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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000042:1745077..1749106+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg00563.2 ID=Blg00563.2|Name=Blg00563.2|organism=Branchiostoma lanceolatum|type=mRNA|length=4030bp|location=Sequence derived from alignment at Sc0000042:1745077..1749106+ (Branchiostoma lanceolatum)
TTCCCTCCCACCATTGCTCGGAAGTTGTCACAAAAGGTCTTAACGCTAGA
CGTCTGCATGCTTGTAAAGCTGACTCGAAGCATGATCATTTGTGATTGTG
CTGTGTTGCAAACCTTAGCAAAGAGATAATTAATTGCTTGCAGAAGCCCA
ATTTATAAGTTTTGTAAACTTACAAAACTTACTGAGTAGCTTGAGTAACT
TTGGTATTGTGTATGTACAAGTTCATCATATCATTTCCATCAAAACATCT
GCTTGGAGACCACACATTAAAACCTTTTTATTGGTACCACACATAGAAAA
TGGCTTGGTCCAACCCCCGTATGCAGTACTCTTGTGTGAGGAGGTACCGT
GGTCCTGTGAAGCTGGTGGTACTGGACTGGGCAGGGACCGTCATCGACTA
CGGGGTGTGCGCGCCGGCACTGACCTTCTCTCAGATCTTCAAGAATGAAG
GAGTCCCCATCTCCAACGAGGAGGCAAGGGGGCCCATGGGAGCACACAAG
AGGGTGAGATTAGACAAACAACAAGCCTGTCTTGGCTGTCCAGCAAATAA
GATTACTTACATCAAGGAGGGCCTGCATGCCCCTTTTACGTAGAGTGTAA
TTGGCCCTTTAAATTTTACGTAGAGCGTTGCCGACCACTCCATAATTTAG
CGTAGATCGTGGGGGGCTTTCTGAATTTAGTGTAGATCGTAGGGGCTTTC
TGAATTTAGCGTACTACGTAGCCGGCCCTCCCTATTTAGCGTAGAGCGTT
GTCGGGACCCCCCCATGCAGGCCCTCATCAAGGAGGTTAACCTTTTGGAC
CCCAGATTGTTCAACATCAAGCAAATCATTCCTTCTTGATAAGGTGGGAG
GAGCCTGGTATCTAAACATATTATAGCTGCTGAGACTGTTTCGCCTTCTG
CTCAAATAGGACAGGACGAAAGAGCCTTGGCAGCTGTAATATCTACATCT
ACCTTTTGATACCCCCATATAGCCCCATCAGGGGCAAAGTAGGTGGGAGT
TGAGGTCCCGGGCTAAGGCAGGCAGGCCTCGGGCCTGGCACATAACGACT
CAACGGTGGGAGCCGTCACAACCGTGCCAGGCAGGGTATTCACTGAGGAA
GTATGAGTGTTTGTATGAATCAGTTCTTGCGTAGATAGTCTGAAACTTGA
GGTGGAGGCTCCCCCGCCATTCAGGAGAATAATAGGTTCAGATCGATGAG
GCTAAGTCTGGGGCAGACTGATGATGCCTGTTTCCCCCTCCGTTATCTAT
CAGGTTCACATCCAGCGCGTTCTAGAGAACGAGAGCGTGAGGGGGCGGTG
GATCCAGAAGCACGGTGGACCCCCCACGGAGGAGGATGTGGATCGCATGT
ACGCCAACTTCGTCCCCATGCAGCTGTCCATCATGAAGAACTACTCCACC
ATGATACCAGGTCAGTTATTTGATTCAGGAACAAAGTTACTTTGTTCCTG
AATCAAATAACTGACCTGGTATCATTTTAAGTTTGATGACAACTTTAATT
TGTATTTACAGTTAAGATTTCAAACATGCTGACTTATTTTAGTTTACAAT
CCAAGTGGAGGTTAAACATGTTAAAGGAATGCATATGCAGATATGTTACT
ACTGATCAAAGTTCAGCATAAGCACAATGTGTTATTTGCTTTAGGAACAA
AGTTCGATGACAATTTTATGTTTATAGTTATGATTTCAAGCATGTTGATT
TGCTTTGGTTACAAGCCTAGGGTTGGAGGTCAGAGTGATGCATACAGGTG
ATGACTCAAGTGAAAAGGAGCACCTAGCTTTGGTTAAGGATGTTCTCCCA
GATTGGACATAAAGCTTGAAGTCCCGTGTTTGATGAGAGAGCCACAACTC
GAGCAAGTTTAAGATCCCACCACACTTATCGCTAAGAGTAGGAGTTCATC
CCGGTGAGTAGATCAAACCTTACAGTCTGGTATTACACAGCTTGTACTTA
CTGTACAAAAACTGGTGTGGTATGCCTAAAGGTGACAAACAAACAAACAA
ACAAAACGTAAAGGATCTAAACCCTTGTCCCATCCCAGGTGCTGTGGAGA
CAGTGAACCATCTCAGAGAGAAGGGGATGAAGATCGGCTCCACGACCGGC
TACACCACCCCCATCCTGGACGACCTCAAGCCGGTCGCCGCAAAGCAAGG
CTATGAGCCGGACTTCTACGCCGCGGCTGACATGGTCCCGCAGGCACGCC
CTTGCCCGTATATGGTGTGGCTGAACGCCATCAAACTTGACGTGCATCCC
ATTGAGGCTGTTGTGAAGGTATGCAAGTTCTCTATTTCATTGATAGCCAG
GGCTGTCTCCAGCTTTACATTTTTTCGTCCCACTCGTTGTTTGGGAGCCA
ATGAAGTTGATTTTCGTTACCAAATCTATTATTTTAAGCTACTCGTAATA
CAAAAATACATTTTCATCAACTACACGTGATGGAGTTCTGATTTTGGGGA
TGAACTGAGTGAAATTTTTGTTCATCTCAACAAGCAAATTTCCATCCTGG
GACAGAGGGCTACTGGTCCTGGAGACAGCCTTGTTGATCACTTTACACCC
TTTACATAGGTTAGTAGAAGCACACAAAAACACACATACGCACACAAGAC
AAGACAAAAACAATACTCCACTCCCTTGGTGTAAAGTTAAAAGTCTGATT
ACATTGGTATGTTCTGATATCATTACACAATGTGTCTCCCACAGGTAGAT
GACACAGTGGACGGAGTAAAGGAGGGAACGTCAGCAGGATGCTGGGCCGT
GGGCGTGGCAAAAACGGTAGGTTTCCTACGAGTTCTGCAAATATGTATCT
GAGCTAACCTTGAGTGCCATGCATATTCATCATTACCATATTTCTTTGTC
AAAGAAGATGATAATTCTTTGAACTGTATCTACAGTTAAACTGATCTGGG
ATTTAGAGGTTCAAAAACTAGATTGATTTCTTTGATCTGCACTGTTCTGG
GTATACAGTATATCCCAGCTAACTATGACCATATGTGGTATATTTACCAT
AATTGATATTTATCCCAACCATCATAGAAGACAAAGTTACACATTTATCC
ACATCGAAACATATTTCGGATTTCTTTTTCTAAATGCCCAAAAACTGAAT
TTATAAATCCATCATCATTCATGAACATGACTTTTGACCCTTGACCCTGG
TTGCTAGGGTAACTACGTGGGAGCGACGGAGGAGGAGGTGGCGGCCATGA
GCCAGGGCGAGCTGGACAGGAAGCTGCAGCGCGCCTACGACACGCTGATC
GACTCCGGCGCTCACTACGTCATCGACAGCATCGTCGACCTGCCTGGTGT
CATAGCAGACATCAACCGCCGGTTAGCAGCAGGGGAGAGGCCTTGACTTT
TTACAAACTATAGTGTGCAGCCAGCTTTTCAGTCGTTGGGACTGAATAGT
CTTGATTTTGCACAGTATGTTTTAAAAACATTGTGATTAGAATATCCTCA
GTGTTAAAACAACACTGTTAAAATGATGTAGCATCATGCTAGACGAAAAT
ATGACAACAGCAACAATAACTACTGTACGTAAAGATAGAGTTTTGAGGGC
ATCACATGGATGATAGTGTTCTTGTGATAAAGAAGTTTGTGTTTGTGTTT
GATTTGCTAGTTGGTGGTTTAAATGATCATGGACTTGCCAGATGTCATAG
CAGACATCAACCGACGGTTAGCAGCAGGGGAGAGGCCTTGATTTCCCCAT
GACAAAACAACAGCTACCCTTTGCCCTAAGTCTTGATATTTGTTGATATT
AGGTATTCTCCAAGCAGAGGCTTCGATCGAGAGGGATAGTTTTGACCGGG
ATTTTTAACGTTCCTCTCATGAGAGGAGAGGAACGTTAAAAATCCCGGCC
AAAACTACCCCTCTCGATCGAAGCCTCTGCTTGGAGAATAGATATTAGGT
AGCAGGGCATACACTAAGAATAGAAATCAGGTGCCCTTCCTTTTGCAGGG
AACACCCAGTCTCCCTGATCACACTGCGACTTTCGTTTTTTCCCTATACC
AGACACTGGGACAGCATGAAAATTGATTGA Coding sequence (CDS) from alignment at Sc0000042:1745077..1749106+ >Blg00563.2 ID=Blg00563.2|Name=Blg00563.2|organism=Branchiostoma lanceolatum|type=CDS|length=861bp|location=Sequence derived from alignment at Sc0000042:1745077..1749106+ (Branchiostoma lanceolatum)
ATGCTTAAAATGGCTTGGTCCAACCCCCGTATGCAGTACTCTTGTGTGAG
GAGGTACCGTGGTCCTGTGAAGCTGGTGGTACTGGACTGGGCAGGGACCG
TCATCGACTACGGGGTGTGCGCGCCGGCACTGACCTTCTCTCAGATCTTC
AAGAATGAAGGAGTCCCCATCTCCAACGAGGAGGCAAGGGGGCCCATGGG
AGCACACAAGAGGGTTCACATCCAGCGCGTTCTAGAGAACGAGAGCGTGA
GGGGGCGGTGGATCCAGAAGCACGGTGGACCCCCCACGGAGGAGGATGTG
GATCGCATGTACGCCAACTTCGTCCCCATGCAGCTGTCCATCATGAAGAA
CTACTCCACCATGATACCAGGTGCTGTGGAGACAGTGAACCATCTCAGAG
AGAAGGGGATGAAGATCGGCTCCACGACCGGCTACACCACCCCCATCCTG
GACGACCTCAAGCCGGTCGCCGCAAAGCAAGGCTATGAGCCGGACTTCTA
CGCCGCGGCTGACATGGTCCCGCAGGCACGCCCTTGCCCGTATATGGTGT
GGCTGAACGCCATCAAACTTGACGTGCATCCCATTGAGGCTGTTGTGAAG
GTAGATGACACAGTGGACGGAGTAAAGGAGGGAACGTCAGCAGGATGCTG
GGCCGTGGGCGTGGCAAAAACGGGTAACTACGTGGGAGCGACGGAGGAGG
AGGTGGCGGCCATGAGCCAGGGCGAGCTGGACAGGAAGCTGCAGCGCGCC
TACGACACGCTGATCGACTCCGGCGCTCACTACGTCATCGACAGCATCGT
CGACCTGCCTGGTGTCATAGCAGACATCAACCGCCGGTTAGCAGCAGGGG
AGAGGCCTTGA
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg00563.2-exon-Sc0000042-1570713199:1745077..1745139 | Blg00563.2-exon-Sc0000042-1570713199:1745077..1745139 | Branchiostoma lanceolatum | exon |
| Blg00563.2-exon-Sc0000042-1570713199:1745373..1745579 | Blg00563.2-exon-Sc0000042-1570713199:1745373..1745579 | Branchiostoma lanceolatum | exon |
| Blg00563.2-exon-Sc0000042-1570713199:1746330..1746486 | Blg00563.2-exon-Sc0000042-1570713199:1746330..1746486 | Branchiostoma lanceolatum | exon |
| Blg00563.2-exon-Sc0000042-1570713199:1747115..1747344 | Blg00563.2-exon-Sc0000042-1570713199:1747115..1747344 | Branchiostoma lanceolatum | exon |
| Blg00563.2-exon-Sc0000042-1570713199:1747771..1747842 | Blg00563.2-exon-Sc0000042-1570713199:1747771..1747842 | Branchiostoma lanceolatum | exon |
| Blg00563.2-exon-Sc0000042-1570713199:1748234..1748415 | Blg00563.2-exon-Sc0000042-1570713199:1748234..1748415 | Branchiostoma lanceolatum | exon |
| Blg00563.2-exon-Sc0000042-1570713199:1748761..1748828 | Blg00563.2-exon-Sc0000042-1570713199:1748761..1748828 | Branchiostoma lanceolatum | exon |
| Blg00563.2-exon-Sc0000042-1570713199:1748975..1749106 | Blg00563.2-exon-Sc0000042-1570713199:1748975..1749106 | Branchiostoma lanceolatum | exon |
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000042 | genome | Sc0000042:1745077..1749106 + |
Properties
| Property Name | Value |
|---|
| GeneID | Blg00563 |
|
