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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000042:1744883..1749519+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg00563.4 ID=Blg00563.4|Name=Blg00563.4|organism=Branchiostoma lanceolatum|type=mRNA|length=4637bp|location=Sequence derived from alignment at Sc0000042:1744883..1749519+ (Branchiostoma lanceolatum)
GGGCAACTACCGATCCCCCCATTGTTATTGGTCCCGTTGCTATGGTTACC
CGGGACTCGAGCCAGCGACCTTGAGTTCCAGATAGAAAGTTATTCTCCAA
GCAGATGTTGGAAGGGGAGATCATAACGGTCTCTAAAGTCGCCCCGCTTT
CCTGGCTTGAACCTAAACGGGACAGGTGGGATAACGTGGCGATCTTCCCT
CCCACCATTGCTCGGAAGTTGTCACAAAAGGTCTTAACGCTAGACGTCTG
CATGCTTGTAAAGCTGACTCGAAGCATGATCATTTGTGATTGTGCTGTGT
TGCAAACCTTAGCAAAGAGATAATTAATTGCTTGCAGAAGCCCAATTTAT
AAGTTTTGTAAACTTACAAAACTTACTGAGTAGCTTGAGTAACTTTGGTA
TTGTGTATGTACAAGTTCATCATATCATTTCCATCAAAACATCTGCTTGG
AGACCACACATTAAAACCTTTTTATTGGTACCACACATAGAAAATGGCTT
GGTCCAACCCCCGTATGCAGTACTCTTGTGTGAGGAGGTACCGTGGTCCT
GTGAAGCTGGTGGTACTGGACTGGGCAGGGACCGTCATCGACTACGGGGT
GTGCGCGCCGGCACTGACCTTCTCTCAGATCTTCAAGAATGAAGGAGTCC
CCATCTCCAACGAGGAGGCAAGGGGGCCCATGGGAGCACACAAGAGGGTG
AGATTAGACAAACAACAAGCCTGTCTTGGCTGTCCAGCAAATAAGATTAC
TTACATCAAGGAGGGCCTGCATGCCCCTTTTACGTAGAGTGTAATTGGCC
CTTTAAATTTTACGTAGAGCGTTGCCGACCACTCCATAATTTAGCGTAGA
TCGTGGGGGGCTTTCTGAATTTAGTGTAGATCGTAGGGGCTTTCTGAATT
TAGCGTACTACGTAGCCGGCCCTCCCTATTTAGCGTAGAGCGTTGTCGGG
ACCCCCCCATGCAGGCCCTCATCAAGGAGGTTAACCTTTTGGACCCCAGA
TTGTTCAACATCAAGCAAATCATTCCTTCTTGATAAGGTGGGAGGAGCCT
GGTATCTAAACATATTATAGCTGCTGAGACTGTTTCGCCTTCTGCTCAAA
TAGGACAGGACGAAAGAGCCTTGGCAGCTGTAATATCTACATCTACCTTT
TGATACCCCCATATAGCCCCATCAGGGGCAAAGTAGGTGGGAGTTGAGGT
CCCGGGCTAAGGCAGGCAGGCCTCGGGCCTGGCACATAACGACTCAACGG
TGGGAGCCGTCACAACCGTGCCAGGCAGGGTATTCACTGAGGAAGTATGA
GTGTTTGTATGAATCAGTTCTTGCGTAGATAGTCTGAAACTTGAGGTGGA
GGCTCCCCCGCCATTCAGGAGAATAATAGGTTCAGATCGATGAGGCTAAG
TCTGGGGCAGACTGATGATGCCTGTTTCCCCCTCCGTTATCTATCAGGTT
CACATCCAGCGCGTTCTAGAGAACGAGAGCGTGAGGGGGCGGTGGATCCA
GAAGCACGGTGGACCCCCCACGGAGGAGGATGTGGATCGCATGTACGCCA
ACTTCGTCCCCATGCAGCTGTCCATCATGAAGAACTACTCCACCATGATA
CCAGGTCAGTTATTTGATTCAGGAACAAAGTTACTTTGTTCCTGAATCAA
ATAACTGACCTGGTATCATTTTAAGTTTGATGACAACTTTAATTTGTATT
TACAGTTAAGATTTCAAACATGCTGACTTATTTTAGTTTACAATCCAAGT
GGAGGTTAAACATGTTAAAGGAATGCATATGCAGATATGTTACTACTGAT
CAAAGTTCAGCATAAGCACAATGTGTTATTTGCTTTAGGAACAAAGTTCG
ATGACAATTTTATGTTTATAGTTATGATTTCAAGCATGTTGATTTGCTTT
GGTTACAAGCCTAGGGTTGGAGGTCAGAGTGATGCATACAGGTGATGACT
CAAGTGAAAAGGAGCACCTAGCTTTGGTTAAGGATGTTCTCCCAGATTGG
ACATAAAGCTTGAAGTCCCGTGTTTGATGAGAGAGCCACAACTCGAGCAA
GTTTAAGATCCCACCACACTTATCGCTAAGAGTAGGAGTTCATCCCGGTG
AGTAGATCAAACCTTACAGTCTGGTATTACACAGCTTGTACTTACTGTAC
AAAAACTGGTGTGGTATGCCTAAAGGTGACAAACAAACAAACAAACAAAA
CGTAAAGGATCTAAACCCTTGTCCCATCCCAGGTGCTGTGGAGACAGTGA
ACCATCTCAGAGAGAAGGGGATGAAGATCGGCTCCACGACCGGCTACACC
ACCCCCATCCTGGACGACCTCAAGCCGGTCGCCGCAAAGCAAGGCTATGA
GCCGGACTTCTACGCCGCGGCTGACATGGTCCCGCAGGCACGCCCTTGCC
CGTATATGGTGTGGCTGAACGCCATCAAACTTGACGTGCATCCCATTGAG
GCTGTTGTGAAGGTATGCAAGTTCTCTATTTCATTGATAGCCAGGGCTGT
CTCCAGCTTTACATTTTTTCGTCCCACTCGTTGTTTGGGAGCCAATGAAG
TTGATTTTCGTTACCAAATCTATTATTTTAAGCTACTCGTAATACAAAAA
TACATTTTCATCAACTACACGTGATGGAGTTCTGATTTTGGGGATGAACT
GAGTGAAATTTTTGTTCATCTCAACAAGCAAATTTCCATCCTGGGACAGA
GGGCTACTGGTCCTGGAGACAGCCTTGTTGATCACTTTACACCCTTTACA
TAGGTTAGTAGAAGCACACAAAAACACACATACGCACACAAGACAAGACA
AAAACAATACTCCACTCCCTTGGTGTAAAGTTAAAAGTCTGATTACATTG
GTATGTTCTGATATCATTACACAATGTGTCTCCCACAGGTAGATGACACA
GTGGACGGAGTAAAGGAGGGAACGTCAGCAGGATGCTGGGCCGTGGGCGT
GGCAAAAACGGTAGGTTTCCTACGAGTTCTGCAAATATGTATCTGAGCTA
ACCTTGAGTGCCATGCATATTCATCATTACCATATTTCTTTGTCAAAGAA
GATGATAATTCTTTGAACTGTATCTACAGTTAAACTGATCTGGGATTTAG
AGGTTCAAAAACTAGATTGATTTCTTTGATCTGCACTGTTCTGGGTATAC
AGTATATCCCAGCTAACTATGACCATATGTGGTATATTTACCATAATTGA
TATTTATCCCAACCATCATAGAAGACAAAGTTACACATTTATCCACATCG
AAACATATTTCGGATTTCTTTTTCTAAATGCCCAAAAACTGAATTTATAA
ATCCATCATCATTCATGAACATGACTTTTGACCCTTGACCCTGGTTGCTA
GGGTAACTACGTGGGAGCGACGGAGGAGGAGGTGGCGGCCATGAGCCAGG
GCGAGCTGGACAGGAAGCTGCAGCGCGCCTACGACACGCTGATCGACTCC
GGCGCTCACTACGTCATCGACAGCATCGTCGACCTGCCTGGTGTCATAGC
AGACATCAACCGCCGGTTAGCAGCAGGGGAGAGGCCTTGACTTTTTACAA
ACTATAGTGTGCAGCCAGCTTTTCAGTCGTTGGGACTGAATAGTCTTGAT
TTTGCACAGTATGTTTTAAAAACATTGTGATTAGAATATCCTCAGTGTTA
AAACAACACTGTTAAAATGATGTAGCATCATGCTAGACGAAAATATGACA
ACAGCAACAATAACTACTGTACGTAAAGATAGAGTTTTGAGGGCATCACA
TGGATGATAGTGTTCTTGTGATAAAGAAGTTTGTGTTTGTGTTTGATTTG
CTAGTTGGTGGTTTAAATGATCATGGACTTGCCAGATGTCATAGCAGACA
TCAACCGACGGTTAGCAGCAGGGGAGAGGCCTTGATTTCCCCATGACAAA
ACAACAGCTACCCTTTGCCCTAAGTCTTGATATTTGTTGATATTAGGTAT
TCTCCAAGCAGAGGCTTCGATCGAGAGGGATAGTTTTGACCGGGATTTTT
AACGTTCCTCTCATGAGAGGAGAGGAACGTTAAAAATCCCGGCCAAAACT
ACCCCTCTCGATCGAAGCCTCTGCTTGGAGAATAGATATTAGGTAGCAGG
GCATACACTAAGAATAGAAATCAGGTGCCCTTCCTTTTGCAGGGAACACC
CAGTCTCCCTGATCACACTGCGACTTTCGTTTTTTCCCTATACCAGACAC
TGGGACAGCATGAAAATTGATTGATGTGTAAAGCTACCAGATAATTGTGA
ATCCATAGAGCCCATTGGAAAAGTCTGGTCACCCCCACCCCCCAAATTTG
TGGATGCCCTGTCTATAAATCCTAGCTAAAAGCCTGCACTCAGTAAATGT
AGTGTCAACATATAGGTTTCTCAAGGAAAAATCTTAATGCTCAAACTAAC
TTGACTTTCTTCTTTGTTTTTCTGATAGCGTGATTGTTGTCTTAGCAGAA
TACAACTTGAGTTGATAATGATCAATGATAATGATCTGTGGTCTTCCTGA
ACACCTACATTTTATCTATAATGCCTTCTTGTTTTCTTTTGATTTGAAAT
TCTCTTCAGCTTCTCTGAGTGCTATAGCCTAGTATGATCACGGCAGAATG
ACAGCGCTTGTACAAAATTAATAAACATAATTGCTGC Coding sequence (CDS) from alignment at Sc0000042:1744883..1749519+ >Blg00563.4 ID=Blg00563.4|Name=Blg00563.4|organism=Branchiostoma lanceolatum|type=CDS|length=981bp|location=Sequence derived from alignment at Sc0000042:1744883..1749519+ (Branchiostoma lanceolatum)
ATGTTGGAAGGGGAGATCATAACGGTCTCTAAAGTCGCCCCGCTTTCCTG
GCTTGAACCTAAACGGGACAGGTGGGATAACGTGGCGATCTTCCCTCCCA
CCATTGCTCGGAAGTTGTCACAAAAGAAAATGGCTTGGTCCAACCCCCGT
ATGCAGTACTCTTGTGTGAGGAGGTACCGTGGTCCTGTGAAGCTGGTGGT
ACTGGACTGGGCAGGGACCGTCATCGACTACGGGGTGTGCGCGCCGGCAC
TGACCTTCTCTCAGATCTTCAAGAATGAAGGAGTCCCCATCTCCAACGAG
GAGGCAAGGGGGCCCATGGGAGCACACAAGAGGGTTCACATCCAGCGCGT
TCTAGAGAACGAGAGCGTGAGGGGGCGGTGGATCCAGAAGCACGGTGGAC
CCCCCACGGAGGAGGATGTGGATCGCATGTACGCCAACTTCGTCCCCATG
CAGCTGTCCATCATGAAGAACTACTCCACCATGATACCAGGTGCTGTGGA
GACAGTGAACCATCTCAGAGAGAAGGGGATGAAGATCGGCTCCACGACCG
GCTACACCACCCCCATCCTGGACGACCTCAAGCCGGTCGCCGCAAAGCAA
GGCTATGAGCCGGACTTCTACGCCGCGGCTGACATGGTCCCGCAGGCACG
CCCTTGCCCGTATATGGTGTGGCTGAACGCCATCAAACTTGACGTGCATC
CCATTGAGGCTGTTGTGAAGGTAGATGACACAGTGGACGGAGTAAAGGAG
GGAACGTCAGCAGGATGCTGGGCCGTGGGCGTGGCAAAAACGGGTAACTA
CGTGGGAGCGACGGAGGAGGAGGTGGCGGCCATGAGCCAGGGCGAGCTGG
ACAGGAAGCTGCAGCGCGCCTACGACACGCTGATCGACTCCGGCGCTCAC
TACGTCATCGACAGCATCGTCGACCTGCCTGGTGTCATAGCAGACATCAA
CCGCCGGTTAGCAGCAGGGGAGAGGCCTTGA
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg00563.4-exon-Sc0000042-1570713199:1744883..1745112 | Blg00563.4-exon-Sc0000042-1570713199:1744883..1745112 | Branchiostoma lanceolatum | exon |
| Blg00563.4-exon-Sc0000042-1570713199:1745373..1745579 | Blg00563.4-exon-Sc0000042-1570713199:1745373..1745579 | Branchiostoma lanceolatum | exon |
| Blg00563.4-exon-Sc0000042-1570713199:1746330..1746486 | Blg00563.4-exon-Sc0000042-1570713199:1746330..1746486 | Branchiostoma lanceolatum | exon |
| Blg00563.4-exon-Sc0000042-1570713199:1747115..1747344 | Blg00563.4-exon-Sc0000042-1570713199:1747115..1747344 | Branchiostoma lanceolatum | exon |
| Blg00563.4-exon-Sc0000042-1570713199:1747771..1747842 | Blg00563.4-exon-Sc0000042-1570713199:1747771..1747842 | Branchiostoma lanceolatum | exon |
| Blg00563.4-exon-Sc0000042-1570713199:1748234..1748415 | Blg00563.4-exon-Sc0000042-1570713199:1748234..1748415 | Branchiostoma lanceolatum | exon |
| Blg00563.4-exon-Sc0000042-1570713199:1748761..1748828 | Blg00563.4-exon-Sc0000042-1570713199:1748761..1748828 | Branchiostoma lanceolatum | exon |
| Blg00563.4-exon-Sc0000042-1570713199:1748975..1749519 | Blg00563.4-exon-Sc0000042-1570713199:1748975..1749519 | Branchiostoma lanceolatum | exon |
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000042 | genome | Sc0000042:1744883..1749519 + |
Properties
| Property Name | Value |
|---|
| GeneID | Blg00563 |
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