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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000301:76002..81621+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg00616.1 ID=Blg00616.1|Name=Blg00616.1|organism=Branchiostoma lanceolatum|type=mRNA|length=5620bp|location=Sequence derived from alignment at Sc0000301:76002..81621+ (Branchiostoma lanceolatum)
TACAATCAGGAAGTACGTGGTAAGGAACATTAGATGTCGGCTGGTCCTGA
CGAAACATTTCTCAACAGGTGAGTTAGTCTTATATCCCTGTATGTACCTG
TCATTTGTACTGCTCATGGCTTGTCAGAAGACAACGTCATGGTTCAGAAG
TTACACATACTTTTAGAGTACCTCTCTTGGTCTTACATTCGCTTCGCGGG
TTGTTGTTGTCGTCATGTTCATAAACAGGAGGACGTACATAGTACTATTG
TTGTTTATTTCAGACTTGAGGCGCTTAGCTGTTGATTATGACCTCGTAGC
CTAAACCGTGAAGAAACTAGTGGTCTAAAACTTAGATAAGTTTGAACTGT
CGTGGTATGTCTCAAACGGTTAATACCTGGTGTATGTGTTTCCTTCGTCA
TGAGTATAACAATATGATTAATCTTGAGACTCTTATGAAGTAATAAGCTA
ATCATACAGAAATGAGAAACATATAAAAGCCGGAACTAAAGCTGATTTTT
CTCTGTCCTTTCCTACTTCGACGCCCTTTTTGTCACAAGTTAACCATTAA
ACCTAAGGTCATCTTAGGTCAACCTCTCAGAACAGGGGGCTCTACAAAGG
GTTCTTATACGACATGGAAATAAACACCATTGCATCGACCGATTTCTAAT
GAGGCGCTTCCTTTCCTGTTTATCGAAATACCCTGCACTTAGTCTAGCTG
TAAATTCACATCTTACATGTATTTGCAGCGAGAAAACCTCTGGTGCAAAC
ATGAGCTACGGAGCGACACCGGCGCCCCCTGGCTATGACAACCCGAACTA
CACCTACCAGAGCATGGCTAGCGCCCCCCAACACACCATTGTGGGACCGC
AGGCTTTTGTCGAGTCCGACCGATTGATCCAGCTGCATCGTGCCCAACAT
GCCCAACAGTCTTTGGGAGACGATGACGAAGATATGGACATCTACAGTAC
AAAGGGGCATGTCAAGGTTGGTAAAAGGGAATTCTATATAAACAAAGGAA
AAAATAAGAGACTATACTTTAAAATCCACTAGCCATTATGTGTCTATGCT
GTCTAACAATCTCAGGCTATATATAAGAGGTCGAACCTCAAACTGAGGAC
GTTTCTTTTCATCAGCTAGTAGTGCCATGCGGCTTCATTACTACAACTTG
CGTATTTTGCCAAGCACACCGGGTCATCCTAGCTCTTCTCGATAAGTGTG
TTCTTTTGCCTGAAGCTCCCTCACACACGGGGTCACCGGCTCTACATATA
CCGTAATATAAAGTAAAGAACCTTTCCCGATTCGTTTTCACAGGTCACCT
TTGACGAGATCTTCAACGAGCCGCAGAATGTGACAAGTTGGGGGCCTATT
CGAACTGTAAACTCTGTTGTCTTCGAGTACACACAGGTAACGTATACGTG
TTTGCAGCGAGAGACGTGTTACCTTAACTAACAAATACCTGCTACGTTTC
TGTGCATTTTCTTCATTAAGAAGGAAACGCCGACATCTTATCAAAAGCAT
CCAACATCAACAAGCAAATGCAGGATATTTCGTCCCCATCTAAGGTCCAC
CTGGGAGCATAACATGCGTATCTGTTGAGCTCGCTCTTGTTCTCTTGAAT
AGTGCGTCCTCTAGCGATATAAAACCAAACTGTAGCATGCATTCACTGCG
CGCATTGGTAGGCCTCTTTTTCCCGCTCATATTCAAAAGAACACAGTGCT
CAACATACATAACCGTGACTGTGTAATTCATCTCCACAGGGTGGACTGTA
CAAAGTGCTATCCGCTGGTTTGGGGGTGATACTGGCCGTTCTGTGGGGCC
TAGCGTTCGGCCTCTTCAACTTCTTCATCGTGTGGTTTGTCCACCCCTGG
CTGAAGATGTGCTTCATGGGCATACGGCTCTTCGGTCTGACCATCAAGGC
CATCGTCCGCGCGTGCATTGACCCGTGCTTCCAGTCCATGGGCCTGTCTC
TCAGCTCCATCGCCGGCAGGTTCAGCCTCAAGCTGTCCGGCATCCCGGGA
CCGAGAGCGGACCCAGAGAACGCAATTCAAAACAACCAATGAGAGAAGAA
GAGCGGCTGTACATCTTCTCGTTCCGAAGAAAATATTCAGATGTATTCTT
TTCAAACATACTCAGAATTCAGGATTCATCCTCTTGCACGTAGTGCGTAG
AGCCATACATACTACACGTACTTAATCACGTATGCTTGGGCGGCGTACAC
TGAAGGTATATACTAAGAATAACATTTTCTCCTTTGTTTCTAGTTAGTCT
TATCTTGAGGATACCTTGGGGATGAATAGGTGAAGAAGGCAGCACACCTG
TTGTTATCATCCTCGTCTTAGTCTTTATATTTGCACTGCAAGAATCTAAT
AGGCACGGTTGAATTGGAAATACTAATGTAGCAGTTTTGTTATGTCATCA
TTTCGAGCTCTCTGTACCAGTAAATTTGTGTCCATGTATGTTTTTGATCT
ACTAGTTGGGCAGCCTTGTTACCTCATTTGCTGAGAATGCTTAATTAAGA
TTTTTGTCACCAGCTAATAGTTGGGAATAAACGCGTTTTTGTGAGAACCG
TAAGTTTAGCACAGCGACAACGGTTTCCACTTTTTTGTAGTGTAAGCAAA
ACTCCTCCGGCGACCGAGGCAATAGGAAACGCCGCAGAAAAACAAGTCCC
GAAAAATATACAAGTTCTGATTAGCATGATATTAGGACAACGGTTGTAAG
ACGTCCAGGTTGGGGTGGGTTCTCACATCGGGTGTTCAGAGTATATCTTG
TAAATGCGAATCACAAGGGACCGCTCATTTACTAAAAGCCCTTCACGAAC
ATTGTCTTTATTACCTATCGGTGTATTTAGCATTGTATGTCTTGCTACAA
TGCTGGAATACGTGTCTTATCTTTTAAATGCCTCTTTAGCAGCCTTATCC
AGGTAGCGCTACAAGCAAATGCTGTTAAGGTACTTAAGGGTGAACTTAAC
GGGAGGCGGTTACTTCCGTTCATTGAACCCAAGTCACGAGGTTACAACGC
GGAAGTAAGTTGTTGTCGGTAACATTAAATGTCGGCTGGTCCTGACGAAA
CATTTCTCAACAGGTGAGTTAGTCTTATACACCTGTATGTACCTGTCATT
TGTACTGCTCATAGCTTGTCAGAATACAACGTCATTGTTCAGAACTGTTA
CACATACTTTCAGCGTACAACTCTTTGTCTTATATTCGCCTCGCGATTTG
TTGTCGTCATGTTCATAAACAGGAGGAAGTACAGTGTACTGTGATTGTTA
TATATTTCAGCCATGAGGCCTTTAGCTGTTGATTATGACTTCGTAGCCTA
TACCGTGAAGAAACTAGTGATCTAAAACTTAGATAAGTTTGAACTATCGT
GGTATGTCTCAAACGGTTATACCTGGTGTGTTTGTGTTGGGGGGCGTTTC
AAGTAGCATCCGCTACGAAAAGTAGTGGATGCTACTTGAAACGTCTGACC
GTTTCCAAAATCATATCCAGTTGTTCGAGTAATTGCTTTTTTAGTTATAC
CTGGTGTATGTGTTTTCTTCGTCATGAGTCTAACAATATGTTTAATCTTG
AGACTCTTATGAAGTAATAAGCTAATTATACAGAAATGATAAACATATGA
AAAACGGCTATCAACGGTATCTATACAACTAAAGCTCATTTTCCCCTGTC
CTTTCATACTTCGACGCCCTTTTTGTCAAGGGTTAACCATTAAACCTAAG
GTCATCTTAGGTCAACCTCTCAGAACAGGGGGCTCTAGAAAGGGTTCTTA
TACGACATGGAAATAAACACCATTGCATCATGACCGATTTCTAATGAGGC
GCTTTCTTTCCTGTTTATCGATATACCCTGCACTTAGTCTAGCTGTAAAT
TCACATCTAACATGTATTTGCAGCGAGAAAACCTCTGGTGCAAACATGAG
CTACGGAGCGACACCGGCGCCCCCTGGCTATGACAACCCGAACTACACCT
ACCAGAGCATGGCTAGCGACGCCCCCCAACACACAATTGTGGGACCGCAG
GCTTTTGTCGAGTCCGACCGATTGATCCAGCTGCATCGTGCCCAACATGC
CCAACATTCTTTGGGAGACGATGACGAAGATATGGACATCTACAACATCT
ACAGTACAAAGGGGCATGTCAAGGTGGGTAAATTCTATACAAACAAAGGA
AAAAATGAGAGACATACTCACAGTGAAATCCACTTGCCATCATGTGTATC
TACGGTGTCTAACAATCTCAGGATATATATAAGCGGTCGAACCTCAAACT
GAGGACACTTTTTCATTAGCTAGACTAAGTGCAATGCGGCTTCATTACTA
CAACTTGCGTATTTAGCCAAGCACACCGGGTCATCCCAGCTTATCTCGAT
AAGTGTGCTGGGTTCTTTTACGTGCTTTTGCCTGACGCTCCCTCACACAC
CGGCTCTACATATACCGTGATATTAAGTAACTAACCTTCCCCGATTCGTT
TCACAGGTCACCTTTGACGAGATCTTCAACGAGCCGCAGAATGTGACAAG
TTGGGGGCCTATTCGAACTGCAAACTCTGTTGTCTTCGAGTACACACAGG
TAACGTATATGTATTTGCAGCGAGAGACGTGTTACCTTTGCTAACAAATA
CCTGCTACGTTTCTGTGCATTTTCTTCATCAAGATCTTATTACAAGCACC
CAACATTGGCTAGCAAATGCATGATATTTTCGTGCCCATCTTGGGTCCTT
CTGGGAGCATAACAAGCGTATCTGTTGAGCTCGCTCTTGTTCTCTTGCGC
GGTTCGTCTTCTGGCAATATAAGGCCAAACTGTAGCATTCACCGCGCGAG
ATGGTAGGCCTCTTTTCTCCCGTTCATATTGAAAAGAATAGTGTTCAACG
CACATACCCCTGACTATCTATTTTGTCTCCACAGGGTGGACTCTACAAAG
TGCTATCCGCTGGTTTGGGGGTGATACTGGCCGTTCTGTGGGGTCTGATG
TTCGGCCTCTTCAACTTCTTCATCGTGTGGTTTGTCCACCCCTGGTTGAA
GATGTGCTTCATGGGCATAAGGCTCTTCGGTCTGACCATCAAGGCCATCG
TCCGCGTGTGGCTTGACCCGTGCTTCCAGTCCATGGGTCTGTCTCTCAGC
TCCATCGCCGGCAGGTTCAGCCTCAAGCTGTCCGGCATCCCGGGACCGAG
AGCGGACCCAGAGAACGCGATTCAAAACAACCAATGAGAAAAGAAGAGCA
GCTGTACATCTTCTCGTTCCCAAGAAAATATTCAGATGTATTCTTTGCAA
ACATACTACTTAATGTACTAAAACACGTTTGTAAATGCTTGGACGGCGTA
CACTAAAGGTATATACTAAGAATAACATTTTTCTCCTTTGCTTCTAGCTA
GTCTTACCTTGAGGATACTTTGAGGATGAATAGGTGTCATCCTCGTCTCA
GTCTTTATATTGGCACTGTAAGGATCCAATAGGCACGGCTAAATTGGAAT
ACTAATGTAGCAATTTTGTTATGTCATCATTTCGAGTTCTCTGTAAACTT
GTGTCCATGTATGTTTTTGATGTACTAGTTGGGCAGCCTTTTTCCGTACC
TCATTTGCTGAGAATGCTTAATTAAGATTTTTGTCATCAGCTAACAGTTT
GCAATAAACGCGTTTTTGTG Coding sequence (CDS) from alignment at Sc0000301:76002..81621+ >Blg00616.1 ID=Blg00616.1|Name=Blg00616.1|organism=Branchiostoma lanceolatum|type=CDS|length=669bp|location=Sequence derived from alignment at Sc0000301:76002..81621+ (Branchiostoma lanceolatum)
ATGTCGGCTGGTCCTGACGAAACATTTCTCAACAGCGAGAAAACCTCTGG
TGCAAACATGAGCTACGGAGCGACACCGGCGCCCCCTGGCTATGACAACC
CGAACTACACCTACCAGAGCATGGCTAGCGCCCCCCAACACACCATTGTG
GGACCGCAGGCTTTTGTCGAGTCCGACCGATTGATCCAGCTGCATCGTGC
CCAACATGCCCAACAGTCTTTGGGAGACGATGACGAAGATATGGACATCT
ACAGTACAAAGGGGCATGTCAAGGTCACCTTTGACGAGATCTTCAACGAG
CCGCAGAATGTGACAAGTTGGGGGCCTATTCGAACTGTAAACTCTGTTGT
CTTCGAGTACACACAGGGTGGACTGTACAAAGTGCTATCCGCTGGTTTGG
GGGTGATACTGGCCGTTCTGTGGGGCCTAGCGTTCGGCCTCTTCAACTTC
TTCATCGTGTGGTTTGTCCACCCCTGGCTGAAGATGTGCTTCATGGGCAT
ACGGCTCTTCGGTCTGACCATCAAGGCCATCGTCCGCGTGTGGCTTGACC
CGTGCTTCCAGTCCATGGGTCTGTCTCTCAGCTCCATCGCCGGCAGGTTC
AGCCTCAAGCTGTCCGGCATCCCGGGACCGAGAGCGGACCCAGAGAACGC
GATTCAAAACAACCAATGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg00616.1-exon-Sc0000301-1570713199:76002..76069 | Blg00616.1-exon-Sc0000301-1570713199:76002..76069 | Branchiostoma lanceolatum | exon |
| Blg00616.1-exon-Sc0000301-1570713199:76730..76967 | Blg00616.1-exon-Sc0000301-1570713199:76730..76967 | Branchiostoma lanceolatum | exon |
| Blg00616.1-exon-Sc0000301-1570713199:77295..77387 | Blg00616.1-exon-Sc0000301-1570713199:77295..77387 | Branchiostoma lanceolatum | exon |
| Blg00616.1-exon-Sc0000301-1570713199:77741..77877 | Blg00616.1-exon-Sc0000301-1570713199:77741..77877 | Branchiostoma lanceolatum | exon |
| Blg00616.1-exon-Sc0000301-1570713199:81023..81621 | Blg00616.1-exon-Sc0000301-1570713199:81023..81621 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000301 | genome | Sc0000301:76002..81621 + |
Properties
| Property Name | Value |
|---|
| GeneID | Blg00616 |
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