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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000683:13619..19842+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg00566.2 ID=Blg00566.2|Name=Blg00566.2|organism=Branchiostoma lanceolatum|type=mRNA|length=6224bp|location=Sequence derived from alignment at Sc0000683:13619..19842+ (Branchiostoma lanceolatum)
CGTAACGTTGTGAGCTGCCCAAATCCCTGATCTCTGGTCGATTCATAAGG
AATAAAAGCGTTTAGTTTTTGATAGATTGTCCGGAAGATGCTATATTCAT
TTTATTTGAAATTTTTTAACCAAAAAAAAGCTGCATGAAATGAGTATTAT
TACGCATGCGTAATTAGCTTGTTTGGCTGACCCGCTGGCTGCGAAGTTTA
GTTCAGTTCGAGACATATACCGAGAACAAAACCATGGGAAGACCAGGTAC
ATTTTCCATTTTATGAAGTCTTGGGAGTGTTGTTAACGCATATTGATTTC
TATGCTTGGTCGCGGAGTAAGATGCTTTGATTGGGGAGGGATAAAGCATG
CGATAGTAGGGTATATGACCACAGCATGGTGGGAGGGGGGCGCCTCAAAC
ACGTGCGCGTACCACGCCGCAGAGAAAGCCAAACACCACTGGTGGCGAAA
AACTTTCATCAAAACCTATACTGAAGAATTATCAATCCAATTACGAATAG
CTATTCTGACATTTCTGATTAGTTCTAATTAGTCCCATCTGGTACTTCTT
TATTACTTCATCTTTACAAGACCTAGCTAAACAGGATAAAGTTTTTCATG
TCAAAATTAGAACTTTAAAATCTTGTCCCACCAAGGAGGTAATTTTCTAT
TCTTTGGTCCCACATATTAAAACGGCTTTTTCGATTTCACCGTGAGTTTG
ATTTAGATGCACGGCACACAGAACCCTCTGATTGACCTCCAGTTTGAACT
TCAGTCCATTTCTTCCACTAGTTCCAGATTCCTAAATTATGATAAGAAAT
TAGTGCTGCACCGTCAGCAATCTTTAGTTTATATCAAAGAAATTATAGCA
CAGTGATACTACTACTAGTATTAGGGCAGTAACTTGGGTAAGTCCTCTTG
TTGACATCTACTGTTGTTTTTCGCTCATAGGTTTCTCACCGCGTGGAGGT
GGCAGAGGTGAGAGTGCATTTTATTTTATTCATAGAAATAGATCATCATC
GCCATCAGATTGAGAATATCACTCCAGTCCAGAGCTGAGCTTGATTTGAA
TTTTGCAGACAATTTCGTAAACGTATACTATACGTTTACGAAATTGTCTG
CAAAATTCAAATAGGATTTATTAAGGATGACATAACAAATCTGTTCTGGT
GTGCTGTTAAACAGCTTTGGAAGAAGTTCCTTGTGTCTTGCAGCTATACT
ATTCTCCTTGAATAGTCTATTAGTTTGTAGCCATTGTTTTATCTTCTGCT
ATTCTTCTCCATTAGGTTTCTCACCACGTGGGGGCGGCAGAGGTATGTGT
TTAGCAATTCCAATATTTGCAATATTTTAAGATCTAATAGCAATACACCA
TGAGTCGGACTCAACAGTGTAATTTTGAATTAAAGAAATACCAACACACA
CTTGCCACAAGTCTTCTTGCTCTTCACTTAATATTATCGTCATGGATATA
TTGTATAGTGTGTGAAAGCAAATTTCGCTTTCTCTGTCAGTGTTGAACCT
ACCCTTTTGTTTGATTCCAGGATTTTCACCACGTGGTGGTGGTGGTGGTT
TCAGAGGTCAGTTCAACTGCTTTATATGAAAAGACGCTGGTTTGTATGGA
ACTTAAGACAGCTTCATCTGTGAAGTTGATGGTTAATGTTTGTATTAGAA
TATCAATTTAAGCGTTGATGTACAATCTACTTCTGGCATGTGGTAATATT
ATATATTGTATTGGCTTTCATGTGTTTCATTGTATTTTCAGTTTATCGTA
TGGATTTTTAGAGCTAAAAATTCCTGAACGTACTTTTGTTTAAAAAAAAA
CATAACGGTACACAGGAACTTCAGGAATGAAAGAGTAGACTTTGTTCAGG
CAAGCAGCCCGAAATTATGATTATGATGTTCATCTATCTAGATCAATTCT
CACACTGCCTTTTTTGTGTTGTAGGTGGAAGAGGAGGATTCGGTGACCGT
GGAGGTAGAGGTAAATATCTAATGTACATGTAGGATAAGACGCAAACAAT
TTAGAAGCAAGTTACATACACAAATTGTCCTTGTTTTACCTGTATTTTCC
AAGTTATGTTATCTGTTCATGATATATTACATGTAGATAATGTAACCTGT
TTTGCAACCTATTAATGGTAGAAATGATGGTGCTTATTGAGTACTACTGA
CAGTCATAGTTGACTCCAATGTTTCCGACATTAGCAGACATATTTGTACA
TATAAGAAGATGTATATAAAATACACAGTCTTTCCTATCCAGAGAGTTTG
AGGAAGTCTGCCTAGTGTGTTTTAGTATTGATAGAAAACCTGCATAGGTG
GTTGATGACTTGAATGTGACCATTTTGTGGAATGTGTTTGCAGGTGGCTT
TAGAGGCCGTGGTCGTGGCGGAGGCCGTGGTGGCAGAGGTAAATATGTCT
GCATCCCTCAATGTTGTCTTTGAAGAACACCATTGAATCACTTCCAACTG
TAATCCCTGGCTTGCTCAGCCAGTGTCTGTTTGTGGAGTCTTGAATACCT
TCAAAAGGCTAGAGGAACAGAAATGATTCTCATATGAAGCTATCTATATG
AATCATACTAATGCACTGCGCGATAGCTTTCAGTCAAGATATCGCACCCT
TGGGATCAAACAAAGAAGAAGAAAAATACCTGCTTTTAATATCTACTTTG
ACTGCCTATATGTATATGCAAGTCTATGCATGACAGTGCATACTGCATAG
TTATTACAAATATGATATGTGTGGCATGGTGACTACAGTTCTGTTTGCCT
GATTATTTTAAAAGTCATTGGCTGATGCTAATACGCACAAAAAAAGTGTA
CCAAACTGTGAAGAAGAATTTTTTTAAGCCACCACTATATGAAAAATTAC
TTTGCTCTACCTTGTAGCTGTCTTTCAAAGGATTGGATGTGTGATTGCAC
ATCATATGGGTTAGTAGGAATCATACTCTTAGTCTTAGATATACAATTGA
CATTACTAAATTGATGCTGTTTGTCCAATGTAGTTATCTGTTTTCAGCTA
CAGTAGAGCCAATTTCTTGTATACCATACATTTAGTCAAATATGCAAATG
AAAAATGTTTGAGAGCTGAGCAATGCCGAGGAAGGTTTTGTAGCTGAACG
CTACACAGGAGGCTATCATTGTGGGTCATATTCTTGTCACCCACAAAAAA
GCCATTATACATCCCACTCCAATGCTACATTATGACTTGTTCTGAACCAG
TTACCACCACTTAATCAAACATGTCTGTATCTCTCCAGGTGGTGGCAGGG
GTGGCTTTGGTGCAGGAAGAAAGGTGGTTGTCGAACCTCACAGGCATGCA
GGTATGTACAATTCATGGTAAAGGATTGTCAGCATGGTAAAATATTGAAG
ATGTCAGTCTGTCTAACTTTTTTTTTCATTACACTAACTTCATGTTGGCA
TTGTTATTAACCAGTTGTGCTTTGCTGTGCTTTACAGGAGTGTTCATTTC
ACGAGGGAAGGAGGATGCCCTTGTCACCAAGAACATGGTGGTTGGAGAGT
CGGTGTATGGAGAGAAGAGGATAACAGTGGAGGTAGTGTATGGAATACTT
CATCAGATGACGAAGTGAAGAGCTCAGTTTCTAAGAGTGAAGCTATGCAG
ACAACTATTTGTTCTGAAGGAAGAGGGTGGCGAAAACTTTAACAAAATGT
AGGAATGCACCAAAAAATCTGGAAATCTGAGCCCAAAGAGATTAATATAT
TCAGATCTACTTTGGCTGTTGTTGAAACTCAGTACAAAAATGAAATTTTG
CCGTGCTTTATAAGCTATTTGTAGTCACATCTCCCTCATAGCTGTTTCTT
GATGTTGTTTCAGGAGGGGGAGAACAAGTTGGAGTACCGTGTGTGGAACC
CGTTCCGTTCAAAGTTGGCTGCAGCCATCCTAGGTGGGATTGACCAGATC
CACATGTTTCCTGGCACCAAGGTCCTGTACCTGGGGGCTGCCTCAGGCAC
CACTGTCTCACACGTGTCCGACCTGGTGGGGCCGGTAAGTAACAAAAACT
AGCCAGGTATCACTGATTATTTCTCCATTGGCAGCTTTTTAAATAGCCTG
GGTGCCATCCTAGTGAGTTTTCTGCGACTCCCATACACTCCCTCTTATCA
ACAGTTGGTAACCAGAGAGCATGGGGTTGCAGAAAACTTGTTAGGATGGC
ACCCAGGACACTATTCAGAGGCATACTTTTTGATGGGGGGGGGGGGGGCT
GGGGTTAGTTCAGAACTTCAGATGATACAAAGGAACACCCTAGACATGTG
ACCGATGCTGAAGTTCTCCATGTCTGTTACAGGAAGGGCTGGTGTATGCT
GTAGAGTTCTCCCACAGGTCAGGCCGAGATCTCCTCAACGTGGCCAAGAA
GAGAACCAACATCATTCCAATCATAGAAGATGCCAGACACCCTCACAAGT
ACAGGATGTTAGTCGGTAAGATTTGGCGAAAATCTTTATATGCATTCCAC
CTGCACATTCAGTATTGCACTGGTGCTTTGTGCATCTTTTAGTGATTACT
CTTGTGTATTGTTTGGTGGTATCTATACATGTTGTATGTATGTGTTTGTT
TGTTTGTTACCCTTTACAATGAGATACAAGTTGTTGATAAATGTCTGTGT
ATTTGGTGCACAGGTATGGTGGACACAATCTTTGCAGATGTTGCCCAGCC
AGACCAGACCAGGATAGTAGCAATCAACGCCCATAACTTCCTGAAGAATG
ATGGTCATTTTGTCATCTCTATCAAGGTGAGATTATCACATTGGAATACA
GATTAAGCCAGTGATGCACTTTGACTATGTGTAGTATGTACCCATTTAAA
GAAATGTACTGATATCTGTTATAAAGAACTATGAGCTAGATCTTGATTAA
TTATTGTGTTCATTAAGGCTATTGTAATTTTTGTTAAGGATAAGGATATT
GTATTGGATTAAGGATATTGTAAGTGCAGAAGAATATGGATTGGTTTGAA
ATACAACTGTTGTCTTTTAGTGTCATTGCAGCAAGGGCACATTTTGATGT
TCCTTAGCTCACATACACCGGAGTGGTGACATATTTTGTTTTCTAACTGT
CATGTATCGTTCTGTTTTCAGGCCAACTGTATTGACTCCACAGCATCAGC
AGAGGCTGTGTTTGCAGGTGAAGTTAAGAAGATGAAGTCAGAGAAGATGC
ACCCAAAAGAACAGCTGACATTGGAACCATACGAGAGGGACCATGCAGTT
GTGGTAGGAGTGTACAGGTCAGTGTCACTTGGTCTTAATAGACAGACGTA
GCACCAATAGTCTTCGTTTTCAAATACCCACAAGATACCAGATGGTGCAT
GGGGCGGCATCAGGGGGCAAGTCCACTGATAGTGGTGTGTGTTTAACTGT
CAGTGCTAAGCAGAGAAGGCAGCATGTGCCATTTTTAAAGCCTTTGGTAT
GATTCGGCCAGGCATTGAACTCACGACCTACCATGTGCAAGGCGAACACC
GACTAGGCCATTGCACCGGACTCAATATTTGAACTATGTTGTAATTTTGA
TGTCTTCTTTTTTTGCAGACCCTCGAAGAAGTGAGTCCAGGATTCAGACA
TATTTGTTATTGTCTTCTGTTTTTATGGATTTAGTTAAACACAGTATAGA
TCTACTGTTTCCCCAGTGTTACATGAGGACTCTGGTATCATTGATTGGAG
AAGTGGACAAGACTGGCTAAGATATAATTTCACTTGCCAGTCATCTTGTA
AATCAGGTCTCTTAGTTATGGTAAGGATATATCTTTTATGGAACCTGTAG
TACAGTCTGGGTATTATCTACAAGACTTACAGGCTTGTATTAGATAAGTT
TGGATTTCCTTGCTCAGAATTTTCCTTTTTTATTGCTACAATTTGTGCCA
ATAGAAGGTAGCTTATGGAATGTCTGCTAATCAAATATTGATTTTTTGTA
GTTTATAGACTTTAAACTGCCTTCCTGGTGGTTAAAGAAACAGACTCACA
TGATGAAAAGAAGGTTTTAGTTGTAGAGTTGATTTCTACTAAGTATGTGG
GTCAGGTAGAAGTGATCTACCTAAATGTTTGTATTTATGGCCAAATTGAT
ATGGAAGAATTTTTTTTGAACACTTAAGTTGTCCAGAGCTATACAGATAT
GTGCACAAAAAGATGTACTTCCACTTCCAGACTAACATATACCAGTACTA
CCATTTTCCAATGTAAGGTGATGAAAACCATGCTAATAAAAACATTTAAC
TGCGACAAAGAGTCAAAGTCTTGT Coding sequence (CDS) from alignment at Sc0000683:13619..19842+ >Blg00566.2 ID=Blg00566.2|Name=Blg00566.2|organism=Branchiostoma lanceolatum|type=CDS|length=939bp|location=Sequence derived from alignment at Sc0000683:13619..19842+ (Branchiostoma lanceolatum)
ATGGGAAGACCAGGTTTCTCACCGCGTGGAGGTGGCAGAGGTTTCTCACC
ACGTGGGGGCGGCAGAGGATTTTCACCACGTGGTGGTGGTGGTGGTTTCA
GAGGTGGAAGAGGAGGATTCGGTGACCGTGGAGGTAGAGGTGGCTTTAGA
GGCCGTGGTCGTGGCGGAGGCCGTGGTGGCAGAGGTGGTGGCAGGGGTGG
CTTTGGTGCAGGAAGAAAGGTGGTTGTCGAACCTCACAGGCATGCAGGAG
TGTTCATTTCACGAGGGAAGGAGGATGCCCTTGTCACCAAGAACATGGTG
GTTGGAGAGTCGGTGTATGGAGAGAAGAGGATAACAGTGGAGGAGGGGGA
GAACAAGTTGGAGTACCGTGTGTGGAACCCGTTCCGTTCAAAGTTGGCTG
CAGCCATCCTAGGTGGGATTGACCAGATCCACATGTTTCCTGGCACCAAG
GTCCTGTACCTGGGGGCTGCCTCAGGCACCACTGTCTCACACGTGTCCGA
CCTGGTGGGGCCGGAAGGGCTGGTGTATGCTGTAGAGTTCTCCCACAGGT
CAGGCCGAGATCTCCTCAACGTGGCCAAGAAGAGAACCAACATCATTCCA
ATCATAGAAGATGCCAGACACCCTCACAAGTACAGGATGTTAGTCGGTAT
GGTGGACACAATCTTTGCAGATGTTGCCCAGCCAGACCAGACCAGGATAG
TAGCAATCAACGCCCATAACTTCCTGAAGAATGATGGTCATTTTGTCATC
TCTATCAAGGCCAACTGTATTGACTCCACAGCATCAGCAGAGGCTGTGTT
TGCAGGTGAAGTTAAGAAGATGAAGTCAGAGAAGATGCACCCAAAAGAAC
AGCTGACATTGGAACCATACGAGAGGGACCATGCAGTTGTGGTAGGAGTG
TACAGGTCAGTGTCACTTGGTCTTAATAGACAGACGTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg00566.2-exon-Sc0000683-1570713199:13619..13864 | Blg00566.2-exon-Sc0000683-1570713199:13619..13864 | Branchiostoma lanceolatum | exon |
| Blg00566.2-exon-Sc0000683-1570713199:14549..14575 | Blg00566.2-exon-Sc0000683-1570713199:14549..14575 | Branchiostoma lanceolatum | exon |
| Blg00566.2-exon-Sc0000683-1570713199:14884..14910 | Blg00566.2-exon-Sc0000683-1570713199:14884..14910 | Branchiostoma lanceolatum | exon |
| Blg00566.2-exon-Sc0000683-1570713199:15139..15174 | Blg00566.2-exon-Sc0000683-1570713199:15139..15174 | Branchiostoma lanceolatum | exon |
| Blg00566.2-exon-Sc0000683-1570713199:15543..15578 | Blg00566.2-exon-Sc0000683-1570713199:15543..15578 | Branchiostoma lanceolatum | exon |
| Blg00566.2-exon-Sc0000683-1570713199:15962..16006 | Blg00566.2-exon-Sc0000683-1570713199:15962..16006 | Branchiostoma lanceolatum | exon |
| Blg00566.2-exon-Sc0000683-1570713199:16857..16919 | Blg00566.2-exon-Sc0000683-1570713199:16857..16919 | Branchiostoma lanceolatum | exon |
| Blg00566.2-exon-Sc0000683-1570713199:17056..17150 | Blg00566.2-exon-Sc0000683-1570713199:17056..17150 | Branchiostoma lanceolatum | exon |
| Blg00566.2-exon-Sc0000683-1570713199:17432..17602 | Blg00566.2-exon-Sc0000683-1570713199:17432..17602 | Branchiostoma lanceolatum | exon |
| Blg00566.2-exon-Sc0000683-1570713199:17901..18033 | Blg00566.2-exon-Sc0000683-1570713199:17901..18033 | Branchiostoma lanceolatum | exon |
| Blg00566.2-exon-Sc0000683-1570713199:18232..18344 | Blg00566.2-exon-Sc0000683-1570713199:18232..18344 | Branchiostoma lanceolatum | exon |
| Blg00566.2-exon-Sc0000683-1570713199:18690..19842 | Blg00566.2-exon-Sc0000683-1570713199:18690..19842 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000683 | genome | Sc0000683:13619..19842 + |
Properties
| Property Name | Value |
|---|
| GeneID | Blg00566 |
|
