Blg00603.0 (mRNA) - B. lanceolatum

Overview
NameBlg00603.0
Unique NameBlg00603.0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0001104:7297..11088+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg00603.0 ID=Blg00603.0|Name=Blg00603.0|organism=Branchiostoma lanceolatum|type=mRNA|length=3792bp|location=Sequence derived from alignment at Sc0001104:7297..11088+ (Branchiostoma lanceolatum)
ATGGTAACTCCCGCCAAATCTGTGACTGGCCATCCACTGGATGTGCTTGG TGTTTTAGAGGTTCACCTCCGCCTGGGCAACTATGAAACCACCCATCCAG TGCACGTTGTCCGGGGAAGTGACCAGCCAGCCATTCTCGGCTGGGACTTC TGCACTGAGAACCACGTTGTCCTCGATACCGGACAGGGAATACTTACCAT AGGGGATACAACGGTGCCCTTGCTAACGACAACTGAACTCGTCCCACGAC TCTGTCATGCATCTGTCTGCCGAATCACCACTATTCCGCCTCGCGCAGTC ATGGCTGTTCCATTGTCCCTAACACCTCGGAACTCCACTGGCACCACGCC CCACAACTTCGTCGGCTTGCTCGAGCCACGTAGCTACGAGGACAGGGGTT TGGCCGTAGCACGGACAGTCGCGGCAGCCGACCATGCCAAGTCGTATGCC GAGGTCACCAACACCACTGACAAACCTATTACACTACACCCAGACACACC CATGGGCTCCTTCTGGGCCCTGGAGGATGATGACATCGCAGACTATTTAG GCCCATCCCCTCCCACACCGGCCCCAACACCTCCGCCCCTCAATCTCCAG CACTCAGATCTCTCCCCAATGCAGACAGAGCAACTGCAAAAGCTGGTAGA CACTTACTCTGATGTCTTCAGCACTTGCCCTAGGGATAGGGGCCGTACTA ACCTGACTTCTCACCGGATCCTCACCGGGGACAGCCCGCCTATCAAACAA CGACCTCACCGTACGCCCATCCACCGCCAAGCTGAAATCCATCGACAAGT GGAGGCCATGCTCGCAGACGATGTTATCGAGCCAAGCAGCAGCCCATGGG CCTCTCCGGTGGTGTTAGCCCGGAAAAAGGATGGCTCATTTCGTTTCTGC GTTGATTACCGCAAATTGAATCAGGCAACAATCAAAGATGCACATCCCCT ACCCAGGACTGATGATGTTATCGACGCATTGTCCGGTGCCGCATTCTTCA CCACACTGGACATGACCTCAGGTTACTGGCAAGTTGACCTTGACCCTGAT GACCGTGAAAAGTCAGCATTCACGACAGGACGCGGCCTCTTCCAGTTCAA GGTCATGGCCTTCGGACTTACGAATGCGCCATCGACCTTTCAACGCCTGA TGGAGCTTCTCCTCGCTGGGCTAGACTGGCGCTCCTGCTTAGCATACTTG GACGACATCATTGTGTTCTCACGGACCTTCCCAGAACACTTGGCCACCTT GGAAGAGATCTTCCAACGCTGTCGTACAGCCAACCTTAAGCTCAACTCCA AGAAATGCCAGTTCGCACGACCGCAAGTCCGTTTCCTCGGCCATGTTGTC TCTAAACGAGGAATCCAACCCGACCCGGCCAACACGGAGAAAGTCAAGAA CTGGCCAACCCCAACATCTACAGCTGAGATCAGGGCTTTTCTGGGCCTGG CATCTTACTACAGGAAATTCATCCAGAATTTTGCCCACATCGCAGACCCC TTGGTTGCATTGACGAGGAAGAACGCTACATTCTGCTGGACCAATGCCTG TCAAGCAGCATTTGACTCCTTGCGAGAAGCCCTCGTTACCCCGCCAGTGT TAGCATACCCGGACTTCCATCGCCCTCTCACATTATACACAGATGCCTCA AACGCGGCTGTGGGGGCTGTCTTGACTCATCCAGATCCAGCAGGGGAACG AGTGATCTCCTACGCCAGCAAAACTCTCACCAAACAGGAGCGTAACTGGT CTACATATGACAGAGAGCTATGGGCCATCGTCTGGAGTGTTCGCCATTAC AGCTCCTACTTGGCTGGACATACGTTTACTGTTGTCACCGATCACAAGCC ACTCGTCGGTGGCCTGAGCCCTAAGCTTATTGCCAACGACCCCACTGGCC GACGTACAAGATGGGCCGTTGAGCTTTCCACCTATCAGTTTAGCATCGTC TACCGGCCCGGAAAGTCTCACTGCAATGCGGATGCCATGTCTCGCCGCCC TCCAATAGAGAGAGACACCAGCTCTCAGGCGACCATTCCCCTTGCCGACA AGGACCCTGACCAAACGGATCCAAAGGTACTAGCACGGCAACGCATGGAG CCAGAGCAGCATCCCAGCCTGCCTGCAAGTGAGCCACCCACATCGCTTGC GGCCGCAGCAGGAAACATTTCCACAACTAAGGCACCGACAACCACAATCG CAGCCGTTGACCAGCAACCAGCAACATCAACCAACTCGTCAGATGACACT TCAGTGTGCCTGTCCCTGTCGTCCGATAATCTGCGTCAAGCACAAGAAGC AGACCCTGACATAGCGGAAGTCCTTCAGTGGAAACGCGGTCGACGGGGCC GACCTTCTTTCAATGCCATTCAGCACAGAGGACGTTACCTAAAGTCCCTG TGGCACCAGTATCCTAACTTGACTGTCAAGGGCGGTATACTATACCGCCG ATGGAGGCCCGCGTCTCGCCTACTACACCAGCGGATTGCACCCAAGGCCT TAGTGCCTGCCATCCTAAGAGAGCTACACAACAGACCTCTCTCTGGCCAC CTGGGACCAGCCAAGACCCTTCAACGGGTATACATTCGCTTCTATTGGCC CGGGATGACTCAGGAAGTAAAAAAGTGGTGTAGGGCGTGCGTTCAATGCG CTACAAGGACAACACCAACGCCAGCAGCACGGGCACCCCTAAAACCAATT CAGGCCCTTCGCCCCTTTGAGAAGGTAGCAATGGACCTCACGGAGCTGCC CACCTCTAAAAGTGGCAACCGTTATTGCCTTGTCCTGCAAGACTTCTACA CGAAATTCGTTAATGCATACCCTCTCATGCGCCAGGATGCCTCAACAGTG GCCCACACCATTTTCAAAGAATACATCCGTGAGCATGGCGTTCCGAGGAG TCTCCATTCGGACCAGGGACGCCAATTCGAAGCAGCCACCATGCGAGCGC TATACGACGCTCTTGGCATAGACAAGAGCCGGACTACCCCTTACCATCCA CAAGGAGACGGTCTTGTGGAACGGTTTAACAGAACATTGAAAGACATGTT GTCCAAATACGTCTCTACCACCGGTGATGACTGGGATGACCACCTCCCGC ACGTCTTACTCGCTTACAACACTGCGGTGCATGCCTCAACAGGTTACACA CCCTTTTTCCTTACCCACGGGAGGGAAGCAAACCTGCCAGCAGACGTGAT ACTCGGTCCGACCCCACAAGCATCGCCAACTACCCCCTCAACAATGTCCT ATGCTCGGAAGTTAACGACCAGTCTCCGGACGGCCTTTAAGGAGGTGCGA CAGAACACTCGATTGGCGGGCCAGAAACAAAAGTTGGCATATGACGCCAA GGTGTCGCACAGAGCCTATCAGGAGGGAGACAGGGTCTGGCTTCATGACC CCACCACCGTGCGACAAAAACTAAAACCCAGGTGGAAGGGCCCATACACG GTTGTAAAACGACTCGAGCCAGGGGTTACATACAAGTTACGAGACGACAA CGGTAAACACCAAGTAGTACACTTCAATAGACTAAAGAAATGTCATTCCA ACACAAGTGTTGCACCACCGGGTCGGCGCGCCCACCCCCCCGAACTACAG TCCCAGGGCGCCACTCCGACGCAGGCACCAGCGACCACGCGGCCCGAACT GCAGTCCCAGGGGGCCACTTCGACGCAGACAGCAGTGACCACGCGGCCCG AACTCCAGTCCCAGGGGGCCACTTCGACGCTGACATCAGTAACCACTCGG AGAGGTCGTCAAATACGACTGCCTTCCCGGTACTTGGACTGA

Coding sequence (CDS) from alignment at Sc0001104:7297..11088+

>Blg00603.0 ID=Blg00603.0|Name=Blg00603.0|organism=Branchiostoma lanceolatum|type=CDS|length=3792bp|location=Sequence derived from alignment at Sc0001104:7297..11088+ (Branchiostoma lanceolatum)
ATGGTAACTCCCGCCAAATCTGTGACTGGCCATCCACTGGATGTGCTTGG
TGTTTTAGAGGTTCACCTCCGCCTGGGCAACTATGAAACCACCCATCCAG
TGCACGTTGTCCGGGGAAGTGACCAGCCAGCCATTCTCGGCTGGGACTTC
TGCACTGAGAACCACGTTGTCCTCGATACCGGACAGGGAATACTTACCAT
AGGGGATACAACGGTGCCCTTGCTAACGACAACTGAACTCGTCCCACGAC
TCTGTCATGCATCTGTCTGCCGAATCACCACTATTCCGCCTCGCGCAGTC
ATGGCTGTTCCATTGTCCCTAACACCTCGGAACTCCACTGGCACCACGCC
CCACAACTTCGTCGGCTTGCTCGAGCCACGTAGCTACGAGGACAGGGGTT
TGGCCGTAGCACGGACAGTCGCGGCAGCCGACCATGCCAAGTCGTATGCC
GAGGTCACCAACACCACTGACAAACCTATTACACTACACCCAGACACACC
CATGGGCTCCTTCTGGGCCCTGGAGGATGATGACATCGCAGACTATTTAG
GCCCATCCCCTCCCACACCGGCCCCAACACCTCCGCCCCTCAATCTCCAG
CACTCAGATCTCTCCCCAATGCAGACAGAGCAACTGCAAAAGCTGGTAGA
CACTTACTCTGATGTCTTCAGCACTTGCCCTAGGGATAGGGGCCGTACTA
ACCTGACTTCTCACCGGATCCTCACCGGGGACAGCCCGCCTATCAAACAA
CGACCTCACCGTACGCCCATCCACCGCCAAGCTGAAATCCATCGACAAGT
GGAGGCCATGCTCGCAGACGATGTTATCGAGCCAAGCAGCAGCCCATGGG
CCTCTCCGGTGGTGTTAGCCCGGAAAAAGGATGGCTCATTTCGTTTCTGC
GTTGATTACCGCAAATTGAATCAGGCAACAATCAAAGATGCACATCCCCT
ACCCAGGACTGATGATGTTATCGACGCATTGTCCGGTGCCGCATTCTTCA
CCACACTGGACATGACCTCAGGTTACTGGCAAGTTGACCTTGACCCTGAT
GACCGTGAAAAGTCAGCATTCACGACAGGACGCGGCCTCTTCCAGTTCAA
GGTCATGGCCTTCGGACTTACGAATGCGCCATCGACCTTTCAACGCCTGA
TGGAGCTTCTCCTCGCTGGGCTAGACTGGCGCTCCTGCTTAGCATACTTG
GACGACATCATTGTGTTCTCACGGACCTTCCCAGAACACTTGGCCACCTT
GGAAGAGATCTTCCAACGCTGTCGTACAGCCAACCTTAAGCTCAACTCCA
AGAAATGCCAGTTCGCACGACCGCAAGTCCGTTTCCTCGGCCATGTTGTC
TCTAAACGAGGAATCCAACCCGACCCGGCCAACACGGAGAAAGTCAAGAA
CTGGCCAACCCCAACATCTACAGCTGAGATCAGGGCTTTTCTGGGCCTGG
CATCTTACTACAGGAAATTCATCCAGAATTTTGCCCACATCGCAGACCCC
TTGGTTGCATTGACGAGGAAGAACGCTACATTCTGCTGGACCAATGCCTG
TCAAGCAGCATTTGACTCCTTGCGAGAAGCCCTCGTTACCCCGCCAGTGT
TAGCATACCCGGACTTCCATCGCCCTCTCACATTATACACAGATGCCTCA
AACGCGGCTGTGGGGGCTGTCTTGACTCATCCAGATCCAGCAGGGGAACG
AGTGATCTCCTACGCCAGCAAAACTCTCACCAAACAGGAGCGTAACTGGT
CTACATATGACAGAGAGCTATGGGCCATCGTCTGGAGTGTTCGCCATTAC
AGCTCCTACTTGGCTGGACATACGTTTACTGTTGTCACCGATCACAAGCC
ACTCGTCGGTGGCCTGAGCCCTAAGCTTATTGCCAACGACCCCACTGGCC
GACGTACAAGATGGGCCGTTGAGCTTTCCACCTATCAGTTTAGCATCGTC
TACCGGCCCGGAAAGTCTCACTGCAATGCGGATGCCATGTCTCGCCGCCC
TCCAATAGAGAGAGACACCAGCTCTCAGGCGACCATTCCCCTTGCCGACA
AGGACCCTGACCAAACGGATCCAAAGGTACTAGCACGGCAACGCATGGAG
CCAGAGCAGCATCCCAGCCTGCCTGCAAGTGAGCCACCCACATCGCTTGC
GGCCGCAGCAGGAAACATTTCCACAACTAAGGCACCGACAACCACAATCG
CAGCCGTTGACCAGCAACCAGCAACATCAACCAACTCGTCAGATGACACT
TCAGTGTGCCTGTCCCTGTCGTCCGATAATCTGCGTCAAGCACAAGAAGC
AGACCCTGACATAGCGGAAGTCCTTCAGTGGAAACGCGGTCGACGGGGCC
GACCTTCTTTCAATGCCATTCAGCACAGAGGACGTTACCTAAAGTCCCTG
TGGCACCAGTATCCTAACTTGACTGTCAAGGGCGGTATACTATACCGCCG
ATGGAGGCCCGCGTCTCGCCTACTACACCAGCGGATTGCACCCAAGGCCT
TAGTGCCTGCCATCCTAAGAGAGCTACACAACAGACCTCTCTCTGGCCAC
CTGGGACCAGCCAAGACCCTTCAACGGGTATACATTCGCTTCTATTGGCC
CGGGATGACTCAGGAAGTAAAAAAGTGGTGTAGGGCGTGCGTTCAATGCG
CTACAAGGACAACACCAACGCCAGCAGCACGGGCACCCCTAAAACCAATT
CAGGCCCTTCGCCCCTTTGAGAAGGTAGCAATGGACCTCACGGAGCTGCC
CACCTCTAAAAGTGGCAACCGTTATTGCCTTGTCCTGCAAGACTTCTACA
CGAAATTCGTTAATGCATACCCTCTCATGCGCCAGGATGCCTCAACAGTG
GCCCACACCATTTTCAAAGAATACATCCGTGAGCATGGCGTTCCGAGGAG
TCTCCATTCGGACCAGGGACGCCAATTCGAAGCAGCCACCATGCGAGCGC
TATACGACGCTCTTGGCATAGACAAGAGCCGGACTACCCCTTACCATCCA
CAAGGAGACGGTCTTGTGGAACGGTTTAACAGAACATTGAAAGACATGTT
GTCCAAATACGTCTCTACCACCGGTGATGACTGGGATGACCACCTCCCGC
ACGTCTTACTCGCTTACAACACTGCGGTGCATGCCTCAACAGGTTACACA
CCCTTTTTCCTTACCCACGGGAGGGAAGCAAACCTGCCAGCAGACGTGAT
ACTCGGTCCGACCCCACAAGCATCGCCAACTACCCCCTCAACAATGTCCT
ATGCTCGGAAGTTAACGACCAGTCTCCGGACGGCCTTTAAGGAGGTGCGA
CAGAACACTCGATTGGCGGGCCAGAAACAAAAGTTGGCATATGACGCCAA
GGTGTCGCACAGAGCCTATCAGGAGGGAGACAGGGTCTGGCTTCATGACC
CCACCACCGTGCGACAAAAACTAAAACCCAGGTGGAAGGGCCCATACACG
GTTGTAAAACGACTCGAGCCAGGGGTTACATACAAGTTACGAGACGACAA
CGGTAAACACCAAGTAGTACACTTCAATAGACTAAAGAAATGTCATTCCA
ACACAAGTGTTGCACCACCGGGTCGGCGCGCCCACCCCCCCGAACTACAG
TCCCAGGGCGCCACTCCGACGCAGGCACCAGCGACCACGCGGCCCGAACT
GCAGTCCCAGGGGGCCACTTCGACGCAGACAGCAGTGACCACGCGGCCCG
AACTCCAGTCCCAGGGGGCCACTTCGACGCTGACATCAGTAACCACTCGG
AGAGGTCGTCAAATACGACTGCCTTCCCGGTACTTGGACTGA
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg00603.0-exon-Sc0001104-1570713199:7297..11088Blg00603.0-exon-Sc0001104-1570713199:7297..11088Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg00603.0Blg00603.0-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0001104genomeSc0001104:7297..11088 +
Properties
Property NameValue
GeneIDBlg00603