Blg00607.0 (mRNA) - B. lanceolatum

Overview
NameBlg00607.0
Unique NameBlg00607.0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at xfSc0001241:1..3180+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg00607.0 ID=Blg00607.0|Name=Blg00607.0|organism=Branchiostoma lanceolatum|type=mRNA|length=3180bp|location=Sequence derived from alignment at xfSc0001241:1..3180+ (Branchiostoma lanceolatum)
CAAGCCAATTATCTGGGTTGTCTGAGGGTAAATTATCTGGTATGAGTCAA TTAAAGTGTGTGGTGTGAAAAGGTAAGATGATTACAAGGACTGAACTAAC TACAGGGGGGATGATGATGATACTGAACTGCAGTTACTGCCGTGACTGTC ATTACCATATTATAAGGTAGTTCCAGAAATAAAATTGGAGGGCAACATGG TATAGCAAAGAAGCCTGTCATTTACTGAGGAATAATGCCTCAGCCATCTG TATCAGCTCAGGTAGATCAAAGTCTGTGCATTTCAATAGAAGACTAGAAG CTGAGTCAGATATTTTTGTATTACAGTTTCTTCAGACACTTTGCCATGCC CAAAGGCATCGCTGGAAAGTGCCAAACTTGACTGACCTGAAGAGACCACA GTAACACGATGTCTGAACCAGAGAGGATCGATGGCATGACCCTGCTCATG CAGGCTTGCCTAGAGGGAAACACCAAGGCAGTACAAGCCATCTTACAGAA ACAGGTAGGTTTGGAGCCACATGGATGAATTACCACAAAATCTAAAGACA GACCAGAAAGGATGGTTCATGGGTGAAGCATTTGAAAATATTAATGGAGT AAACTTTGGATAATTGTTTTATGAAATACATTTTGTATTATACTTTGAAT GTCTGACAGTTGGGTTTTCAAATCTGTTGTAAATGGAGTACAAATGAGAC CCCAGGACAACAGTAATGGATTTTTTCTCCCACAGCCTTCCAGCGTGCAA GAGAAAGACTCCTTTGGCAAAACCCCGCTCCACTACACTGTAGAGAACAC CCATGCTGACTGCACTTCTGTCCTGCTTGCTGCAAACCCCAGACTAGTCA ATGTACAAGATGGTAATGGGTACGCAGCGCTGCATTTTGCAGCGATGGCA GGGAACACGGTGGTTCTGGAGAGACTGATGCAGTCTCCGGATGTGAATGT CAACATTGAGGACAATGAGAAACACACCCCTGTCCATTGGGCAACAGGTA TGCACCACTTCTTGCCATATTCCTGATCTATGGTCATCCAAACACCTTTT CTGTATTCTTTTACCAAATGATTTTTTCACAGTCTGTCCACTGACGATTT AAACTGTTTGTGCCAATTCAGTTTGTGGGCATCCAAAGTGCATTGAGCTG CTGGTTCAACACAATGCAACTGCGGAGACTGCTGACGTCCACGGAGCCTT CCCGCTGCACTACGCAGCTCAGATGTGTGGGACGGAGTACGAGGTACCCG GTATCGGCATGCACTGCCTCTCCAAGCTGGTACAGAGCAGGGCGGATGTT AACTGTGTGGACGGCAGCAGAAGAACACCTTTGCTATGGGCTGCAAGTGC AGGTACAGGAACACAGCTCTTGGTCAAGTCTTCGTTGTTATAGTCTCATT GCTCATTTGTTTATAGTATCAATTAGCAGTTTATCAATATTTCTGTTTGG TGCAGATTGTAGCAACTTATCACGTAATACCCGACAAATATGCTTAGTTA CTCATAAGACAGACAAACTGCGTGAATTCTATCCCTCCTTGCTATAAAAT AGACTATATTCATAACATACTTTTAAAAGCACTATAAATAAAGATATTTT AAGTTAATGTCCCCTCATACATATTTGCTTTAAAAGGAGAAATATGTTCA TCCCTTCCGTTACCTGTGTTGAGAGTACATACGGTTGCAATGTATTTTAG CTGAGGACTGCATCCCTTTATTGACAACAGAGCGGCCAAACAAACAGGAA CAGAAGCAACAACAGTTGTCTCCAGGCTAAAATAAGTGTAAAATAGGCAC ATATGGGTAAAATAAACACCACTTTTCTACTCATTTGACTGTCTGAAAAA AATGTTATTTTCTATCGATCCAGGCAGTGCCGAAGCCTGTCTGACGTTGT TCAAGGCTAGGGCTGACCCCAAGTCTTCTGACAAGGACGGTCTGACGGCG CTCCACTGTGCAGCCAGCCGGGGCCATCTCCAGTGCTGTGATGTGCTGAT CTCCCGGTGTGGCTGTCCAGTGGACAGTCTGGACAAGAACCAGTGCACGC CGCTGTTCTACGCAATATCGTTTGGGCATGGAAAATGTACATCTCTTCTC CTAGATAAGGGCGCATCACCAAACCACCAGGACACCAAGGGGAGGAGGTA AGATGTCAGCTTTGTGGGATGAGTCTGACCTCTGAGCAGATAATGGGTGT TTTGGCTCAATTTTGCACAGCATTTGCAGGTGGTTAAGTGAGTAGTAAGG GGGTTAATGAAAAATTTTACAACCTGGAATACTGCGCCAAAGTGCCACAT ATCTGCTTAGAGAAGTTTCCTATCAACAACACACAGGTTTGATTTCCCTA AGCACAGAATTCATCATGGCTATTTTTGCCTAATGAAATTTTTAATACAA TGTACCTTAGGGAGTAGTAGACTAATGGTTTTCTAGATACATTTATTACC ATCCTATCTTTTTGCATGCCATGTTAGGATGTTACAGTTGTAAGAGACAG ACTTAAAGAGTAAAACAAAGCACTGTTACTTACCTGGAACAGCACAAAAA TACCTGACTACAAAAGGACCGACAGAGATATGCAGACAGCTTTCACACTT TTCCCCCTGAGGAATCAACTTCAATATTCAAACAATAGCAGTGGTATCAC ATTCCTTTGTCCGGAATTCACAATGAATAAGATAAACAGTATGTTTGACA AGAGAAAGTTGCCCTTTAAAGGACAAACTTTTGTTTGAGGTTATTGTCAT GGGATACCTTTTGTCTTATAAGGAGACTGTGTTAAAGCATACTTGACACA GTCTAGATCTAGACAGTGAAATTAAAGTATGCCTAGTATTGTTTCCGGTG GTAACGTCTGAGGTTAAAACTCAAATATCGCGATGGAGTCCACCTGGAGG AGGCTGCGTTCTGTCTTTATGGCAGTCTTCACACGAAAAAGGTAATTTTT TCTGTGATGGAGTACTCATTTAGGCATTTTTTGCTCTAAAAGGTTGATTA TTCATCCAAGGTAAAGTGGCCATTAAACCCATTGTTTCTTTTAGCTTGAT ATCTTTTCTTCGGGTGCTTTGTAATTCCAACAGCAAAATAGAACCAAATG AATTGAAATCAGTGTGAAAAAATGTTTTCAACTGTGAATGGTAGACTTTA TGACTCACTAAGTCTGGGGTGCTCTGTCTG

Coding sequence (CDS) from alignment at xfSc0001241:1..3180+

>Blg00607.0 ID=Blg00607.0|Name=Blg00607.0|organism=Branchiostoma lanceolatum|type=CDS|length=867bp|location=Sequence derived from alignment at xfSc0001241:1..3180+ (Branchiostoma lanceolatum)
ATGTCTGAACCAGAGAGGATCGATGGCATGACCCTGCTCATGCAGGCTTG
CCTAGAGGGAAACACCAAGGCAGTACAAGCCATCTTACAGAAACAGCCTT
CCAGCGTGCAAGAGAAAGACTCCTTTGGCAAAACCCCGCTCCACTACACT
GTAGAGAACACCCATGCTGACTGCACTTCTGTCCTGCTTGCTGCAAACCC
CAGACTAGTCAATGTACAAGATGGTAATGGGTACGCAGCGCTGCATTTTG
CAGCGATGGCAGGGAACACGGTGGTTCTGGAGAGACTGATGCAGTCTCCG
GATGTGAATGTCAACATTGAGGACAATGAGAAACACACCCCTGTCCATTG
GGCAACAGTTTGTGGGCATCCAAAGTGCATTGAGCTGCTGGTTCAACACA
ATGCAACTGCGGAGACTGCTGACGTCCACGGAGCCTTCCCGCTGCACTAC
GCAGCTCAGATGTGTGGGACGGAGTACGAGGTACCCGGTATCGGCATGCA
CTGCCTCTCCAAGCTGGTACAGAGCAGGGCGGATGTTAACTGTGTGGACG
GCAGCAGAAGAACACCTTTGCTATGGGCTGCAAGTGCAGGCAGTGCCGAA
GCCTGTCTGACGTTGTTCAAGGCTAGGGCTGACCCCAAGTCTTCTGACAA
GGACGGTCTGACGGCGCTCCACTGTGCAGCCAGCCGGGGCCATCTCCAGT
GCTGTGATGTGCTGATCTCCCGGTGTGGCTGTCCAGTGGACAGTCTGGAC
AAGAACCAGTGCACGCCGCTGTTCTACGCAATATCGTTTGGGCATGGAAA
ATGTACATCTCTTCTCCTAGATAAGGGCGCATCACCAAACCACCAGGACA
CCAAGGGGAGGAGGTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg00607.0Blg00607.0-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg00607.0-exon-xfSc0001241-1570713199:1..504Blg00607.0-exon-xfSc0001241-1570713199:1..504Branchiostoma lanceolatumexon
Blg00607.0-exon-xfSc0001241-1570713199:736..997Blg00607.0-exon-xfSc0001241-1570713199:736..997Branchiostoma lanceolatumexon
Blg00607.0-exon-xfSc0001241-1570713199:1122..1352Blg00607.0-exon-xfSc0001241-1570713199:1122..1352Branchiostoma lanceolatumexon
Blg00607.0-exon-xfSc0001241-1570713199:1874..3180Blg00607.0-exon-xfSc0001241-1570713199:1874..3180Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
xfSc0001241genomexfSc0001241:1..3180 +
Properties
Property NameValue
GeneIDBlg00607