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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000042:1744813..1749106+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg00563.3 ID=Blg00563.3|Name=Blg00563.3|organism=Branchiostoma lanceolatum|type=mRNA|length=4294bp|location=Sequence derived from alignment at Sc0000042:1744813..1749106+ (Branchiostoma lanceolatum)
GAGTCTAAAGGTCGTTTCGCCGGTACATGTGCTGAGCACCGCGGATTGTG
AGGAAAGGGGTAAAATTCAAGGGCAACTACCGATCCCCCCATTGTTATTG
GTCCCGTTGCTATGGTTACCCGGGACTCGAGCCAGCGACCTTGAGTTCCA
GATAGAAAGTTATTCTCCAAGCAGATGTTGGAAGGGGAGATCATAACGGT
CTCTAAAGTCGCCCCGCTTTCCTGGCTTGAACCTAAACGGGACAGGTGGG
ATAACGTGGCGATCTTCCCTCCCACCATTGCTCGGAAGTTGTCACAAAAG
GTCTTAACGCTAGACGTCTGCATGCTTGTAAAGCTGACTCGAAGCATGAT
CATTTGTGATTGTGCTGTGTTGCAAACCTTAGCAAAGAGATAATTAATTG
CTTGCAGAAGCCCAATTTATAAGTTTTGTAAACTTACAAAACTTACTGAG
TAGCTTGAGTAACTTTGGTATTGTGTATGTACAAGTTCATCATATCATTT
CCATCAAAACATCTGCTTGGAGACCACACATTAAAACCTTTTTATTGGTA
CCACACATAGAAAATGGCTTGGTCCAACCCCCGTATGCAGTACTCTTGTG
TGAGGAGGTACCGTGGTCCTGTGAAGCTGGTGGTACTGGACTGGGCAGGG
ACCGTCATCGACTACGGGGTGTGCGCGCCGGCACTGACCTTCTCTCAGAT
CTTCAAGAATGAAGGAGTCCCCATCTCCAACGAGGAGGCAAGGGGGCCCA
TGGGAGCACACAAGAGGGTGAGATTAGACAAACAACAAGCCTGTCTTGGC
TGTCCAGCAAATAAGATTACTTACATCAAGGAGGGCCTGCATGCCCCTTT
TACGTAGAGTGTAATTGGCCCTTTAAATTTTACGTAGAGCGTTGCCGACC
ACTCCATAATTTAGCGTAGATCGTGGGGGGCTTTCTGAATTTAGTGTAGA
TCGTAGGGGCTTTCTGAATTTAGCGTACTACGTAGCCGGCCCTCCCTATT
TAGCGTAGAGCGTTGTCGGGACCCCCCCATGCAGGCCCTCATCAAGGAGG
TTAACCTTTTGGACCCCAGATTGTTCAACATCAAGCAAATCATTCCTTCT
TGATAAGGTGGGAGGAGCCTGGTATCTAAACATATTATAGCTGCTGAGAC
TGTTTCGCCTTCTGCTCAAATAGGACAGGACGAAAGAGCCTTGGCAGCTG
TAATATCTACATCTACCTTTTGATACCCCCATATAGCCCCATCAGGGGCA
AAGTAGGTGGGAGTTGAGGTCCCGGGCTAAGGCAGGCAGGCCTCGGGCCT
GGCACATAACGACTCAACGGTGGGAGCCGTCACAACCGTGCCAGGCAGGG
TATTCACTGAGGAAGTATGAGTGTTTGTATGAATCAGTTCTTGCGTAGAT
AGTCTGAAACTTGAGGTGGAGGCTCCCCCGCCATTCAGGAGAATAATAGG
TTCAGATCGATGAGGCTAAGTCTGGGGCAGACTGATGATGCCTGTTTCCC
CCTCCGTTATCTATCAGGTTCACATCCAGCGCGTTCTAGAGAACGAGAGC
GTGAGGGGGCGGTGGATCCAGAAGCACGGTGGACCCCCCACGGAGGAGGA
TGTGGATCGCATGTACGCCAACTTCGTCCCCATGCAGCTGTCCATCATGA
AGAACTACTCCACCATGATACCAGGTCAGTTATTTGATTCAGGAACAAAG
TTACTTTGTTCCTGAATCAAATAACTGACCTGGTATCATTTTAAGTTTGA
TGACAACTTTAATTTGTATTTACAGTTAAGATTTCAAACATGCTGACTTA
TTTTAGTTTACAATCCAAGTGGAGGTTAAACATGTTAAAGGAATGCATAT
GCAGATATGTTACTACTGATCAAAGTTCAGCATAAGCACAATGTGTTATT
TGCTTTAGGAACAAAGTTCGATGACAATTTTATGTTTATAGTTATGATTT
CAAGCATGTTGATTTGCTTTGGTTACAAGCCTAGGGTTGGAGGTCAGAGT
GATGCATACAGGTGATGACTCAAGTGAAAAGGAGCACCTAGCTTTGGTTA
AGGATGTTCTCCCAGATTGGACATAAAGCTTGAAGTCCCGTGTTTGATGA
GAGAGCCACAACTCGAGCAAGTTTAAGATCCCACCACACTTATCGCTAAG
AGTAGGAGTTCATCCCGGTGAGTAGATCAAACCTTACAGTCTGGTATTAC
ACAGCTTGTACTTACTGTACAAAAACTGGTGTGGTATGCCTAAAGGTGAC
AAACAAACAAACAAACAAAACGTAAAGGATCTAAACCCTTGTCCCATCCC
AGGTGCTGTGGAGACAGTGAACCATCTCAGAGAGAAGGGGATGAAGATCG
GCTCCACGACCGGCTACACCACCCCCATCCTGGACGACCTCAAGCCGGTC
GCCGCAAAGCAAGGCTATGAGCCGGACTTCTACGCCGCGGCTGACATGGT
CCCGCAGGCACGCCCTTGCCCGTATATGGTGTGGCTGAACGCCATCAAAC
TTGACGTGCATCCCATTGAGGCTGTTGTGAAGGTATGCAAGTTCTCTATT
TCATTGATAGCCAGGGCTGTCTCCAGCTTTACATTTTTTCGTCCCACTCG
TTGTTTGGGAGCCAATGAAGTTGATTTTCGTTACCAAATCTATTATTTTA
AGCTACTCGTAATACAAAAATACATTTTCATCAACTACACGTGATGGAGT
TCTGATTTTGGGGATGAACTGAGTGAAATTTTTGTTCATCTCAACAAGCA
AATTTCCATCCTGGGACAGAGGGCTACTGGTCCTGGAGACAGCCTTGTTG
ATCACTTTACACCCTTTACATAGGTTAGTAGAAGCACACAAAAACACACA
TACGCACACAAGACAAGACAAAAACAATACTCCACTCCCTTGGTGTAAAG
TTAAAAGTCTGATTACATTGGTATGTTCTGATATCATTACACAATGTGTC
TCCCACAGGTAGATGACACAGTGGACGGAGTAAAGGAGGGAACGTCAGCA
GGATGCTGGGCCGTGGGCGTGGCAAAAACGGTAGGTTTCCTACGAGTTCT
GCAAATATGTATCTGAGCTAACCTTGAGTGCCATGCATATTCATCATTAC
CATATTTCTTTGTCAAAGAAGATGATAATTCTTTGAACTGTATCTACAGT
TAAACTGATCTGGGATTTAGAGGTTCAAAAACTAGATTGATTTCTTTGAT
CTGCACTGTTCTGGGTATACAGTATATCCCAGCTAACTATGACCATATGT
GGTATATTTACCATAATTGATATTTATCCCAACCATCATAGAAGACAAAG
TTACACATTTATCCACATCGAAACATATTTCGGATTTCTTTTTCTAAATG
CCCAAAAACTGAATTTATAAATCCATCATCATTCATGAACATGACTTTTG
ACCCTTGACCCTGGTTGCTAGGGTAACTACGTGGGAGCGACGGAGGAGGA
GGTGGCGGCCATGAGCCAGGGCGAGCTGGACAGGAAGCTGCAGCGCGCCT
ACGACACGCTGATCGACTCCGGCGCTCACTACGTCATCGACAGCATCGTC
GACCTGCCTGGTGTCATAGCAGACATCAACCGCCGGTTAGCAGCAGGGGA
GAGGCCTTGACTTTTTACAAACTATAGTGTGCAGCCAGCTTTTCAGTCGT
TGGGACTGAATAGTCTTGATTTTGCACAGTATGTTTTAAAAACATTGTGA
TTAGAATATCCTCAGTGTTAAAACAACACTGTTAAAATGATGTAGCATCA
TGCTAGACGAAAATATGACAACAGCAACAATAACTACTGTACGTAAAGAT
AGAGTTTTGAGGGCATCACATGGATGATAGTGTTCTTGTGATAAAGAAGT
TTGTGTTTGTGTTTGATTTGCTAGTTGGTGGTTTAAATGATCATGGACTT
GCCAGATGTCATAGCAGACATCAACCGACGGTTAGCAGCAGGGGAGAGGC
CTTGATTTCCCCATGACAAAACAACAGCTACCCTTTGCCCTAAGTCTTGA
TATTTGTTGATATTAGGTATTCTCCAAGCAGAGGCTTCGATCGAGAGGGA
TAGTTTTGACCGGGATTTTTAACGTTCCTCTCATGAGAGGAGAGGAACGT
TAAAAATCCCGGCCAAAACTACCCCTCTCGATCGAAGCCTCTGCTTGGAG
AATAGATATTAGGTAGCAGGGCATACACTAAGAATAGAAATCAGGTGCCC
TTCCTTTTGCAGGGAACACCCAGTCTCCCTGATCACACTGCGACTTTCGT
TTTTTCCCTATACCAGACACTGGGACAGCATGAAAATTGATTGA Coding sequence (CDS) from alignment at Sc0000042:1744813..1749106+ >Blg00563.3 ID=Blg00563.3|Name=Blg00563.3|organism=Branchiostoma lanceolatum|type=CDS|length=852bp|location=Sequence derived from alignment at Sc0000042:1744813..1749106+ (Branchiostoma lanceolatum)
ATGGCTTGGTCCAACCCCCGTATGCAGTACTCTTGTGTGAGGAGGTACCG
TGGTCCTGTGAAGCTGGTGGTACTGGACTGGGCAGGGACCGTCATCGACT
ACGGGGTGTGCGCGCCGGCACTGACCTTCTCTCAGATCTTCAAGAATGAA
GGAGTCCCCATCTCCAACGAGGAGGCAAGGGGGCCCATGGGAGCACACAA
GAGGGTTCACATCCAGCGCGTTCTAGAGAACGAGAGCGTGAGGGGGCGGT
GGATCCAGAAGCACGGTGGACCCCCCACGGAGGAGGATGTGGATCGCATG
TACGCCAACTTCGTCCCCATGCAGCTGTCCATCATGAAGAACTACTCCAC
CATGATACCAGGTGCTGTGGAGACAGTGAACCATCTCAGAGAGAAGGGGA
TGAAGATCGGCTCCACGACCGGCTACACCACCCCCATCCTGGACGACCTC
AAGCCGGTCGCCGCAAAGCAAGGCTATGAGCCGGACTTCTACGCCGCGGC
TGACATGGTCCCGCAGGCACGCCCTTGCCCGTATATGGTGTGGCTGAACG
CCATCAAACTTGACGTGCATCCCATTGAGGCTGTTGTGAAGGTAGATGAC
ACAGTGGACGGAGTAAAGGAGGGAACGTCAGCAGGATGCTGGGCCGTGGG
CGTGGCAAAAACGGGTAACTACGTGGGAGCGACGGAGGAGGAGGTGGCGG
CCATGAGCCAGGGCGAGCTGGACAGGAAGCTGCAGCGCGCCTACGACACG
CTGATCGACTCCGGCGCTCACTACGTCATCGACAGCATCGTCGACCTGCC
TGGTGTCATAGCAGACATCAACCGCCGGTTAGCAGCAGGGGAGAGGCCTT
GA
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg00563.3-exon-Sc0000042-1570713199:1744813..1744871 | Blg00563.3-exon-Sc0000042-1570713199:1744813..1744871 | Branchiostoma lanceolatum | exon |
| Blg00563.3-exon-Sc0000042-1570713199:1745373..1745579 | Blg00563.3-exon-Sc0000042-1570713199:1745373..1745579 | Branchiostoma lanceolatum | exon |
| Blg00563.3-exon-Sc0000042-1570713199:1746330..1746486 | Blg00563.3-exon-Sc0000042-1570713199:1746330..1746486 | Branchiostoma lanceolatum | exon |
| Blg00563.3-exon-Sc0000042-1570713199:1747115..1747344 | Blg00563.3-exon-Sc0000042-1570713199:1747115..1747344 | Branchiostoma lanceolatum | exon |
| Blg00563.3-exon-Sc0000042-1570713199:1747771..1747842 | Blg00563.3-exon-Sc0000042-1570713199:1747771..1747842 | Branchiostoma lanceolatum | exon |
| Blg00563.3-exon-Sc0000042-1570713199:1748234..1748415 | Blg00563.3-exon-Sc0000042-1570713199:1748234..1748415 | Branchiostoma lanceolatum | exon |
| Blg00563.3-exon-Sc0000042-1570713199:1748761..1748828 | Blg00563.3-exon-Sc0000042-1570713199:1748761..1748828 | Branchiostoma lanceolatum | exon |
| Blg00563.3-exon-Sc0000042-1570713199:1748975..1749106 | Blg00563.3-exon-Sc0000042-1570713199:1748975..1749106 | Branchiostoma lanceolatum | exon |
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000042 | genome | Sc0000042:1744813..1749106 + |
Properties
| Property Name | Value |
|---|
| GeneID | Blg00563 |
|
