCGTCTGTGGGAACAGGGGATACAACTCGCAACCCAGA AGGTCCTTGGGCAAGAGAGCAAGTGAGTTCAAGTCTTTTTTTTATTTTAA ACGTTCGCCAGGAAAGTTATGTTTTAGTAGCGCTTGTATGTGGTTATCCC CCCCAACGACATGGAGGTCAATAGACTAGGTGGGTAGGTAGGTAGGTAGG TTTAACAGCATAATTCAAGTAGCTATGGGTGGATTGGTATGAAAATTTGG TATGTTGTTAGGTCTTGTTCTATCAAAGAAAGAAAGAGTTAGAATTTGGG CCGCCTGGCGGGTTTTATTGGAGCTGCAGCAGAAGTTCCGGTTCAAATAT GTCGTACTTTCGGAGAACCAAACATTGCAGCTTGCTATGTGAAAACAAAC AACAAACGTATAACAAAAAGATGAAAACTTTCCTTCCATTCCGTTAAGGT TGTTTGTTTATCTGTCGGAAAATGTTAGCAATGAAAAAGGTCGGATCGTG TTATTCGGACCAAGCGGCGATGGACCTGCTGCACTTGCCTATGATAATAA ACAAGCCGAGCTCAAGTTCCGGGGAAGGACTCCTGAAAATCCCCGAGCGG AGGAGAATAGCACAAGTTCCCGACCTGCCCCGCGGCCCTGCTGCCTACCC AGACTCCTTTGGGAGTTTCCTGTCCCATGGACACGAGCCAAGTGTGCTAC AGCCATCCCTGTCCTGTACGAACAATATGTTTTCCTTTTCGCCTCCACTC TGAAAGATTGCACCTTCGAGAGGAGAGCTTAGGCCAGGGTCTAAAAGACG GGTTCTAATTAATCGCCGGGAGTCGCGGAAAGCTTGGCGGTGAGCCCCTC GTACAAGGCCGCCCGGAAGTCGCGCTGCAGCCCCTGATGACGCTGTGGTA ATGAGGCGTGACGCCTCCACTCAAGGTGGTTCTGGGTACTTAGGTTTACC GTGGCCTTGATCAAGCAAACAGCGAAAGTCGCCTTGAATACTCCACTCCC CTTAATTAAAGGCACCTAGAGCATTTTATTGGGCTTGAAACTCGAATTTA AGAACATCAATTTCTGGTCATTTCTACACATAGTAAGAAACGCTATACCA TTACATATCGACATTGGCAAGGAGCAAAGAATATTTCCAGTTTTCAAGCC ACATAAAATGCTCCGGGTGCCTTTGAACCAGTTGGCTATGGCATGCCCTG TAAACCCGCGTTAAACAGCATGTAAACTTCATCATTCCGTACGTACTGAG CTCAATTTGTCCAAACGTTAACAAGCTGGCGGAAAACGAGGTAATCATAG GCACTAGTCGTTTCGCACAGTGAGACCGCACAGGCCTAGGTCGCTGATTC GGACAGTGAAAGCGTACAGGCCGCTGAGAAATGTGCTGGTGTACGTGGTG TTAAGTAGGTAGGACACCTGTCGAATGGCTGTTCTGTGTCCATGGATGGA GCAAATGACACAAACCAATGTGCTAACCTTCACGATACAATCTGATGCTG ATAAGAAGGGTTTGTTAGGCCACGCAGTCCATGTCAAATGTCATACCTGT ACCAATGACATGCCACTACTTTTAATCTCATTGGAGATTTCATTTCAATC ATGATGTCACAGATACTCCGGCCTTTAAACAGACGTCGAAAAACCATCCG GTAAAGACTTCAACCAAGAAGGCCAAAAGTTAATTTGTTTTGAAAGAAGT TGCTATAATATAAAAGATTTTATAATTCGGATCATCCAAGACTTAAGATT GGACTTACAACAGGTTCTGACTCAACTGCTCAAGTGAGGCCAAATCTAAC TAGTGTAATTACAAACGTTGAGACACACTTTAGATTCCGGTACAAATCCT CTAATCCTCCAAGTGCCGAGATCAAGTCTTCTGAATGCCCTATCACACTT GTAGGTAGCGCATTAACATTGGGGGGGGGGGAGTCAAGTTTGCGGGGAAG AGGTTGTTTCCTACTTTGACCCACAGTTGTGCAGCCTAGTTATCGAACCA AAGAAATTTACTCTTCGTCTGCAAACATAACCTAAACCAAAAACATGTCA ATACGTAACTTGCGGACTAGAATATACGCACAAGTGTGAAGTGTGCTTCA CACCGTAGATGACGAATGAGTTTAATCGTGACGCGACCCTGGCCCGGTTC TCCCGAGGCGACGCCGGAGGATGGCCAAGATCACTCCGACTTAAGATTCC GAACGGTTCCACCGTATCTGAGGAATGGAATGCCGAGCTGATAACTGAAC GAGTCTCGCGGGGCACCCCAGCTGACTAGAATGCCGCGAGAGTCAGCACA AAAACTGCTGTGCCCTTGGGAAAGACGCCTTACACGACTTTCCTAGCCTC TCTCCACCCAGGTGTAGACATGGGTTATTGTTCTCTGTACGTGGCCTTGT TGATATAAGTTATAACAGCTTTGGTGCAGTGCAACGTCGTCCTTTCCAGG CCAATAGCAGAATACATTTTCAAAAAGGAGAAAAAAAAAAAAAAAAAGGT TTGTTAGGTTGTGAAAAGAATGTCATCTTCAGCTGGCAACGTTTGCAAGA GGTTAGATGACGTAAATTGGATTTTTTTTGTAAAGCTAGGAGACAAACTG TGCATTTTTCTGTCGGAGTGCTGAACATAGTTCTGTATAGCCTTGATGCC AAACCCCCAATCTCTATGATATCCATCGTGTGAGTCTGCGTGTGTGAGGT TCTGAAAAGAATGTCATCCCCAATTGGCAATGTTTGCAATAGGTTAGATG ACGTAAAAAGGATTTTCGTTAATAAGGCTAGGAGACAAAATGTGCATTTT TTCTGTCAGAGTGCTGAACATCGTTCTGTATAGCCTTGATGCCAGATCCC CAGTCTCTATAATATCCATCGTGTGGGTTAACGCTCTGTGAAGCTTTGCC ATTTGGCGGTCGGTGAGCAGGCGGCGTCAATCCATCAGCTCCTCCCGGCA CTTCAGTGGGGATGTTTAGAACTGTGCCGTACAACGACTGGTAGGGATTA GCAGTTATAGTCAGACGTGCCGGAGTGTAGATACGAGTATCAGAGGTAGG TCCTGACAAGCTCCATAAACATTTAAGGTCGGCTGGGAGTGTTTCCAGCA TCTTTTTCCCTCCACATGATCTGTTGGAGTTCCCGAAATAGCTTCCCTGG CCTTTTTTAGTACCGAAAATCATAACAAACGTTTGACCAGTAGATTCTAA ATCAAGAAAAAATGCCACAATCCGACGCGTGTTGTCTCTCGCTTCGCTGC CAGTGTGCTCACCCGACCGCATCGTCCCCGTACCCGTGAACTTGACATTT GCAGGCACATGGGAGACCATGTGGGGGCCTCGCTGTTTAGAATGGATAGA AGCCACGTGGAGAGAGAGCGGGGTTTATGATAAATCATGGCGAATGGAGA CAGGTTTGACAGGAGTTTGAACACTCGCAGCGGGCCGAGACGGAAGCTGG GCCGGCCTCGCCTGGCACTCTGTCATAAAGGATGAAAACTTACATAACTG AACCACCAGGCAATAAGAGGACATCGACCTACAACCTAAAGAGGGAAAAT AAGTCCAAAATACTGCTTCAAACCCACAGTGAACCTACTGCGTACGTGGA AAAACTAAAAACAAAAGTTCGACTCTTCTGACGCCAACGATGTTGTGCCA TTAGAAAGGCACTTTACATTACTTTCCGTACTCCACCCAGGTGTAAAAAT GGGTATATTGTTTTCTGTACGTTGCACGGTTAAACAAACGTTATGAAAAA CTTGGGTGCAATGCCACGTCGTCCTTGTCTGTCAAAAAGCAAAGTAGAAA GAAAAACACGGTGGAAGAAACCGCCGTCCGTGCGCTCTGGTCGGGCGCGT GCCACCAGGCTGCGCGTTAAGCGGTTTCACAGTCGAGTTGATCTCCCCGT GTTTCATGTCAAGCGTGATGTATAGATGCAAAGATCCACACTCATAACAA CGTCTCCGAAATGTGTCACATCGGGACAAACGTGTTGAGTTTGATTATTT AGACCAAATTGTCCCCGCCAGCTCCCTTGTAGCCAGTTATTATGACTTGA GTTAAGTCTTTAAGCACGTCTTGAGTATGTTTTTTCGGAAACAACTAGAT TTGAGATACTAACTGATGTTTTTTTTTAAGGGATTTGCATTGTAGTGTAC TTCTCAAGTTGACGTGAGTCCTAGAAAAATGGTGCATAGATTACGCAACC CTTGTCTTATCGTCTTGGCGATAGACCTAAGACGCGTAATACCAGGAAGA TGTTAACTCCCGGCATGTCTTAAGATCTAACGCAAGACATAGCCAAGGTC ACGACCGCGACTTCATCCGCGTCTTAGGGATCCGTAAGATTTACTTCTAC CTGTCCACCTTTAGACCCCGTCTGGGTTTAATGCCTTGTCTGGATCAGAT CTAAGACTAAACGCAACTTGCTGCCGGGTTTCAGACTGCGGGCAGAACAA AAACGTACTGCGAGTAAAGATGTAGATAGATAGCTTTAAACAACACTTGC AGTTAGATGTGCAAAAGTAAGGTGTTGCAGATCGTACGGTGTAATATGAC CAGCTATTGCAGCGCCGCGTGCCTGAGACGCTGGTGTGTTACGCTGAAGG GCGGTTATACCGGCTATATAGATAAAATGTGCAAGTGCAAAATGCATTAA GAGCTATCATAGTAAGTCCAACAAATTGAATGCTTCAATACTTTGATTAC CGTTTGCTATCAGAACACGGAGCTAAATAACCATTCCCGCGTTTGTAGGA TGAACTACAACTGTTACAGTTCAGTAGTTCATCCATGCATTTATGCATTC ATTCAGATCATTCATTCATTCACTCATTCGTCATTTCATTCATTCATTAT CGGTATTAGACCACGCACTTAGCTAACGCTTCTCTCGTCTCTCTGTGTTT CAGTTGACTTCATCTCGGAACAAGAAGCCAAGGACTACATGGGCGCCATG CCTCACATCCGGCGCCGCCGAGGCCTGGTGGAGGAGTGCTGCTACAACGT GTGCGACTACAGCCAATTGGAGAGCTACTGCAACCCGTACACCACCGCTC CCGCCACCGCCACGCCCGTCAGAACAGCTCCGCCCGAAGAGCAAGAAGAA GAACAGCAAGACGAGGACGCCGCCCCTCTGGACGGCATGGTAGGCGACCA AGCTCCCCTCGGATCTATCGAGAACATAGAAAACTTGGTCTATCATTACG ACAGGGACGACATCACGGTAGACGCGGCGAAAAAGGAGCCGAAGAAACTT AAGGAAATCCTCGGCTCCTTCGAAGATAAGAAGGCAAACCCCGTCTTTCC GTTCATCAGACAATCCAAGAACGTAAAACCGAACAAGGTAAGAACTGAAG CGTGTGTGAACAGATTTACTGTAACGATATGNAGCGTATGTGAAAAGCTT TACTGTAACGATATGTAGAAGTATGAAAACACTGAATGTACTGACTCAAA AACGATGGAGGGGAGAATGCATGGTTTAGGGCAGGACTCAAAATGAAAGG AAATCGTCTACCAGTTTCCTACTTACAGTTGCCAAATGTCTGACTACAAA AAAATGACTCAATTCCCAGTATAGAAACACCGTGTCAAAAATTATGCAGG GGAGGCCGGTTAGGGTAGGATTCAAAATGAAAGATAATTGTCCACAAGTT TCCTACTTAAAGGTGCCGAGTTTTTGACTACAAAAGAAGTGACTCAGTTC GCCCTCGTTGTGTGTGTTATCTGGAACGTTGGCAATGTGTAGGATTAGTA GCCTTGTTGAGAGCTGCCCGGTGTTGGTGTAAAGTCTGTTTGTCCCATCA GTGCTGTGGCACGCTCCTCTAACGACCCTGCCAGCCAGTGTTTACTCTAG CACGCGGCGAACCGAGCGGTTCTACATCTGTAGGGCACCATCAGGACATC TTAACACAAACTCAGCAGCAACGCTAACTCGTAACGCAGATCACAACCAT GTCTTTATCGTGCTTAATCACCAGGACTTTAGCACGGGGTCAGACAGGAT CTGATGATGATGTAAAAGTGATGAGGTCTGCTTTTTTACAAACGTTGCCC TCTCGGCTCGGGGTTTGGGGAACTGGTAGAAGATTTTATCTAATACATCA TCAGTATTGGAAAGAGATCTTTGGCTATTACATTTTATCTCAAACTGCCC CTTTAATGATCAGCAAAGAAAAGAGCTATCTAAAGAAGCCACCAAAACTT GTCACAATTCCCAAACGTTTACTGACGAAAAGAAAACTAGAACCCTGTTT AAGCCTCTCAAACCCCACTCATTGCTGAAAGAATGGGACTGCTTTCAAAA AAGATGTCAAACGCAAAAAGCTTAGATTGTATTCCGTAGCAGTTCTTAGA ATAGCCTCTTGTCCCCATCGTTAACTTGCACTGTCTGTATACTTTTTCTA TCCATTGTTTCATGTTGCAATTAGGGCAAGAACTTGCAAGATAAAATAAA CTATAATCACAATAGACAGCTTCCATTGTAAGACATTTTTGTGTAGATCC TACTCGTATTCTGAGCTAATGAGTCGTTTTTTTTCCAGTTTCCTGACTCA TCCGCCCACCAATACCCGACCGACCTCGTAGAAGAAGGACCAACCAACGA GATTCCGGAATCGCCTTCCCAGAAGCCCACACTGGAGCGCCTCGGATACA AGGACAACCAAACGGACAAGAAAGAACCAGCAGAAAACAACAACAACAAC AACAGAGCCAGAGACAATAGAACCAAATCCTCCACAGTCGAACCACACAC TGTGCCAGACTACATATCAAAACAGTACACACACAAACCCCTCATCACGT TGCCGCGGGGCACGCCCAGAAGAATAGAATCCCCTGGACAGCTATCACTC AACTGA

Coding sequence (CDS) from alignment at Sc0000003:1868049..1875004-

>Blg00715.0 ID=Blg00715.0|Name=Blg00715.0|organism=Branchiostoma lanceolatum|type=CDS|length=924bp|location=Sequence derived from alignment at Sc0000003:1868049..1875004- (Branchiostoma lanceolatum)
ATGAATCTATCCAGCGTGTACGTGCTCGCCAGCCTGGCCGTGGTGTGCCT
GCTAGTCAAGGAGACGCAGGCTGAGTACTTGTGCGGATCCACCCTCGCCG
ACGTGCTCTCCTTCGTCTGTGGGAACAGGGGATACAACTCGCAACCCAGA
AGGTCCTTGGGCAAGAGAGCAATTGACTTCATCTCGGAACAAGAAGCCAA
GGACTACATGGGCGCCATGCCTCACATCCGGCGCCGCCGAGGCCTGGTGG
AGGAGTGCTGCTACAACGTGTGCGACTACAGCCAATTGGAGAGCTACTGC
AACCCGTACACCACCGCTCCCGCCACCGCCACGCCCGTCAGAACAGCTCC
GCCCGAAGAGCAAGAAGAAGAACAGCAAGACGAGGACGCCGCCCCTCTGG
ACGGCATGGTAGGCGACCAAGCTCCCCTCGGATCTATCGAGAACATAGAA
AACTTGGTCTATCATTACGACAGGGACGACATCACGGTAGACGCGGCGAA
AAAGGAGCCGAAGAAACTTAAGGAAATCCTCGGCTCCTTCGAAGATAAGA
AGGCAAACCCCGTCTTTCCGTTCATCAGACAATCCAAGAACGTAAAACCG
AACAAGTTTCCTGACTCATCCGCCCACCAATACCCGACCGACCTCGTAGA
AGAAGGACCAACCAACGAGATTCCGGAATCGCCTTCCCAGAAGCCCACAC
TGGAGCGCCTCGGATACAAGGACAACCAAACGGACAAGAAAGAACCAGCA
GAAAACAACAACAACAACAACAGAGCCAGAGACAATAGAACCAAATCCTC
CACAGTCGAACCACACACTGTGCCAGACTACATATCAAAACAGTACACAC
ACAAACCCCTCATCACGTTGCCGCGGGGCACGCCCAGAAGAATAGAATCC
CCTGGACAGCTATCACTCAACTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg00715.0Blg00715.0-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg00715.0-exon-Sc0000003-1570713199:1874833..1875004Blg00715.0-exon-Sc0000003-1570713199:1874833..1875004Branchiostoma lanceolatumexon
Blg00715.0-exon-Sc0000003-1570713199:1869568..1870001Blg00715.0-exon-Sc0000003-1570713199:1869568..1870001Branchiostoma lanceolatumexon
Blg00715.0-exon-Sc0000003-1570713199:1868049..1868366Blg00715.0-exon-Sc0000003-1570713199:1868049..1868366Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000003genomeSc0000003:1868049..1875004 -
Properties
Property NameValue
GeneIDBlg00715