Blg00714.0 (mRNA) - B. lanceolatum

Overview
NameBlg00714.0
Unique NameBlg00714.0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000003:83608..88243+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg00714.0 ID=Blg00714.0|Name=Blg00714.0|organism=Branchiostoma lanceolatum|type=mRNA|length=4636bp|location=Sequence derived from alignment at Sc0000003:83608..88243+ (Branchiostoma lanceolatum)
TTTTAATGGCCTTTAAGTGTGTTTCCCGGTCCATTTTTAGTACACTGTCA AACGAGTACTTCTGACTAATTTTGCGCCGTCACTTTACCAGAAGATAGTG TTTTATTTTCCCGGACCAATGACAAGAGTGAATCGGGATGATTGACACAA CGAAGACGAGACTGGGTGGGTACTGAGCAGAAAAGTTTGTCCAGTCACAA GAGGCGGTCTCTATTGATTATGTCTTTTGTTATCTCAACCAATCACGAGA GTGGATGGAAATTATTGGCACAGTGCAGACAACGTTGGGTGAGTATAAAG TCTCTTCAGAAATATATAGCATTTTGTCTATCATCTATCTTTCGTGCCGC AACTAACAACTTTCAAAGTATGTCATCGAAAACCAATATGCGGAGATGGT ACAAGAGGTTCGCCAATACCTTGCTGACAACAGTAAGACAGGGCCATATG AACGATTTGGTTAGCTTCGCGTACGCAGCTGATCCAGAGGGCAACTTCAA GTTCTATGGGCCTCCGGAACTTCACGAAGCCTTGAAACCGATCCTGCCGA CCGTGGAACTGAAATGTCAGCAGTTTGCTCAGCTACAAAGTGAGTAATTT TGGGATAAAGATATAGTCCTAAGACCTTATTTTCAAATTCTCAGTTTACT ACAGTGCTTCCGACAATATAAACTTTACATTAGATCTAGCCCGTTTACTC TTATCTCGTTTTGTATAAGTATATGACCAAATCGCCGAAACCATATGGCA TATAGAAATTTGTACTGCTAGTGGAAGACAAAATGCACAGAAAATCATAT GATATGCTTTCCTTTATATTTTGTTTTCCACAAAGATTTTGTGTGGTCTC TTGGCGGAAGCAAAATGGCGATTAGTTTTTGTGGTATGTCAACGTGCGCA TTTGTTAAATTTTGCTTGGCTTCTTTGTTTTTCTCTTCAGCGGAAAACAC CGCACCAGTAGCAGCATCGGACGTCCAGCTGTCCGAGGTCAAGGTGGTGA CATACCTCACGGCGCCATCTGTGCCAGTGTCTCAGGTGGGCAACAAGGAG GCTAGACGCCTTCTTCCGCGCTGGCTCAGGGCACTGAAGGCAGGCGATGG GCAGGTTAAGTACGGAAAACCCGAACACCGCCCGTCGTTCTGGCCCGAGG ATGTGCCTTGGCTAGAAAAGCTGAACAAGCTGACGACCCGACAGATGCGA GAAGCAATGGCGGCAGCGCTGTCTCACGTTGGTGAAGACCCGCTGACCTT CCAGGCGACCGGACCACCACGCAGCAACCAAGAGACAGCGCCTCCCTCCG CCCAGGCTCCAGCAGGCAGAGCTGACAACGACCAGCCACCCCTGTTGGAC CAGGCACCGGCATCCACCCACGGACCAGAGAGATCCTCGTCACTGCTGGG GACACCACAGTCGCACTCAACACCGGTCCGGGAGGGGGGCTTATCACTTC TTGACTCCTCTTCTTCATCTTCTTCATCTTCTTCTCCAGACTCTCCTCCA TCTACTCCTCCTCGACCCATTCTAGCTACACTGCAAACTGTTACTCCTTC TCGGTACTCTCTAATTTCTCCTGGACCGGCTAGCAAGAAGCGACGGACCG AGGGAGACCACAGGAGGTGAGAATAAGTTTTTGACTTTCACTTTGTTTTT ATACAAAAAATGTATAAACGCATGTCATGTTAGTAATTAGTCCGTAATTC ATCCACCAGTACCCAATATCAGGTCACCTAGTTTTGACCTCTTTTAAGTC ATATGTGTGCTGTGTGCATGTACCAACGTAAAACAAAATTTAAAATTTGA ATGGGAAATATTGTTCCTTCAGTGCCAAGAAGCGCTCCAAGGAGAAGACG AGCAAGAAGACAGCGGTGCCGGTTCGCGAGCGTGTGAAGCGGCCACGTCT ACATTATCAGAAATACACTCCTAGTTTGTATTAGTTTTTTCAAGGACTAT TTTAACCTCCTTGGTTTTTTTAATCCAAATTTTCATTTTCATGTATTCAT GTCAGCGACGCTCGCAATTCTTTGCGTAATGTTTATTTGTAGTATTTTGA GCTCTTCCACATAAGTCATTGCATGTTTTTGTTCAAAGTTCTCATACAAT GTACTTTGTGTTTATTGAGTATTCATTTTTGTCACACGACTTTTATGTCA TCACATTATACCTATTTACTNCCTACTTACTTACCAAGAATCATCCTTTT TTTAGATTTTGTACTTGTACATGTTCTTGAGGAAAATAAAACATTTCTTG TGCAACTGAACTTATTTCATCTAACTCTGTTGCGTGACGAAACCTGCGTG ATATACTAGTACCAGTTGATATCTAGTCTGTAGTGCTTCTAGTGTAGCTG TGAGAATTAGGATAAAATCCCACGGTCAGTTTACCGTCACGTATACAGTG TCAAATAACATCTAAAAAAGTATATACAGAACTGTTCACTTGTCTAACAT GAAGTTACAGATACGAGGTAAAAACATAATCCATCTAAGGGCCCTGTCAC ACTTATGCGTATATTCATGTGTACATGAGTTCCACAGCAACATTTTGTCG GTTTAAATAAATTTTGCGGGGAGGAAGCTGTTTTCTTTGACCCACCGTTG AGTAGTCTAGTTATCAAACCAAGGAAATTACTTCTTCGGCTGCAAACTTA ACCTAAACCCGAAACATGTTGATACGCAACTCATGCGGACTTGTATATGC GCACATGTGTGACTGGGGCTTCAGGCACGCGCTTATCTAAGGTGCGTGCG TTAGTCCGGTATACGTATATGAACTAGTACTGTACAAGATGAAAGAGCTT AGAAAAAAATCGTATCGTACCGAACGAGGAATTGAAGAAACCAAATACCA AAAACAAATTGTACAAATGATACAAGAAGAAACAAGGTTAATCATCATAT CATACTGTAAACTAGATAAATCAACATCGGGAGATTTTACTGTATCATTG GCAAGTTAGAAATATGGCTGTCGGTCGTTGAAAAATTCCTCGGTAGATCG CGTGTATTTGTCGTATAGAATGACTTATTACACGTATTCCAGGCTCCGCA TTCTATTTGTAGCGATGTCAAGTAATATCAAGTGAGTTTGCAATAGGGCC GTTGGTCCTTGAAAATGTCTCGGTGCTATCGTGTGCGTTTGTCGTATAGA ATTAATTATCAAGCGTATGTTGTTTTTTTTTGTACCGTATTAAGTGTCCT TGTATTAAGTAAAGTTTAATAGAAATAGGACGTCGAGTGTTGAAATTTTC TCGGTGATCGCGCGTGCTTTTGTGGTATAGAATGAATAAATACACGTATC GTAATTAAATAAAGGTCGGACGTTGAAATCTACCTATTGTTTACATCTGC GTAATTTGTATGTGATTTACTAGCATCGACTACCTAACTCGGAACTCCGG TAGGTGCTACTTTCTAAAGAACATGCAAAAAAACGTCTTGAAGGCAACTG TACAACTGGTAATGAATACGCATAGTGATGCCGATAATTTATTCTGGTTG TCTTGGTTACGCTAGCAGCGCGCATGCGCGCATATTAATCAGCATCTGAA ACGAGTCGCGTCACTTTCAAATTAGACGCCATCCAGCACAGCAGTCAAGG AATACAGCAGAGCTGCGTGACTAAACATGTTAACATAGGTATGAGTTTTA TTTTGTTACTTTATTTTGTGTTATAGCGAGCCTGTTATAGCAGTGTACTA ATAATTAGTTTCTGACGTAGTTTTGTTACCGATTTTGCCGAGTGAAGTAC CGATACAGGTACCGGTAAATGCTCGCTCAGAAGATCGTCTGTTTGCGCAT AATAATCAACCACAGAGTACCACTTTTTAAGATAATCAAAAGTAAAAAAA ATGCATATGGAAGGAAATGTAATCGTGGATGTTTACCCTGACAAATATTG TAAGTTAGATATTGCAGTGGGTCGCGTGTATGCACGGTACGTGCGTTCGT CCGGTAAATTGAAGAAATTCACGTTTTTACCTGGTGTTGGTGTGCGGTGC CGACTGCCCCGAGTAGATTTTGTGCTCGCACGGTTCATGCGTTTGTCTGA TAAATTGAACCGCACTTTACCAGGGATTCCTTGTACGTGCGCCCCATGTG CCAACATAGGGTTAGGGCGTTGAAAACCTGTCCTTAGATCTTGTATTTGT CGAAAAGAATTGATAATAACACAAGACACCCGGCGTTTTAAGATCGGTGG GGGGCGCCCGCGTGTCAACATCGTGCTAGTGGAAGGGCTACACCCGCGTG CCAACTAGCCATCGTGGATTACTTAGGCATGCGCTCGGCGTTTCAACATC GGGCTAGGGGAAGGAACACACGCGCATGTCACACATTCTTTGTGCGGTCG TTTCAACGGTTCTTTGTGCGCGCGCCCAGCGTGCCAATATCGCGCTACGA GAAGTTTTACACGCACGTGCCAACATCGCGCTACGGGAAGTTTTACACGC ACGTTGCAACATCGCGCTACGAGAAGCTATACACGTGCGTGCCACCATTG CGCTACGGGAAGTTTTACACGCGCGTGCCAACATCGCGCTACGGGAAGTT TTACACGCGCGTGCCAACACTGCGTGTGGTGACGAAACTCACGCTGTGTA TTTCTTCACCTGAAGTACCCAAAGTATAGCTCGGAG

Coding sequence (CDS) from alignment at Sc0000003:83608..88243+

>Blg00714.0 ID=Blg00714.0|Name=Blg00714.0|organism=Branchiostoma lanceolatum|type=CDS|length=1158bp|location=Sequence derived from alignment at Sc0000003:83608..88243+ (Branchiostoma lanceolatum)
ATGTCTTTTGTTATCTCAACCAATCACGAGAGTGGATGGAAATTATTGGC
ACAGTGCAGACAACGTTGGGTGAGTATAAAGTCTCTTCAGAAATATATAG
CATTTTGTCTATCATCTATCTTTCGTGCCGCAACTAACAACTTTCAAAGT
ATGTCATCGAAAACCAATATGCGGAGATGGTACAAGAGGTTCGCCAATAC
CTTGCTGACAACAGTAAGACAGGGCCATATGAACGATTTGGTTAGCTTCG
CGTACGCAGCTGATCCAGAGGGCAACTTCAAGTTCTATGGGCCTCCGGAA
CTTCACGAAGCCTTGAAACCGATCCTGCCGACCGTGGAACTGAAATGTCA
GCAGTTTGCTCAGCTACAAACGGAAAACACCGCACCAGTAGCAGCATCGG
ACGTCCAGCTGTCCGAGGTCAAGGTGGTGACATACCTCACGGCGCCATCT
GTGCCAGTGTCTCAGGTGGGCAACAAGGAGGCTAGACGCCTTCTTCCGCG
CTGGCTCAGGGCACTGAAGGCAGGCGATGGGCAGGTTAAGTACGGAAAAC
CCGAACACCGCCCGTCGTTCTGGCCCGAGGATGTGCCTTGGCTAGAAAAG
CTGAACAAGCTGACGACCCGACAGATGCGAGAAGCAATGGCGGCAGCGCT
GTCTCACGTTGGTGAAGACCCGCTGACCTTCCAGGCGACCGGACCACCAC
GCAGCAACCAAGAGACAGCGCCTCCCTCCGCCCAGGCTCCAGCAGGCAGA
GCTGACAACGACCAGCCACCCCTGTTGGACCAGGCACCGGCATCCACCCA
CGGACCAGAGAGATCCTCGTCACTGCTGGGGACACCACAGTCGCACTCAA
CACCGGTCCGGGAGGGGGGCTTATCACTTCTTGACTCCTCTTCTTCATCT
TCTTCATCTTCTTCTCCAGACTCTCCTCCATCTACTCCTCCTCGACCCAT
TCTAGCTACACTGCAAACTGTTACTCCTTCTCGGTACTCTCTAATTTCTC
CTGGACCGGCTAGCAAGAAGCGACGGACCGAGGGAGACCACAGGAGTGCC
AAGAAGCGCTCCAAGGAGAAGACGAGCAAGAAGACAGCGGTGCCGGTTCG
CGAGCGTGTGAAGCGGCCACGTCTACATTATCAGAAATACACTCCTAGTT
TGTATTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg00714.0Blg00714.0-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg00714.0-exon-Sc0000003-1570713199:83608..84196Blg00714.0-exon-Sc0000003-1570713199:83608..84196Branchiostoma lanceolatumexon
Blg00714.0-exon-Sc0000003-1570713199:84548..85223Blg00714.0-exon-Sc0000003-1570713199:84548..85223Branchiostoma lanceolatumexon
Blg00714.0-exon-Sc0000003-1570713199:85430..88243Blg00714.0-exon-Sc0000003-1570713199:85430..88243Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000003genomeSc0000003:83608..88243 +
Properties
Property NameValue
GeneIDBlg00714