Blg00569.1 (mRNA) - B. lanceolatum

Overview
NameBlg00569.1
Unique NameBlg00569.1
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Full-screen view
Sequence
The following sequences are available for this feature:

mRNA from alignment at xfSc0003124:1..1791-

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg00569.1 ID=Blg00569.1|Name=Blg00569.1|organism=Branchiostoma lanceolatum|type=mRNA|length=1791bp|location=Sequence derived from alignment at xfSc0003124:1..1791- (Branchiostoma lanceolatum)
AGGTGATACAAGTATGCTGCAATGTGCGTGAAGGCCGCAAGAAGTGTCTA
GCTTGCACCCGGAAGTAACAACCGTGCTTCGGGGTCACCGGTATAGCGCG
GTACAGCTTTAATACCGAAGTTCGGCCACCGAAACCTTGATTGCCTATAG
CCCACGGTGGTACTAGTTAATAGTAAGTATGTAAGTGAGTCTACAAACGC
TATCATGTTCCTGGATATCTAACCTTTATTAACGACGTTGCGTATTTTAG
CCTATAGGTGTGTGTGGTTTTCCTTTCTCTTAGCCGCCAGTACCGTCACA
TAGAGCGGTCCGACTTTGCTGTCCGCTGGTTTCATTCCGACCTAAGAAAA
ACTAGAGAGATTTAAGTGTCATTTAAGACACTCCAGACCAGCCTTTTCTC
AGGTAACAATCTTACGTGGTGTTGATCTTTTCTATCCTGCAGTTGATCAG
GTGTACAGAAGTCGAATCTTTATTATACAACAAACCGGACCCGGAAGTAT
GTGAAACATGGCTGCCCAAGGTGAGACTTTTGTCGTCAGTGGAGGTGGAC
TAAAATAAACAAATCCCGTTGCACGTTGTAACTCTTTATGTATCCATTCA
CTTGATATTAACATGGTCTTGCCTTTCTTGAGATCGCTCACATCTTATTC
TTATCTGAATGTATAACAAAGAATCAAATCTACTTGGGTAATGTTTCATT
CTAAAGTCTATTAGAAAAGTACGACCTTGGATAAGTACACATAACTTCTG
GTAGCGAGGTGTTGCCCTCTAGCGGAATTTTATCGCTATCCAGCAAATGC
AAATATATGCAAAGCTAGGCACAGATATCTAATATGATGCTTTCTGTTGT
AAAGGAGGACAATAACAACCCTTGGGTGACTAGGAATGATCTTGGAATGG
ACTCTAGTAGATACTATATCATCATTAATCATTGCACATATCATATGTGA
CAGCATTTAAAACTACTAACATTTCTCATTCCAGACGTTCCGCGGCGGTA
CTTTTTCTACATCAAACAAGAAGTGGCCTCTCGTTGGAAGGACCTGGCCG
AATGCTTGGGCGTTGAAAACTCGTCAATCAGAAACATTGACGGCAGAAAC
CGAGATGACAGGTCCCGCTGTATGGACCTGTTACAGGAGTGGAAAATGAC
GAGGGGTGAAGCCGCTACCACAGAGGCCCTAATGCAGGCTCTATCCGACG
CCGGTCTACGTGAAGTTCTGGTTAAATTGAAGAATAGATTTCCTGGTGAA
TTTTGTTCTGTCATTTCAATACTACATTTCCTATGCATTGGAAAAATATA
TGACCAACTCCCTTTTTTTACCTCCATGAAAAAATGGAGGGATTATTTTT
GGTCTGTAGGTGTGTGCTTTTGTTTGTGTGTTGTTTGCTTGCGTGTTTGT
AATTGTGTTTCCGGATATTTGCCTTATCATTATAAATTCAAAATTGCCAT
GATCTATCTAATACAAGTTCTAAATTATACGAATCTTGTCCTTGTGGCAT
GTATAATTTAGTTTAAGGTGTACCGTGTACATATCAAGGCATACATTATA
CAAATGTGGTAGTTATTTTCATAATCAAACTATTTCATGTAAGTATGAGA
TCTCCGAACTCTTGTTTGTTTTCGTAATACGATTGTGTATAAATTAAGAA
TGTGTTCTTTTCACGTTGATGAAGGTTAGACATCCAGGTAATAAGATACG
CATGTGTTCTTTACACTCAACAGAGTTAGCTACAGTCATAGAGCAGATGC
TTTCAGTGATGCAACCCTGCCAGGAGCCGATAGAACAACCT

Coding sequence (CDS) from alignment at xfSc0003124:1..1791-

>Blg00569.1 ID=Blg00569.1|Name=Blg00569.1|organism=Branchiostoma lanceolatum|type=CDS|length=342bp|location=Sequence derived from alignment at xfSc0003124:1..1791- (Branchiostoma lanceolatum)
ATGGCTGCCCAAGACGTTCCGCGGCGGTACTTTTTCTACATCAAACAAGA
AGTGGCCTCTCGTTGGAAGGACCTGGCCGAATGCTTGGGCGTTGAAAACT
CGTCAATCAGAAACATTGACGGCAGAAACCGAGATGACAGGTCCCGCTGT
ATGGACCTGTTACAGGAGTGGAAAATGACGAGGGGTGAAGCCGCTACCAC
AGAGGCCCTAATGCAGGCTCTATCCGACGCCGGTCTACGTGAAGTTCTGG
TTAAATTGAAGAATAGATTTCCTGAGTTAGCTACAGTCATAGAGCAGATG
CTTTCAGTGATGCAACCCTGCCAGGAGCCGATAGAACAACCT
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg00569.1Blg00569.1-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg00569.1-exon-xfSc0003124-1570713199:1620..1791Blg00569.1-exon-xfSc0003124-1570713199:1620..1791Branchiostoma lanceolatumexon
Blg00569.1-exon-xfSc0003124-1570713199:1272..1349Blg00569.1-exon-xfSc0003124-1570713199:1272..1349Branchiostoma lanceolatumexon
Blg00569.1-exon-xfSc0003124-1570713199:547..807Blg00569.1-exon-xfSc0003124-1570713199:547..807Branchiostoma lanceolatumexon
Blg00569.1-exon-xfSc0003124-1570713199:1..68Blg00569.1-exon-xfSc0003124-1570713199:1..68Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
xfSc0003124genomexfSc0003124:1..1791 -
Properties
Property NameValue
GeneIDBlg00569