|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000301:86586..92466- Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg00623.19 ID=Blg00623.19|Name=Blg00623.19|organism=Branchiostoma lanceolatum|type=mRNA|length=5881bp|location=Sequence derived from alignment at Sc0000301:86586..92466- (Branchiostoma lanceolatum)
AACACTTCATCACACGCACTCATATCATACCAGTAAAGAAAGTTATACTC
GTTTTAAAGTTTGAGAACCTGCCCATCCCGAAATGTTACAATGGAACAGT
CCGAACAAGGAAGGTCAAAGTTTAGGCGCTTGCTGACTTGAGCACTGCTG
CACAGACTGTTTGTTGTTGTTGCTCCAGCATATCCCAGTTCGTTTAAACA
CTTTCAAGTAAACCCCAAGTCTTTGGGACGTGTTGCAAAAGAAGCTCTGG
AATTCTGACTACAATTTTATACACGTGGGTTCACCCTTGGAGGAGACAGG
AGCTCGAAGGATCCAAAATGGCGGAAGCATCATCAGAAGGAGGAGAAGGA
GAGAGTCCATCACTCGATCGAAGCCTGCAGATGAACATGTTCGACTGCAG
CATCTGTCTGCAGATGTTCACCCGGCCCAAGGTGCTGCCGTGCGGACACA
CGTTCTGTAAGGACTGCCTGGTAACGTACGTTAAAGGCGGCTGGTCCTGC
AAATGCCCCACATGCAAAAGACCCGCGTACCTAAACGGAAAGAAAGGCTC
AGAGGGAGTGGAGAGTTTAACGGATAACATTTCCTTAGGAAATCTTCGTG
ACGACTTCGCAAGTCTCACAATCATCAACAAACAGGGCAGGGAGGTTGAA
CGTCATGTACAACTGACTAACCAGCAAGTTTGCGTGAAGCATTACGGCAT
GGAAGTCAAGTTCTATTGCCCCAGCTGTGAGGAAGTTATTTGTGGAGAGT
GTATTGTTGATGAACACAACACACATGGGGTCACCAGGCTTTCCAAGGCT
CTAGAGAAGCAAGCCGAAGAAGCCAAAGAACTCATGGGCGAGGGAAAGAG
ATGGATTGAACAAGTGAGAGGAAAGATCACAGAAACAGAAGAAGCAAGAA
AGATGTTGAAGTTTGAGGAAGAGACACAATGTTTGTTAGTGAACAAAAGT
GCAGCCTGTCTGAAAAAGGTGCTAACAGAATCTGTGGATAAACGTGCAAC
CGACATTAAGGAAGAGTTGAACGCTTTGTTTGCGTTGAAGCGTGTAGCTC
TAACAAACTGTAAGGAAGAACTGGAAACGTTGCTGGCAACCTTGCTAAAT
GGTGTGGAGGAAGTTGACCGGTGTATCGCCTCGGAAGAAACCATTCCTTT
GATTAGGGGGAGGAAGGTGTTACAGGAAGTGATCCAACCGTTGCCAGGAA
GGACATTGTTGTTGGGGGGCGAACAGGACAGCTCACCATTTTTCGCGCCT
AGTCTTTTCGATGTGCCAGCAGTTTCGCTTGGAACTGTGCGCAGTGCCAA
GAAGCCTGGCACCAGTCCTCCGAAGATGACTGCATATTCATTTGGGGCTG
TCCAAAATGCTAGACCATCTAGTACCAGTCCGCCCAACCTGCTTGCATGT
CCACTTAGAACAGTCCAAAATGCTCCAAACTCTAGTAACAGTCCTCTCAA
TATGTCTGCACGGCCCCGTAGAACAGTCCAAAGTGACATGTTTTCATCTA
GAACAGTTCAGAGTGCAAGGAAGCCTGTTGTCTCCAAGTCTCCGGAGACA
ACCAGTGCAGTGGAGGAGTTCATACAGAGTGTACAACGACTTAAAGATGT
CCAGGCAATGTCTTACTGTCCTATGTAGCAGTTACTTGGCTGAAATTAGA
TGTTCTTTTTTTTCTGAATATTTTGATGCACAACTTTCCTTTATTCAGTT
ATTGAAACACTAGTAACAACTAGCAAACCTGGCGATAAAGTTTGAAGAAA
AAAAATGTTAGCTGAGAGAGCAGTATGTTATCAGAACACACATGAACATG
CACACATGAACATGCACACATGAACATGCACACATATACATACACACATA
TACATACACATGTAAACACATGTACAAGCATGCACGCACAAATACAAACA
TACAGTATGGCCTCCGTCGGTCAGTATTGACCATGGTAAAATCCTACTTC
ACAACAGCCCTACAGCATCGACTATGGCTAAACAGCCCTATACGAGAATG
GCAGTATGACAAACATACACACCTATGCAAACATGAACACGTACCTACAG
AAACATGCGCACACACACACACACACACTGACAGCAATGCGAACATTTGC
ACAAACACACACATACACCTACTAGTATGCAAATGCACGCACACAAACAC
CTGCAAATGCACACACACATACAGATGCACACACATGTACATGTACATGC
ACACATGCGCAAACACACACACCTACTCAAACACTGCCTGCAAAGCTGGT
GTGGGGGTTATGCAGATACATATACAGAAGAGCTACATGTATAACTACTT
AATAATCATCTATCACTATAGTATTAGTTTGATTTTTCAATACTCTTTGT
TCCTGTTTATATACATACTCTTGTTGGTGTAGTCTTCTTCTGACACTAAT
AGCTGACTGTCTAAAATGATATCTTACTATTTTGTATTATTCATGTGTTC
ACTTTATGTGATTTTGCAGGTCCTGTTACAGGAACGAGCTACTTCTGATG
AGGTGCCATCGCCACCATCATGGATGCCAAACCACCCTTCAGCTATAAGG
ACACACACACCACAACCACTGGCACAGCCAAAGCCAGCACGGAAGGAAAG
GACAGAACAGCAACAGCCAGCTGTCTTCAGGGCACGGCAGGTAATATTAA
GGTCAATGTCTCCAGTTTGGAGCTTAGAACCCTACACTTATTGTCTGCAT
CTGTATTGCAAAGTTGGTATGATCACCCTTAAGGCAAGTTCAGTGAAGCA
CACCAACTTCATGTAATACATGTAGGCATGATCATTGGCCTGCTGTGTTG
GACTTCTAAGGGGAAACTTGGTGCTGCATTGTCTATGCAAAGACTACCTT
TTCTGGAACTGTACACAGTTTCTTTGTGTGTGTGGGGGGGGGGGGGCAAG
CAATGCAACAATATACAGTACTATCTCCTTTATGTAATCTCAAAAAGGAT
GTCTCTGCACAGATATTGTACATCTTTGAGACATGTCTATGTTTTTGAGT
AACAAGCTTTACAATTGGCCTTTTGTACAATGGTCAATTTTTCCTGCAAA
AAATGTTCAAGAGCAGGCCTTTGATTTACACTATATGTTGTTGTATTCGA
CCATCCTTTCATGTGGTTGTCCTAGGAATTGTCTACACTGTTTAATTTAC
ACTAACGTATCATGACCTATTTACGTGCAGAACCTATTTACGTCCGGTTT
GGCTCATGTCCACATGTCGCGGTGTATTATGCCAAAGCCTGTTCTCANTA
ACGTAACATGACCTATTTACGTGCAGAACCTATTTACGTCCGGTTTGGCT
CATGTCCACATGTCGCGGTGTATTATGCCAAAGCCTGTTCTCATGAGCAA
TAAAGAACATCATAAGTATGATCCTTAGCCATCTCTTTAATTTTTGCACA
GCAAAACATAATGGCCATGCGTTTACCACGTGAACGCCACGTGCCGCGCA
TGTGGGGGAAATTTACAGATAAACATTGTTTTTTTCCATCGCGTTAAGCA
AGTGGCCGGACAGACATAGTGATTTTACTATCATTTGTCTGCAGACTACT
TTGGACAGTCACTGTGCATTTTTTTCTGGTCAATGTTCTTCAAGCATAGC
GCTAGAAGGGAAAAGATTCAGAAGTGGACGATAATGGGTTACCCTAGCAC
AATTCTTCATCATATACCTCAGTATAAATACATGCTCGCACGGCATTAAA
CAGGCGGAGAAAAACTTACAGACCATGCATTTTCTTTTTAGAAGAGCTGA
TATTTCTGCCCATGGGTTTGAAATTTGGCTCTGTCCGCGCGGTTTTAAGA
TAAATACGTTTTGAATAAATTGGACGTTAACTGGTCACCTTACGTTATAT
GTTGTTGTATTTGACCATCCTTTCATGTGGTTGTCCTAGGAATTGTCTAC
ACTGTTGCAGGGGCAAGGGCCGCGCCGTCAGCTACATGTTAAGAGAGGTA
CCAAGAAGGTCGTCAAGCCCAAGGACGCCGTCGCAAAGAGCCTCATTTCC
GAGGTTCCTCGTAGGGGTAACGGAAATGGAGGCAGTGAACCCATCCCACC
CAACTCAGACAGTTCTGATGCCAGCAACTCCCAGGTTGGTACTCACTTAT
TTTCACCTCAGTGCATGGAGGCTTTGTTTTCGGGGTGTCAGTTTGATACG
TTGATGAAGGTTAGACATCCAGGTAGTAAGATACACCAAAAATAGTTACT
GGATAAAATTTCGAAACAGTCAGACTCTTCAGACAGCATCCGCTATCTTT
CGTCAGTGACTAATATATCTTTGTCTGTTTGTTTGTTAGTTTGTGTGTCC
GTAGTTACAAATGGCAGGAACATGGTGTCACCACAGACTGACGGGAAGTG
AAGGTCAAAATTGGAAGTCAAAATACCCCCCCCCCCCTGATAAGGTTTGC
TTGCAACTTTTGAACACATGTCAACATGATGCTGAAGGAGATCATGTATA
ACCAACCCCCACCCACCCCTGTGACACAAGCAGCTTGGTGGTTTGCAAAA
CTATGAAGTTGTCTACTGATGTGTTACTTAAATTTTAAAGAAGGTCTAGG
ACATGCACTGCAAAGAAACTGTTAAATGCCAATTTAAAGCATCAAAATTG
GTATCACAGCCAACAAGTCTTTTATTCCTATGTTCTAGAAAGCGACACTA
GTGTGGTAGCCTATTATCACTGCAACTACATTTGTACACTTAAGGCTGCC
ACACTGGTGTCACTTCTACAACTGCTGAATTAGTTTCACTTCTACAACTA
CATTCCTGGCTACTACACAAGATATTTTCCCATATTTCTGAACATAGCCG
AAGGAGAACAAAATTTTTTATTTTTTTAAGCCAGCCGAAAATTAATGCGT
GTAAGATATCATTGATAGATTGTACTTGCTGTGGCCTAACCTGTGCTTTT
TTATCTTTTATGTTTAGACCGATGCAATGCCTATCGTTGCTGAGAGTTCT
GTTCAGGACTCAAGCGCCAGTGCTAAAGTGTCTGCTTCTTCTGAGGGTGC
TGCAGCTACGTTCAAATTCGATGATGCCAATGGAAACAGTAGTGATTTGG
ATATCTAGCCTTCGTTCCCTGATGTCTTAACCTGTCAGTTGTCAGACTCT
TTGCTAGATAACACTAAGAACTAATTAGGTAATTAAGGGTCCTTCTCCTC
ATGCATACTTAGTTCAAATTGTGAACTGCCTTATAAGCTTATTATGGTGC
CATGCATTGATCCAAATATGAGTGTGATACTTTTCTACATACTTGGTCCC
TTGATCATTTGTTGCTTCTCTTTACAATATACAAGTAATATACAAGAGAT
TATACTTATAAATACTATATATGACATTTACCTGCCATATTACATATATC
TGCCACTTTGAAAACCAGTTGGTTAAGATCTCTAATGCAGCACCCCCCCT
CAAAGTATGCACAGTTTAGATATACAGGACTTAATTATTCTCAGGGACCT
TGCATTGGAGATCACTTTAGACAGTTTTCCAGTTGCTGGGTGTATGTGAG
CTTGTGAAATCATATATGTTAGTACACATTTACAGTGAAATAACAAATCT
GGACACTGTTCAAGAGTTCTATGATTTATGAAGTCGTTGGATATTTGATG
TTTTACACATTATATAGCAATCATCATCAGAAGATCATAATTAGTCATGT
TCATGTTATTCCACACAAATTAAAATTCTATTCTTGTTACATGTCTTGAT
CATGATGTATCTGTTTGCGTTTATGTGGTATATGAAATTGAAGAAACAAG
ATTTCCTATGTGTGATATATAGCTATGTTCAGGCGTGAGTATGCTACAAA
GGGCATTTTTTTATGTCCTTGATGACACTAGCTACTGCATGGTGTGAAAA
CAAGCCAAAATGTTGGTAACAGCATAGTTAA Coding sequence (CDS) from alignment at Sc0000301:86586..92466- >Blg00623.19 ID=Blg00623.19|Name=Blg00623.19|organism=Branchiostoma lanceolatum|type=CDS|length=1773bp|location=Sequence derived from alignment at Sc0000301:86586..92466- (Branchiostoma lanceolatum)
ATGGCGGAAGCATCATCAGAAGGAGGAGAAGGAGAGAGTCCATCACTCGA
TCGAAGCCTGCAGATGAACATGTTCGACTGCAGCATCTGTCTGCAGATGT
TCACCCGGCCCAAGGTGCTGCCGTGCGGACACACGTTCTGTAAGGACTGC
CTGGTAACGTACGTTAAAGGCGGCTGGTCCTGCAAATGCCCCACATGCAA
AAGACCCGCGTACCTAAACGGAAAGAAAGGCTCAGAGGGAGTGGAGAGTT
TAACGGATAACATTTCCTTAGGAAATCTTCGTGACGACTTCGCAAGTCTC
ACAATCATCAACAAACAGGGCAGGGAGGTTGAACGTCATGTACAACTGAC
TAACCAGCAAGTTTGCGTGAAGCATTACGGCATGGAAGTCAAGTTCTATT
GCCCCAGCTGTGAGGAAGTTATTTGTGGAGAGTGTATTGTTGATGAACAC
AACACACATGGGGTCACCAGGCTTTCCAAGGCTCTAGAGAAGCAAGCCGA
AGAAGCCAAAGAACTCATGGGCGAGGGAAAGAGATGGATTGAACAAGTGA
GAGGAAAGATCACAGAAACAGAAGAAGCAAGAAAGATGTTGAAGTTTGAG
GAAGAGACACAATGTTTGTTAGTGAACAAAAGTGCAGCCTGTCTGAAAAA
GGTGCTAACAGAATCTGTGGATAAACGTGCAACCGACATTAAGGAAGAGT
TGAACGCTTTGTTTGCGTTGAAGCGTGTAGCTCTAACAAACTGTAAGGAA
GAACTGGAAACGTTGCTGGCAACCTTGCTAAATGGTGTGGAGGAAGTTGA
CCGGTGTATCGCCTCGGAAGAAACCATTCCTTTGATTAGGGGGAGGAAGG
TGTTACAGGAAGTGATCCAACCGTTGCCAGGAAGGACATTGTTGTTGGGG
GGCGAACAGGACAGCTCACCATTTTTCGCGCCTAGTCTTTTCGATGTGCC
AGCAGTTTCGCTTGGAACTGTGCGCAGTGCCAAGAAGCCTGGCACCAGTC
CTCCGAAGATGACTGCATATTCATTTGGGGCTGTCCAAAATGCTAGACCA
TCTAGTACCAGTCCGCCCAACCTGCTTGCATGTCCACTTAGAACAGTCCA
AAATGCTCCAAACTCTAGTAACAGTCCTCTCAATATGTCTGCACGGCCCC
GTAGAACAGTCCAAAGTGACATGTTTTCATCTAGAACAGTTCAGAGTGCA
AGGAAGCCTGTTGTCTCCAAGTCTCCGGAGACAACCAGTGCAGTGGAGGA
GTTCATACAGAGTGTACAACGACTTAAAGATGTCCAGGTCCTGTTACAGG
AACGAGCTACTTCTGATGAGGTGCCATCGCCACCATCATGGATGCCAAAC
CACCCTTCAGCTATAAGGACACACACACCACAACCACTGGCACAGCCAAA
GCCAGCACGGAAGGAAAGGACAGAACAGCAACAGCCAGCTGTCTTCAGGG
CACGGCAGGGGCAAGGGCCGCGCCGTCAGCTACATGTTAAGAGAGGTACC
AAGAAGGTCGTCAAGCCCAAGGACGCCGTCGCAAAGAGCCTCATTTCCGA
GGTTCCTCGTAGGGGTAACGGAAATGGAGGCAGTGAACCCATCCCACCCA
ACTCAGACAGTTCTGATGCCAGCAACTCCCAGACCGATGCAATGCCTATC
GTTGCTGAGAGTTCTGTTCAGGACTCAAGCGCCAGTGCTAAAGTGTCTGC
TTCTTCTGAGGGTGCTGCAGCTACGTTCAAATTCGATGATGCCAATGGAA
ACAGTAGTGATTTGGATATCTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg00623.19-exon-Sc0000301-1570713199:90863..92466 | Blg00623.19-exon-Sc0000301-1570713199:90863..92466 | Branchiostoma lanceolatum | exon |
| Blg00623.19-exon-Sc0000301-1570713199:89827..89997 | Blg00623.19-exon-Sc0000301-1570713199:89827..89997 | Branchiostoma lanceolatum | exon |
| Blg00623.19-exon-Sc0000301-1570713199:88383..88556 | Blg00623.19-exon-Sc0000301-1570713199:88383..88556 | Branchiostoma lanceolatum | exon |
| Blg00623.19-exon-Sc0000301-1570713199:86586..87549 | Blg00623.19-exon-Sc0000301-1570713199:86586..87549 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000301 | genome | Sc0000301:86586..92466 - |
Properties
| Property Name | Value |
|---|
| GeneID | Blg00623 |
|
