Blg00707.0 (mRNA) - B. lanceolatum

Overview
NameBlg00707.0
Unique NameBlg00707.0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000003:245410..248134+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg00707.0 ID=Blg00707.0|Name=Blg00707.0|organism=Branchiostoma lanceolatum|type=mRNA|length=2725bp|location=Sequence derived from alignment at Sc0000003:245410..248134+ (Branchiostoma lanceolatum)
GATAGACACAGCTAACTTCCCAGTCCCAGCTGAGGAACAGCAGAAACAAC CAACGTCAGCCGACTTGGACTTCACCGTCTCAGCTTAGCAAAGACACAAC ATAACAACTGCCAACAAACAAACGTTTGGCTTCAGGATGCCAGGTGAGAA TTAAGTCTTGTCTTTTTGGATAGCAGATATCAGTTTGCATGTAAGAGTTT GCAGGTAACATGTACGATGACTATATTTTTACATGTGCGATGAGTGGGCG GTTCTAGTGGATCGGGGGAAGAGCGGCACTTGACAGAAGTCAAGTCAGTG ATGAGTATATTTTTTGTTTATTTTTTTCACAACAAAACATTCGAATAATC TTTAGAAAAAAACTATGAATGAGTATAACCTAAAAGTAGATGGATGGAAA AACGCTTGGATGCGTAAGAATAAGAAACGCAGGTCACTGAGGGACAACAC CGCTTTTTGGAAGCAATGTATATGATAACTTGCAGAGGAACATTCGGCAT TTCCAATAGCTTAGAAAACCTGCAACCATGAAGTCATGCTGTAAACATGT TGTTTTTGCTACGTTTCCGAGTAAAATAGGGTCAACGACCTGACCAGACG GTGTCACTAGGGTCAGTGACCTGGACCAGACGGTTGTCACCATGGTTACT AGAGGTGTAGCATACGCCCCGTGGTGTTCGATTACATAATGTAACAAGTG CTGGAGGGGCCCGGGTACCATATGTATGAATGTGTTTGAGTAAGAATAAG CAGAGCAGTAGTTTGTTAGGTTAGACCATGCATATGAGAAGGTAAACACT ATGTATTTGTTTGCAATTGTTACCTTTCTAGTGCGTATCTTGATCCCAAA TTATTGCAGTCTTACTAGTGACGTGTATGCTGGTGATTTTTCAATTTACT TTGTTTGGCATGTCAGAAATTACGTTTGATCACTCCCAATGTCTGTTAGT GTTTATATCGTGACGATTTCAATCTCTCTCGCACAGGCAAGATACCCAAC AAGATTAAACCGATGCTGGTTCTTCTGCTGATCATCCTGGTGGAAACTGG ACTGATCACAGCCTGCAGCAGCAGCTGTTCATCACGATGTGACTGCGAGA GCAGAGGCCTCAGCAGCGTTCCTCAGGACCTGCCTACAACCATAACACAT CTTGGCTTGGACAACAACGCCATCACAACCTTAAGTCCGTCCGACTTCTC CCGGTACGGCAGCCTGACTCACTTAGGTCTTGGACACAACCAGATCTCCG TAATCACCAGCGGAGCGTTCTTCAACTTGGCCCTGACTACCCTGTACCTT GGCAGCAACCAGCTAAACAGCCTCCAAACCGGCATGTTTGTGGGACTTGA TAACCTGGAGAACCTTGATCTTGTTTCAAACAACATCCAGAGTATCGAGG CGGGGACCTTCTACACCACCCCGCAGCTGCAGAACCTTACACTTCAGTCC AACAACATCAGCAGCATCGTGGCTGGCGCGTTCACAAATCTACCCGGGCT CCACACATTAGACCTCAGCAGTAACCAGCTAACCAGCCTCCGAGCCGACA TGTTTACCGGGCTGGATAATCTAGAGAACATCAACCTGGAGCAGAACAAC ATCCAGAGTATGGAAGCAGAAACCTTCAACGCCTTCCCGCAGCTTCAAAC TCTTAACCTGCAGTACAACGGCATCAGTACCATCACAGCTGGCACTTTCG TAAATCTGCACCGGGTGGAATCTTTGCAGCTTAACAATAACCAGCTAAGT GGCTTCCAGGCTGATATGTTTGTTGGACTTGATAACATGCAGACCCTTAG CCTGTCCTACAACAACATCCACAGTATCGAGGCAGGATCCTTCAACACCA ACCAGCAGCTACGAACACTTGAACTTCAGCACAACAACATCACCGACATC GCAGCTGGCCTGTTGGCAAATTTACCATTGCTCCAAGACTTGGACCTATC TTACAACAACATCAACACTATATCAGCTCTGGCATTCCTGAATTTGCCAG TGCTCCAGTACATGGACCTATCTCACAACAACCTGAACGCCATCACAGCT CTGGCATTCGTGAATGTGCCGGTGCTCCGCTACATGGACCTGTCTCACAA CAGCATCAGCACTTTCCCTATTGAGGCCTTGTCGAATCTCAATACGTCAG AATTGTCAGACCTTAGGATGGACCACAACGAGATGGAGACACTCCCATCC GCAGCGTATGACATACTGACCAACATCTCAACAGTTGACGTCACCAACAA CCCCTGGCAGTGTGACTGCAGGATGCTTCCCTTTAAGCAGAGGTTGACGG GTTTCCCGGCCGTTGAAAACCAGTTCCTGTGTGCCGAACCGGCTAACCTT GAAGGGAAAAGCTTGTTGCTGGCTGTCTATCCTGCAGACCTGAACTGTGA AGAGCCGGCTTCGTTCCCCCTGCATGTGTTCCTCAGTGCGCTAGGGGGCG TTGCAGTCGGGATCCTCCTCGCCCTGGCTGTGCTCCTGGCGATCTGGTGC GGCAAACGGACACGGAAAACCAGCCCTGCCCCGGACACGGACGGCTCAGG CAGCGACCGTCATCAGACAGGACCTGACGTCACGGAAACGTGTGCAGCAG AGTCTGGTGACGTAGAGAGCGGATCAACCCATGAGCTGGTCCCAGCCCAG CCGGTTCCTCACAGCTTTGACAGGATGGCTCTCCCTCCCCTCAAACTTCC CCCCATAACGGGACCGCGTCCCTAG

Coding sequence (CDS) from alignment at Sc0000003:245410..248134+

>Blg00707.0 ID=Blg00707.0|Name=Blg00707.0|organism=Branchiostoma lanceolatum|type=CDS|length=1674bp|location=Sequence derived from alignment at Sc0000003:245410..248134+ (Branchiostoma lanceolatum)
ATGCCAGGCAAGATACCCAACAAGATTAAACCGATGCTGGTTCTTCTGCT
GATCATCCTGGTGGAAACTGGACTGATCACAGCCTGCAGCAGCAGCTGTT
CATCACGATGTGACTGCGAGAGCAGAGGCCTCAGCAGCGTTCCTCAGGAC
CTGCCTACAACCATAACACATCTTGGCTTGGACAACAACGCCATCACAAC
CTTAAGTCCGTCCGACTTCTCCCGGTACGGCAGCCTGACTCACTTAGGTC
TTGGACACAACCAGATCTCCGTAATCACCAGCGGAGCGTTCTTCAACTTG
GCCCTGACTACCCTGTACCTTGGCAGCAACCAGCTAAACAGCCTCCAAAC
CGGCATGTTTGTGGGACTTGATAACCTGGAGAACCTTGATCTTGTTTCAA
ACAACATCCAGAGTATCGAGGCGGGGACCTTCTACACCACCCCGCAGCTG
CAGAACCTTACACTTCAGTCCAACAACATCAGCAGCATCGTGGCTGGCGC
GTTCACAAATCTACCCGGGCTCCACACATTAGACCTCAGCAGTAACCAGC
TAACCAGCCTCCGAGCCGACATGTTTACCGGGCTGGATAATCTAGAGAAC
ATCAACCTGGAGCAGAACAACATCCAGAGTATGGAAGCAGAAACCTTCAA
CGCCTTCCCGCAGCTTCAAACTCTTAACCTGCAGTACAACGGCATCAGTA
CCATCACAGCTGGCACTTTCGTAAATCTGCACCGGGTGGAATCTTTGCAG
CTTAACAATAACCAGCTAAGTGGCTTCCAGGCTGATATGTTTGTTGGACT
TGATAACATGCAGACCCTTAGCCTGTCCTACAACAACATCCACAGTATCG
AGGCAGGATCCTTCAACACCAACCAGCAGCTACGAACACTTGAACTTCAG
CACAACAACATCACCGACATCGCAGCTGGCCTGTTGGCAAATTTACCATT
GCTCCAAGACTTGGACCTATCTTACAACAACCTGAACGCCATCACAGCTC
TGGCATTCGTGAATGTGCCGGTGCTCCGCTACATGGACCTGTCTCACAAC
AGCATCAGCACTTTCCCTATTGAGGCCTTGTCGAATCTCAATACGTCAGA
ATTGTCAGACCTTAGGATGGACCACAACGAGATGGAGACACTCCCATCCG
CAGCGTATGACATACTGACCAACATCTCAACAGTTGACGTCACCAACAAC
CCCTGGCAGTGTGACTGCAGGATGCTTCCCTTTAAGCAGAGGTTGACGGG
TTTCCCGGCCGTTGAAAACCAGTTCCTGTGTGCCGAACCGGCTAACCTTG
AAGGGAAAAGCTTGTTGCTGGCTGTCTATCCTGCAGACCTGAACTGTGAA
GAGCCGGCTTCGTTCCCCCTGCATGTGTTCCTCAGTGCGCTAGGGGGCGT
TGCAGTCGGGATCCTCCTCGCCCTGGCTGTGCTCCTGGCGATCTGGTGCG
GCAAACGGACACGGAAAACCAGCCCTGCCCCGGACACGGACGGCTCAGGC
AGCGACCGTCATCAGACAGGACCTGACGTCACGGAAACGTGTGCAGCAGA
GTCTGGTGACGTAGAGAGCGGATCAACCCATGAGCTGGTCCCAGCCCAGC
CGGTTCCTCACAGCTTTGACAGGATGGCTCTCCCTCCCCTCAAACTTCCC
CCCATAACGGGACCGCGTCCCTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg00707.0Blg00707.0-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg00707.0-exon-Sc0000003-1570713199:245410..245552Blg00707.0-exon-Sc0000003-1570713199:245410..245552Branchiostoma lanceolatumexon
Blg00707.0-exon-Sc0000003-1570713199:246396..247369Blg00707.0-exon-Sc0000003-1570713199:246396..247369Branchiostoma lanceolatumexon
Blg00707.0-exon-Sc0000003-1570713199:247442..248134Blg00707.0-exon-Sc0000003-1570713199:247442..248134Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000003genomeSc0000003:245410..248134 +
Properties
Property NameValue
GeneIDBlg00707