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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000003:4075636..4081071- Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg00675.5 ID=Blg00675.5|Name=Blg00675.5|organism=Branchiostoma lanceolatum|type=mRNA|length=5436bp|location=Sequence derived from alignment at Sc0000003:4075636..4081071- (Branchiostoma lanceolatum)
GAACCACTTGCCCTGACAGTGCTCAGGCAAACATGTACAGCACAGGTATG
GACGACTCTGACAAGGAGGTTAGTATACACATTCAATGATTTGAAGCTTT
TCTGTCTTGATATGAGGTCGGAACAATTAAACGTATTGTTTCTCGGTTTG
GGAAGGACTTGAACGTTGTCCGGTTTCAAGCCAAATTTCTGCCCCTGCCA
AATATTAGCCCCAACACTGCCAAATATTAGCCCCAGTATACCTGAGGGGA
AAGAAGTGGGCCGTGGTAATTTTCGAAGTGGGCCGTGGTAATTTTCAAGC
AGAAACGAAGTCTGAGCGGATTTTACTTTGTGCACCACAGTTTGAGGATG
CTTGCTAGTTCCATAACTTAGGCAGAAAGACACTGCACCAGCATGCCTGT
CCTTTAGTTCAATGAGAGGAAATATTGAATCTGACCACTAGATATTCACG
TGCACCCCCTCTAAAACTGAGCTCGCCATGCATTAGGCAAATCTGGCCCT
AAGGCTAACATAATTATTTTCAATTTCAATTCTAATCTAATTTTCTTATT
AAATCAGCGTGAAGAAGAGTAAAAGACAGCGTTTACAACTGAATTGCGTT
GGTATTTCTGAAGAATCTGTCTTTTTTTAGACGAAGTCCTTTCAAGGTCT
CGAAGCCAAACTGGATGACGTAGTTGCCGAGGTGAAGCATATCAACAGCT
ATCTGGAGAGCAGCAGTGGGCAGAAATGGTGCACCAGGAAACCGCCGGGG
CAGGTAAAATGTGGACTACTTGCTTTTGAGGCCACGCACACCAGTTTGTT
TTGTGGCTTCTTCGAAACGGATTTGAACTAATCTCAAGCAGATCTACACG
GGGCGCGAAAATCGTATATGCTAGCCAGAGAAGGTCTCAGCCAGATAAGC
TTATCTGGCTGACTGGACCTTCTCTGGCTAGCATATACGATTTTCGCGCC
CCGTGTAGATCTGCTTGGAGATTAGTTCAAATCCGTTTCGAAGAAGCAAC
AAAACAAACTCATCATATTGTATGAAGCTGGTGTGTTATGCCGACCGGCG
GCAATACCGGCTATGTAAATACAGATACAGATGTTGGACTGGTATACTGA
ACAGATGCAACGGGCTAAGGACTGTACACACATTTTTACTCAATGAATGA
AGACCTTTATTGCACATTTCTGCCACACTTGGCTAAGTACAGGTCACAAC
AAAAGATAATACAGGTACAGTTAGCGGATACAAAAGAATATGACTATCAT
TAAATAAATTCTACTTCTCCTCGCTTTTCGGTTATAGTAGATATAAAAGA
ACAGACGTGTTTTTCAATGGGAGGTTTGTCTAGTCGCATTAGAAATATGA
ATTTTTGAACAGTACTTAAATGTGTGAAGTAGGGAAATAGGTTTTCTATA
TACAAGTAGCAGATTGAAGTTTTCATTTCAGCCTTATAACTTTCTTGCTA
ATTTTGTCTACCCCTCCCCAGATCCGTGTGCTGATCAACCCAACCCTGTT
CTCGCTGAGGGATGTGGACACCGTCAAGCAGGAGTTCTCGGCGGAACTCT
GGTTTGAGATCTTCTACAAGGACCCGCTACTCAAGGGGATTACAAATAGA
GATGTAAGAGAGATAAGGTTATTGACAGCGCCAGTTCATTTTTTCGTTCT
TTGAAAAATGAAGATTACTTTTTTAAATGCACAATGAAAAATAAGTGTTG
GGTTCTTTTACGGGCACCTGATGAGGCCAACGCCTGAACCCCCTCGCTTT
ACGTCACCATCCGAAGTGACGAATACAATCCCTTATAAATCTTTACAACA
TGTCCGAGGTGGGGTCGAGCTTGGGATCGAACACCTGCCCACAGATTTGC
GGAAGTTGATCCATATGGACAAGTAACGAAGAATGTGGTCTTAATAATAG
ACGTGACTAAGTATGTTTTGTTTCAGCACGTAGACTGGGACAACCAGTGG
GACCCTCGGATCGAGCTGCGGAACACGGTAACCCTAGAAACCGTGACGCA
ACAGAACCTGATCCCGGTGGTCGGGGAGGACGTTCCCATCGTGCACGAGT
TCAGGAAGGTTCGGGCGACCTTCAAGGCTGACATGGACCTCACCGACTTC
CCTGTCGATCACCAGGTGTATTCTTGTAAGCCAATAGACCGATCCCAAAG
CCACGCCCCCTGTTCGATTTCGAATAGAACAGGGGGTTCTATGGGTCTTC
TATTTGTTCGATATGGTGTTCGACAGGATCGGTCTATTCACATTTTCAAA
TGCGTACCTGTAACCGCTGTTCATTGTGGGCTAAGGTCAAAGTTTAGACC
ACAATGCAACACGACTGCATACGCGCATTTTGAAGCTGACATGGCTTATT
GCGTTATTGATTCTAGGATTCACCGTTTTTCTTTTTACTTGAGTTGAAAA
AGAGGAAAATATTATGTCCTGTTCTTGGCACATCCTCGAAATGTTCTTAT
TCTGGTACGAATAATTGAAGCCACACATTTTTGTGACAGGTTTTCATTTT
CAAAAGATATTAACTAGCTTCCTAGATCCTATGTCGACTTTGTGGCTTCA
GTGACAGCCTTTGGGACTTTTCGACAAGCAAAGTGAAAAGTGTACCATGG
CTTAACGTCCCGTCCCAAGGCCGGATCACGACTCTTTCTGGAAGCGAACT
CCCGTCCAGGCCACTGTACTATGCAGACTACATTTTCATCCTTGATGTTG
TGAATTATTCTTTCAGAAACTGACTGTCCAACTGATGTCAGGCTGGATGA
CAAAAAAGGTTTTGCTGAGGAAGAACTACGGATCTACTGACACGATTACT
GCCGACGACTTTGCAGGTAGGTGGCACTGGTGGCGTAAGGGCAGTTTGGC
CCAGAACACAGACGTCATGGGTTCGAATCCTGACGTGCCCCGTTGACCTT
GTGCCCTTTGGAAAGGCACTTTACACAAATTTCCTCACTTTAAAATGAGT
TACTAGGCGACTACAGAAAGGGCATTTTTGCTTGTTATATTATATATTCA
TTATATATACTAGAAAAGGCTTGTTATCATATATACTAGCCGTTTCTAGT
ATATATAATATAACAAGCAAAAAAACCCTTTCTGTAGTCGACACGGCTAA
TGAGTAGCTAGCTTACCTTAGCTAATCTAGGCTAGGGACGTCCCTTAATA
GGACGTTAAATGGGGGTCCCGGTGTTGAGGGGAACGATTGTAAGGCAAAA
AGTAACCCCCGAATCCCTATCGCTTTTCAAATTGGTATCAACAAATGTCG
ACTGTGTAGCCTTAACGTCGTTCTTTTACCTCATTCAACAGATGCTGACC
AGTGGAAACTGAACGAATATCTGGAGTGCAAACCTGGCATCAAGGGGAAC
AAGCAGTCCAAAACATTCGGAGAGTACCCCATGTACTACATCACCGCGCA
TGTTCAGAGGAAGACGGCTTTCTACATGTGGAACACGGTACTCATCTTGG
TAAGTCTGATGTCTTTTTAATCTCCAAGCAGATCTAACGGTGGCAAAGAC
CATATCCAACTGGCAAAAGGAGTTTTCATTGCCGGTGGCTGTAAAAACTA
ATTTTGCCAGTTGGATACGGTCTCTGACACCATTAGATCTGCTTGGAGAT
TAACATATTTTACCTAATAGTCCCATTGTCATGTTTGAGGGTCGAAGATC
ATAGTAGCTTCAGCACACATTCGCTCTTTCCAGGCTCCCTACTTGTATGA
ATCAAGCAACGGTCCAGACATACACAATTCCTCAGTGGAGGTTTAAAAAA
CTGATAAAACAGCAATTTGGTGCCACTATTATCATCTGTTGGACAGGAAG
TATCGCATTGCAGTATGGGTAAGGGAGTGATGTCTGCCATCTCTGATTGC
CTTGCTGTTTTTTTCTTCACAGTTTGTCATCACGGCCCTCTCCTTTACCG
TGTTCTCTATTAAACCAGAAGAACACAAAGACCGTCTCGGTATCATCTTC
ACTCTCCTGCTCACGACGGTAGCCTTCAAGCTGGTGGTGTCCCAGTATCT
TCCCACCGTCTCCTACCTCACTCTGCTGGTAAGTGAACAATGCAAGTCTT
TCTACCTTACCCCAGATTTCGTCGTTACCTCTTTTTAATCTTTTTTCGAC
TTTAGAACCATGACGATGGTGCGTCAACGTCTATGCATATCGTTTTTTCA
GTGTGATACCTACTATGTCTATCACCTCATGGGGCAAGACCTAGATAGGG
TGCTCATCTTCTATGATACCATCTTAACTAATATACAATTTAAACTTTAC
CACTGGATAAATTGTATGTAAGTACTGATTAGTTCTGCTGGCTCATTTTA
GTGACGCTGAAGAAGGGTGATGGATGTCACCCAAAACGTCCGGAAATAAT
CTCCGTAATCTATCCAGTAATAGACTCGGTTTAAATTGTATATTCAGTTT
TGTTAACCTGGATGTCTAACAGTCATCAAAATATCATCTTAAATTGATCA
TAGGACAAGTACGTGTTGGGGTGTATCATCTTCCAGTGCAGCGTGGCTGT
AGAGAACACTTTAGCCTCGGTCTTTAAGGACGGGTACAGTGCATGGGTGT
TTGACAGTGTCTGTGCAGCCATATTTGCGACTGTGGTCCTCTTAGCGCAC
CTGGTCTTTGGGAGAATCATATGGATGAAGGTATGTACACAGACGGATAG
AAGAGCAGATTTAGATGTTTAAATGGAGGGTCTGTATGGGGGATACTGAC
AACGCTAACGGCAAATTGACCTGTTATTGTGAAATGGGTGCCATTGCTGA
TTTCCTTTGATGATCTTTGATATCTTGTGTAGATTTTCCCTCGATCTGGA
ATGTTACATCCTGGGCTACTTTCAATGTAAAGGATTCTGAAGAGTTGCAG
ACAAGATGTGCTTTTTCACAAGTGCTGTCAATTCTGATTTGGTGCGTGGG
TGCAAATGGCAGTTGACTGCATGTACATGTTCACTTTCTTTACTCTACTA
GATGAACAAGAACAACAGAAAACTGAGAGAGATAGAAGAGAAGTTCAAGG
TAAATACTTCTCTTTGGTAAATGTTGATTAATGTTGACACAATTAAACAC
TGGAAATCTAAACTGGATCCAGGGACAACAGCATTATGATATTTTTTTTA
ACGCTTGAAAATTATTCAAATATACATAACTTTATTGCACAACAATTGTA
CGAGGTAAAAAGTATGGCATTCACTGGCACATAGATAACACTCTATTAGG
CTAATCAGTCTATCTTATACAATATGGCTAAATGAACCCGCGTTGTTTCT
TACTTACCAACAGCGTCTGAGTGAACGTGTGGACAAGGCCTACGAGGAGC
GTGACATGACGCAACAGGGCAGCACCAAGACCAACATCATCATAAAGGGC
TTTACTGATGAGGAGGTTCAGGAGGTGATGGTTGTCATCATTTGACACTA
ACTCAATTCAAACAAACACGCACATACACACACACA Coding sequence (CDS) from alignment at Sc0000003:4075636..4081071- >Blg00675.5 ID=Blg00675.5|Name=Blg00675.5|organism=Branchiostoma lanceolatum|type=CDS|length=1251bp|location=Sequence derived from alignment at Sc0000003:4075636..4081071- (Branchiostoma lanceolatum)
ATGTACAGCACAGGTATGGACGACTCTGACAAGGAGACGAAGTCCTTTCA
AGGTCTCGAAGCCAAACTGGATGACGTAGTTGCCGAGGTGAAGCATATCA
ACAGCTATCTGGAGAGCAGCAGTGGGCAGAAATGGTGCACCAGGAAACCG
CCGGGGCAGATCCGTGTGCTGATCAACCCAACCCTGTTCTCGCTGAGGGA
TGTGGACACCGTCAAGCAGGAGTTCTCGGCGGAACTCTGGTTTGAGATCT
TCTACAAGGACCCGCTACTCAAGGGGATTACAAATAGAGATCACGTAGAC
TGGGACAACCAGTGGGACCCTCGGATCGAGCTGCGGAACACGGTAACCCT
AGAAACCGTGACGCAACAGAACCTGATCCCGGTGGTCGGGGAGGACGTTC
CCATCGTGCACGAGTTCAGGAAGGTTCGGGCGACCTTCAAGGCTGACATG
GACCTCACCGACTTCCCTGTCGATCACCAGAAACTGACTGTCCAACTGAT
GTCAGGCTGGATGACAAAAAAGGTTTTGCTGAGGAAGAACTACGGATCTA
CTGACACGATTACTGCCGACGACTTTGCAGATGCTGACCAGTGGAAACTG
AACGAATATCTGGAGTGCAAACCTGGCATCAAGGGGAACAAGCAGTCCAA
AACATTCGGAGAGTACCCCATGTACTACATCACCGCGCATGTTCAGAGGA
AGACGGCTTTCTACATGTGGAACACGGTACTCATCTTGTTTGTCATCACG
GCCCTCTCCTTTACCGTGTTCTCTATTAAACCAGAAGAACACAAAGACCG
TCTCGGTATCATCTTCACTCTCCTGCTCACGACGGTAGCCTTCAAGCTGG
TGGTGTCCCAGTATCTTCCCACCGTCTCCTACCTCACTCTGCTGGACAAG
TACGTGTTGGGGTGTATCATCTTCCAGTGCAGCGTGGCTGTAGAGAACAC
TTTAGCCTCGGTCTTTAAGGACGGGTACAGTGCATGGGTGTTTGACAGTG
TCTGTGCAGCCATATTTGCGACTGTGGTCCTCTTAGCGCACCTGGTCTTT
GGGAGAATCATATGGATGAAGATGAACAAGAACAACAGAAAACTGAGAGA
GATAGAAGAGAAGTTCAAGCGTCTGAGTGAACGTGTGGACAAGGCCTACG
AGGAGCGTGACATGACGCAACAGGGCAGCACCAAGACCAACATCATCATA
AAGGGCTTTACTGATGAGGAGGTTCAGGAGGTGATGGTTGTCATCATTTG
A
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg00675.5-exon-Sc0000003-1570713199:4081004..4081071 | Blg00675.5-exon-Sc0000003-1570713199:4081004..4081071 | Branchiostoma lanceolatum | exon |
| Blg00675.5-exon-Sc0000003-1570713199:4080319..4080441 | Blg00675.5-exon-Sc0000003-1570713199:4080319..4080441 | Branchiostoma lanceolatum | exon |
| Blg00675.5-exon-Sc0000003-1570713199:4079469..4079600 | Blg00675.5-exon-Sc0000003-1570713199:4079469..4079600 | Branchiostoma lanceolatum | exon |
| Blg00675.5-exon-Sc0000003-1570713199:4078957..4079145 | Blg00675.5-exon-Sc0000003-1570713199:4078957..4079145 | Branchiostoma lanceolatum | exon |
| Blg00675.5-exon-Sc0000003-1570713199:4078256..4078355 | Blg00675.5-exon-Sc0000003-1570713199:4078256..4078355 | Branchiostoma lanceolatum | exon |
| Blg00675.5-exon-Sc0000003-1570713199:4077623..4077780 | Blg00675.5-exon-Sc0000003-1570713199:4077623..4077780 | Branchiostoma lanceolatum | exon |
| Blg00675.5-exon-Sc0000003-1570713199:4077044..4077199 | Blg00675.5-exon-Sc0000003-1570713199:4077044..4077199 | Branchiostoma lanceolatum | exon |
| Blg00675.5-exon-Sc0000003-1570713199:4076442..4076618 | Blg00675.5-exon-Sc0000003-1570713199:4076442..4076618 | Branchiostoma lanceolatum | exon |
| Blg00675.5-exon-Sc0000003-1570713199:4076073..4076120 | Blg00675.5-exon-Sc0000003-1570713199:4076073..4076120 | Branchiostoma lanceolatum | exon |
| Blg00675.5-exon-Sc0000003-1570713199:4075636..4075808 | Blg00675.5-exon-Sc0000003-1570713199:4075636..4075808 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000003 | genome | Sc0000003:4075636..4081071 - |
Properties
| Property Name | Value |
|---|
| GeneID | Blg00675 |
|
