Blg00576.10 (mRNA) - B. lanceolatum

Overview
NameBlg00576.10
Unique NameBlg00576.10
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000273:142462..145477-

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg00576.10 ID=Blg00576.10|Name=Blg00576.10|organism=Branchiostoma lanceolatum|type=mRNA|length=3016bp|location=Sequence derived from alignment at Sc0000273:142462..145477- (Branchiostoma lanceolatum)
CACAGTTTTGTGTTCCCTTCCAAGAAGGATGCATGTATGTACGAGTTCCT TAGCTTTCTTTACTTATTTTACCTGACAATCGAAGTTGTCACTTTTACCA CTGTCTGAATGGCTGATGTTCTACCTTGTACATGACTCCATATTTGATTG AACCATTTTTGTATATATTGATTTTCATAGATCCACATGGAAAGCCCTGA CCCGATGTTGTGTTTTAAGTACTGGAACACCACACTAGTCCAACAGCCCT TCAGACACGATAACCTGACGGCCTCCTTCCTGCAAGACTCCATAGCCTTC ATACACAACAACAAGGACAGACCCTTCTTCTTGTACTTCTCCTTTGCTCA CATGCACACCGACATGTTCTCTGCACCGAGGTTCAGGGAGACGTCGAGAA GAGGTAACGTTAACTATTTTGTCCACTCTCTTTGTTTCTTTGCTTATCCG TTTGTTTCTTTGTTTGTTTGTTTCATCGGTGTTTGTTTCTTTGTTTGTTT CATTCTTTCTTTGTTTGAAAGGTAGTAGAAAGATCTAGTAATACTTTCTT TTGATCAGCATTGTGACTTAGGGTCCCTGGCTGTTGTTGTCGTCCATTTA AATGATACAACAAATATGGGTCTGTACCGTTAGGCCGATATGGAGATGGA GTACGTGAGTTGGACTGGGCTGTAGGAGAGGTGCTGAAAACACTCGTCAG TCTACAGATCCAGCACAGAACACTGATGATCTTCCTGTCGGATCACGGAG GCCATCTGGAGATCTGCACAGAGGGCGGATCAAATGGGATTCTCAAAGGT ACACTTTCCTGTGAAGATAACATCAGTCTGTACATCAGATATAGGATAGA CGTGTCTTGGCTGAGAACCTTTGAAAATACTACATTTCATTTCGTAATCG CAATTTCCGTTGTGCATTTTGTAGGTGGCAAGGCATCTACGTGGGACGGA GGGCTGCGTGTTCCTGGTATAGCCTGGTGGCCAGGTGTTGTTGGACCTGG GCAGGTGTCGCAGCACCTGGTCAGCTCCATGGACGTGTTCCAGACAGCTG CTGAGCTGGCAGGTGCAACACCACCAAAGGATCGCATCTATGACGGGAAA AGCCTGGTTCCGATTTTGCTGCAGAAGACGTCGGCTGTTCCAAGAAGTAA ACTTTCTCCTTCCCCGCGGACATTGTTTCACTACTGCTCCAATAGACTAA TGGCTGTTAGGCACGGGGGGTACAAAGCACATTTCCACTCCATGGAGCTA CCCGGACTGAACTACACGGAATTTTGCCCGAGTGGTGTCCCAATAGCGGA CTACTACACATCGTTTGACTGTTACGGCCCTCAAACCACACACCATGATC CACCACTACTCTTCAATATAGACATGGACCCAGGAGAACGGTATCCTTTG CCCATAAATGAGTACAAAGATATTCTGATAGAGATTCTTTTGGAAAAGTT AAAACACGAGGTCAGAATGGTACCAGGAAAGTCGCAGTTAGAAGAAGGTT CTGGGGCGGTACAGCCTTGCTGCAAGCCGCCATTTTGTACATGTAATTAC GAACCGTTTTGGGAAAAGGGATAAAATAAAACAGAACAATACGCAGGGCA ATATGTCTTCTACAATTTTACTGCTTCAGCTGAGGAAATTAGATAGGAAA CAAAGGATCGGATACATCGATCAGGTGGATTAAGCGCACAAGGAACTCTC GGATGTACAGTCCTCAAGACTGTGTACCTCAAGGTTGCATCCTCGACAAC CTCCTATTTCCTTTAAACTTGCAAACTTTGAGCAGTATTATAGAGCGGTA CTCGTAGCACGTAACGCCACAATTGTCCATACTGCAGTCATAATAGAGTA AGACTCTCGTACACTCACAAACTCAACGACACTAAGTGTTCGCACAATAG TGACTTGTAGTGTTTGGTATTCTGTGTGGTGATTAGGTACCACTAATGCA ATAATTCATACAAGTGATATTGGCAGTTGAGAGAATAACAATTTTAAACA ACTTTTGGCGCTCATGGTTCTCAATCATACAACAAACGTTCGTACAGTAC AATTCACTACAAACGTGCAGTGAACGATGCAGGTGAAAAATTGTTACAGG ATAGATCGTTCTTACATTTTGATTTAAAAAGAATACTTGAATATAATAGG GAAAGGTTGTTATACAATGCGTCATTTTTCAAAGCTATACACAAAGTTCT TTGATTTCCGCTCGGAGACATTGAAGTTTGCTCGAATTGGCATTATCAGT ACTACCGATAGGGGGCGTGCAAAACAGATCGCATATTTGTCATAAACGTA CTTCAATGGAACAAGATCGAGTTTGTACATTGCCATTTCGGGCCGGCTAG GTCTAATTTAAACAGTCATCTGTTAAGAGGCTAAACTTTACATAACAAAT ACTGAAATAATTGGTACTTACTCAAGTTTTCTCGTTCACGAAATGTACTG ACAAACACGGTATTAAGACTTGTTTCAGACCGACACCGACCCGAAAAATT CTTGTACCTCCTAAAGACAAAAAGCCAAAGGAAAGTAGATATGGTGTGGT GTATCACAACTCCTGCCAAAACCGAACGTGCGTTGAAAACGAGGTTTCTC GAAAAGCAACGACCGAGTTCTGCCTGCAATACCAACATAGATTACTAGTC GACGCTTCAGTACCGCAGAGTGGCAAAGTACAATCATAATTTCCTGACAT AAGTAATACTCGATAACAACACGTTCGCTCCTGCAAATTATGTTACATAC ATACATACATACGTACGATTTTCCCAAAGATGAATTACACTTACACGTAT TTGTTCGTAATTGCTAGCAACCATTTATTTCTGGCGACCCCCTCTCTCTA TTTTAATATGGTCTATACACCCAGGTCATTGCAAATGGCATCGTATGCAA CGCAATGAATAATGGCAAATAAAAGATATTTTGATTACATGATCGTCAAT GTGAATCATCAAGCTTGATAATTCACTACCAAGGTAATTGATAGAACCGT TCATTATGGACTAGCT

Coding sequence (CDS) from alignment at Sc0000273:142462..145477-

>Blg00576.10 ID=Blg00576.10|Name=Blg00576.10|organism=Branchiostoma lanceolatum|type=CDS|length=1044bp|location=Sequence derived from alignment at Sc0000273:142462..145477- (Branchiostoma lanceolatum)
ATGCATATCCACATGGAAAGCCCTGACCCGATGTTGTGTTTTAAGTACTG
GAACACCACACTAGTCCAACAGCCCTTCAGACACGATAACCTGACGGCCT
CCTTCCTGCAAGACTCCATAGCCTTCATACACAACAACAAGGACAGACCC
TTCTTCTTGTACTTCTCCTTTGCTCACATGCACACCGACATGTTCTCTGC
ACCGAGGTTCAGGGAGACGTCGAGAAGAGGCCGATATGGAGATGGAGTAC
GTGAGTTGGACTGGGCTGTAGGAGAGGTGCTGAAAACACTCGTCAGTCTA
CAGATCCAGCACAGAACACTGATGATCTTCCTGTCGGATCACGGAGGCCA
TCTGGAGATCTGCACAGAGGGCGGATCAAATGGGATTCTCAAAGGTGGCA
AGGCATCTACGTGGGACGGAGGGCTGCGTGTTCCTGGTATAGCCTGGTGG
CCAGGTGTTGTTGGACCTGGGCAGGTGTCGCAGCACCTGGTCAGCTCCAT
GGACGTGTTCCAGACAGCTGCTGAGCTGGCAGGTGCAACACCACCAAAGG
ATCGCATCTATGACGGGAAAAGCCTGGTTCCGATTTTGCTGCAGAAGACG
TCGGCTGTTCCAAGAAGTAAACTTTCTCCTTCCCCGCGGACATTGTTTCA
CTACTGCTCCAATAGACTAATGGCTGTTAGGCACGGGGGGTACAAAGCAC
ATTTCCACTCCATGGAGCTACCCGGACTGAACTACACGGAATTTTGCCCG
AGTGGTGTCCCAATAGCGGACTACTACACATCGTTTGACTGTTACGGCCC
TCAAACCACACACCATGATCCACCACTACTCTTCAATATAGACATGGACC
CAGGAGAACGGTATCCTTTGCCCATAAATGAGTACAAAGATATTCTGATA
GAGATTCTTTTGGAAAAGTTAAAACACGAGGTCAGAATGGTACCAGGAAA
GTCGCAGTTAGAAGAAGGTTCTGGGGCGGTACAGCCTTGCTGCAAGCCGC
CATTTTGTACATGTAATTACGAACCGTTTTGGGAAAAGGGATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg00576.10Blg00576.10-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg00576.10-exon-Sc0000273-1570713199:145444..145477Blg00576.10-exon-Sc0000273-1570713199:145444..145477Branchiostoma lanceolatumexon
Blg00576.10-exon-Sc0000273-1570713199:145075..145297Blg00576.10-exon-Sc0000273-1570713199:145075..145297Branchiostoma lanceolatumexon
Blg00576.10-exon-Sc0000273-1570713199:144680..144844Blg00576.10-exon-Sc0000273-1570713199:144680..144844Branchiostoma lanceolatumexon
Blg00576.10-exon-Sc0000273-1570713199:142462..144553Blg00576.10-exon-Sc0000273-1570713199:142462..144553Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000273genomeSc0000273:142462..145477 -
Properties
Property NameValue
GeneIDBlg00576